Information In Noncoding For ENCR40010014

Accession Number:  ENCR40010014	Category:   non-coding element
Cross-Ref:   Nondisruptable_sequence_ID: Gap_0055	Description:   upstream of CCNA_02097
Organism:   Caulobacter crescentus	RefSeq:   NC_011916
Condition:   Rich medium	locus_tag:   -
Date:   2018/11/11	Reference:   Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:541.

Nucleotide sequence:   CUUUGGCCUGCGGCGUCACGAAAUCUUCUCGCAACUGCGAAAUCCGCGUGAUUUCCGGUAGCGAAUUUGUGAUCGAAGUUUUACUGUAGAGACACCGGCGGCUCUCCACGCCGGUAUCAUCCGUCGCGAAGCGCCAAAAGACGCCUGCCGGUUCCCUAGCGAACCCAUCGGCAAGCGAAAAGGCCCCCCGACGGAAGACG

Molecular structure In Noncoding For ENCR40010014

Results for minimum free energy prediction

The optimal secondary structure in dot-bracket notation with a minimum free energy of -70.5 kcal/mol is given below.

.......(((((((((((((((......((((.((((.((((((.....)))))))))).)))).))))))).))........)))))).((.(((((((........))))))).)).(((((((......(((......(((.(((((((((......)))))....)))).)))....)))....)))))))..... (-70.50) [ VIEW IN FORNA ]

Results for thermodynamic ensemble prediction

The free energy of the thermodynamic ensemble is -72.53 kcal/mol.

The frequency of the MFE structure in the ensemble is 3.71 %.

The ensemble diversity is 28.58

.,,,,{{({(((({((((((((,,....((((.((((.((((((.....)))))))))).))))}))))))),}}..{,....}},,,),|{.(((((((........))))))).}|.(((((((......(((......(((.(((((((((......)))))....)))).)))....)))....))))))).,... [-72.53]

The centroid secondary structure in dot-bracket notation with a minimum free energy of -63.90 kcal/mol is given below.

...............(((((((......((((.((((.((((((.....)))))))))).)))).)))))))..................((.(((((((........))))))).)).(((((((......(((......(((.(((((((((......)))))....)))).)))....)))....)))))))..... {-63.90 d=19.27} [ VIEW IN FORNA ]