| Accession Number: ENCR40010026 |
Category: tRNA |
| Cross-Ref: Nondisruptable_sequence_ID: CCNA_99988 |
Description: tRNA (GUC) (CCNA_R0015) |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:553. |
| Nucleotide sequence: GCUUGCGCAGUCCGCGAGCCGCCGCUAUACCCCCACACCUUCCCGGCCGGGACGUCUUCACGAAGACGCUUCGGAUCGCUUCGGCGGACGCGUAGCUCAGCGGGAGAGCACUACGUUGACAUCGUAGGGGUCACAGGUUCAAUCCCUGUCGCGUCCACCAUUCC |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -55.4 kcal/mol is given below. |
|
(((((((.....)))))))........................((((((((.((((((....)))))).))))).)))....((.(((((((..((((.......)))).(((((.......))))).....(((((.......)))))))))))).)).....
(-55.40)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -57.06 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 6.74 %. |
| The ensemble diversity is 38.98 |
|
(((((((.....))))))).{{{{...................{||(((((.((((((....)))))).))))).}})...,||}(((((((..((((.......}}}}.(({{(..,....}}}}},.,,.(((((.......)))))))))))).},.....
[-57.06] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -49.70 kcal/mol is given below. |
|
(((((((.....)))))))...........................(((((.((((((....)))))).)))))...........(((((((..((((.......)))).(((((.......))))).....(((((.......))))))))))))........
{-49.70 d=25.16}
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|