Information In Noncoding For ENCR40010035

Accession Number:  ENCR40010035	Category:   non-coding element
Cross-Ref:   Nondisruptable_sequence_ID: Gap_0074	Description:   nondisruptable intergenic region
Organism:   Caulobacter crescentus	RefSeq:   NC_011916
Condition:   Rich medium	locus_tag:   -
Date:   2018/11/11	Reference:   Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:562.

Nucleotide sequence:   CCUAAAGCAAUAACAGAGCGGCGAAUCGCGUUAAAAUCUCCGCUAUCUACUAAAGAAGCACGCCGCAGUAACAAAGUUAUCCGAAAUAUAUCCUUGGAUUUAUCAAUUCUAUUUGGAAAGAUUCACGACCAUUUCAAC

Molecular structure In Noncoding For ENCR40010035

Results for minimum free energy prediction

The optimal secondary structure in dot-bracket notation with a minimum free energy of -19.5 kcal/mol is given below.

.................((((((....(((..........)))..(((.....)))....)))))).(((((...)))))..(((((...((..(((((((.((((......))))..))))))).))..)))))... (-19.50) [ VIEW IN FORNA ]

Results for thermodynamic ensemble prediction

The free energy of the thermodynamic ensemble is -21.61 kcal/mol.

The frequency of the MFE structure in the ensemble is 3.25 %.

The ensemble diversity is 17.62

.................((((((....{{{..........,||,.(((.....)))}}}.)))))).{{{{{...)))}}..(((((...{(..(((((((.((((......))))..))))))).)}..)))))... [-21.61]

The centroid secondary structure in dot-bracket notation with a minimum free energy of -15.80 kcal/mol is given below.

.................((((((......................(((.....)))....)))))).(((((...)))))..(((((...((..(((((((.((((......))))..))))))).))..)))))... {-15.80 d=12.14} [ VIEW IN FORNA ]