| Accession Number: ENCR40010049 |
Category: tRNA |
| Cross-Ref: Nondisruptable_sequence_ID: CCNA_99957; Rfam: RF00005 |
Description: tRNA (ACC) (CCNA_R0059) |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:576. |
| Nucleotide sequence: GCUUGGCGUUCGCGAUUCUCCUCGCUAUACGCCCCCUCCUCGUCGCCGCCGUAGCUCAGUGGUAGAGCGCAUCCUUGGUAAGGCUGAGGUCGGCAGUUCAAUCCUGCCCGGCGGCACCAUGG |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -44.9 kcal/mol is given below. |
|
....(((((..((((......))))...)))))........((.(((((((..((((.......))))....(((((((...)))))))..(((((.......)))))))))))))).....
(-44.90)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -46.63 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 6.07 %. |
| The ensemble diversity is 14.53 |
|
....(((((..((((......))))...)))))....,,..((.(((((((..((((.......}}}),,..(((((((...)))))))..(((((.......))))))))))))}}...)}
[-46.63] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -44.90 kcal/mol is given below. |
|
....(((((..((((......))))...)))))........((.(((((((..((((.......))))....(((((((...)))))))..(((((.......)))))))))))))).....
{-44.90 d=10.32}
[ VIEW IN FORNA ]
|