| Accession Number: ENCR40010063 |
Category: non-coding element |
| Cross-Ref: Nondisruptable_sequence_ID: Gap_0046 |
Description: upstream of CCNA_01750 |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:590. |
| Nucleotide sequence: UCUUCAGGUUCGCAUUGUUCGCGAACCGGAGUAUUUCCGCCGCGCCGCACGGGCUCUUGCCAUCGUGCGCGCGGCGGUUUUCGUUUGAGGCCAAGAUUCGCGGAGGCGCGGAG |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -56 kcal/mol is given below. |
|
.((((.(((((((.......))))))))))).....(((((((((.((((((((....)))..))))))))))))))...................((((((....)))))).
(-56.00)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -58.01 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 3.85 %. |
| The ensemble diversity is 14.29 |
|
.((((.(((((((.......)))))))}))}.....(((((((({{((((((((....)))..)))))))))))))).,{{,....}}}},,,,,.((((((....)))))).
[-58.01] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -56.00 kcal/mol is given below. |
|
.((((.(((((((.......))))))))))).....(((((((((.((((((((....)))..))))))))))))))...................((((((....)))))).
{-56.00 d=9.44}
[ VIEW IN FORNA ]
|