Information In Noncoding For ENCR40010064

Accession Number:  ENCR40010064	Category:   non-coding element
Cross-Ref:   Nondisruptable_sequence_ID: Gap_0063	Description:   nondisruptable intergenic region
Organism:   Caulobacter crescentus	RefSeq:   NC_011916
Condition:   Rich medium	locus_tag:   -
Date:   2018/11/11	Reference:   Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:591.

Nucleotide sequence:   CAAAACGGUUUUCCGGAUUUCGGGGCGGUUUUUCCCUACCAAAGAGAAAAACCAUGCUGCAUUGCAGCAAGGCAACAAAACGCGGGUCUUUGAAGAAAGGCGCCUGUCUGCAC

Molecular structure In Noncoding For ENCR40010064

Results for minimum free energy prediction

The optimal secondary structure in dot-bracket notation with a minimum free energy of -33.1 kcal/mol is given below.

.....(((....))).......((((((((((((.((.....)).)))))))).((((((...))))))..((........))..((((((....))))))))))........ (-33.10) [ VIEW IN FORNA ]

Results for thermodynamic ensemble prediction

The free energy of the thermodynamic ensemble is -34.88 kcal/mol.

The frequency of the MFE structure in the ensemble is 5.53 %.

The ensemble diversity is 18.08

.....{{(....|||,....,,||{{((((((((.((.....)).)))))))).((((((...))))))..((........)){{((((((....))))))}))})}}},... [-34.88]

The centroid secondary structure in dot-bracket notation with a minimum free energy of -27.30 kcal/mol is given below.

.....(((....)))...........((((((((.((.....)).)))))))).((((((...))))))..((........))..((((((....))))))............ {-27.30 d=11.85} [ VIEW IN FORNA ]