| Accession Number: ENCR40010067 |
Category: tRNA |
| Cross-Ref: Nondisruptable_sequence_ID: CCNA_99975; Rfam: RF00005 |
Description: tRNA (CCC) (CCNA_R0035) |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:594. |
| Nucleotide sequence: GUCGGAGCGUGGCGCAGCCUGGUAGCGCACUUGACUGGGGGUCAAGGGGUCGCAGGUUCGAAUCCUGUCGCUCCGACCAUUUCCUUCGGGAAUAUGCGGAAGAUGAAAGG |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -40.6 kcal/mol is given below. |
|
(((((((((.((((.((((((...((...(((((((...)))))))..))..))))))))...))...)))))))))(((((..((((........))))))))).....
(-40.60)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -42.58 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 4.01 %. |
| The ensemble diversity is 19.92 |
|
(((((((((.((((.((((({.,.((...(((((((...)))))))..)}.}))))))))...)),,.)))))))))(((((,{{{((........})))})))).....
[-42.58] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -37.90 kcal/mol is given below. |
|
(((((((((.((((.((((((...((...(((((((...)))))))..))..))))))))...))...)))))))))((((....(((........)))..)))).....
{-37.90 d=13.49}
[ VIEW IN FORNA ]
|