Information In Noncoding For ENCR40010071

Accession Number:  ENCR40010071 Category:   non-coding element
Cross-Ref:   Nondisruptable_sequence_ID: Gap_0018 Description:   nondisruptable intergenic region
Organism:   Caulobacter crescentus RefSeq:   NC_011916
Condition:   Rich medium locus_tag:   -
Date:   2018/11/11 Reference:   Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:598.
Nucleotide sequence:   GCUCGGUCUGGGCAAUCUAGAUAAAAACUAGAAGAGUUUUGGUAUAUAUUCUGUAGCUUUUGAAAGCAAUGUUACUAGUCCAAGAAUAAGUAUUCCAAGGGCUGAUGA


Molecular structure In Noncoding For ENCR40010071

Results for minimum free energy prediction

The optimal secondary structure in dot-bracket notation with a minimum free energy of -21 kcal/mol is given below.
((((.....))))..(((((.......)))))(((((..........)))))(((((..(((....))).)))))((((((..((((....))))...)))))).... (-21.00) [ VIEW IN FORNA ]

Results for thermodynamic ensemble prediction

The free energy of the thermodynamic ensemble is -23.45 kcal/mol.
The frequency of the MFE structure in the ensemble is 1.88 %.
The ensemble diversity is 38.15
((((,,,,{||}}..{|{{{,......||}}}..|||||{((,{(,{{(((((((((,.{((....}}}.))))}.,,,...))))),.,})},))},))))),.... [-23.45]


The centroid secondary structure in dot-bracket notation with a minimum free energy of -13.10 kcal/mol is given below.
((((.....))))..(((((.......)))))........((.....((((((((((..(((....))).))))).......))))).......))............ {-13.10 d=26.61} [ VIEW IN FORNA ]