Information In Noncoding For ENCR40010077

Accession Number:  ENCR40010077	Category:   non-coding element
Cross-Ref:   Nondisruptable_sequence_ID: Gap_0043	Description:   nondisruptable intergenic region
Organism:   Caulobacter crescentus	RefSeq:   NC_011916
Condition:   Rich medium	locus_tag:   -
Date:   2018/11/11	Reference:   Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:604.

Nucleotide sequence:   AUUAUGUCCGCUCUAUCGUAUCCAUCAGAAAUAUAAUUUAAAUAUGUUGUCGACGUGCGGCGAAAAUGGGCGCACCAUAACUAAGUAAAAAUUUCGCUUUAGUC

Molecular structure In Noncoding For ENCR40010077

Results for minimum free energy prediction

The optimal secondary structure in dot-bracket notation with a minimum free energy of -15.2 kcal/mol is given below.

..((((..(((((..((((...(((..((((((((.......)))))).))...)))..))))....)))))...))))(((((((.........)).))))). (-15.20) [ VIEW IN FORNA ]

Results for thermodynamic ensemble prediction

The free energy of the thermodynamic ensemble is -18.29 kcal/mol.

The frequency of the MFE structure in the ensemble is 0.66 %.

The ensemble diversity is 17.22

..(((({.(((((..((((...{{(..((((((((.......)))))).))...}})..))))....))))).},})))(((((((.,.....,.))}}}))). [-18.29]

The centroid secondary structure in dot-bracket notation with a minimum free energy of -13.40 kcal/mol is given below.

..(((((.(((((..((((...((...((((((((.......)))))).))....))..))))....))))).).))))(((((((.........))).)))). {-13.40 d=11.32} [ VIEW IN FORNA ]