Information In Noncoding For ENCR40010092

Accession Number:  ENCR40010092	Category:   non-coding element
Cross-Ref:   Nondisruptable_sequence_ID: Gap_0061	Description:   nondisruptable intergenic region
Organism:   Caulobacter crescentus	RefSeq:   NC_011916
Condition:   Rich medium	locus_tag:   -
Date:   2018/11/11	Reference:   Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:619.

Nucleotide sequence:   CCCGGGGGCGCUUGAUGACACCGGUAUCAGGACUGAUGCUGGAGCGAGGCCCGGGCUUUUUCAAGCCGAAACCGGGUUCGUCCGUCUGGAAGAAAAAGG

Molecular structure In Noncoding For ENCR40010092

Results for minimum free energy prediction

The optimal secondary structure in dot-bracket notation with a minimum free energy of -40.5 kcal/mol is given below.

(((((((((.((((......(((((((((....)))))))))..)))))))).(((((....)))))....)))))(((.(((....))).)))..... (-40.50) [ VIEW IN FORNA ]

Results for thermodynamic ensemble prediction

The free energy of the thermodynamic ensemble is -41.19 kcal/mol.

The frequency of the MFE structure in the ensemble is 32.76 %.

The ensemble diversity is 4.03

(((((((((.((((......(((((((((....)))))))))..)))))))).(((((....)))))....)))))(((.(((....))).)))..... [-41.19]

The centroid secondary structure in dot-bracket notation with a minimum free energy of -40.50 kcal/mol is given below.

(((((((((.((((......(((((((((....)))))))))..)))))))).(((((....)))))....)))))(((.(((....))).)))..... {-40.50 d=2.30} [ VIEW IN FORNA ]