Information In Noncoding For ENCR40010096

Accession Number:  ENCR40010096	Category:   non-coding element
Cross-Ref:   Nondisruptable_sequence_ID: Gap_0035	Description:   nondisruptable intergenic region
Organism:   Caulobacter crescentus	RefSeq:   NC_011916
Condition:   Rich medium	locus_tag:   -
Date:   2018/11/11	Reference:   Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:623.

Nucleotide sequence:   CUGUGCCCUCAAGCGACGGAAACCGGUGUCGCAAUCGGGGCGGGAGGGGUUUCGCUCCACCCGUCGAUGUCGAUCAUGAACGCGGCGCGGCUGCGAAU

Molecular structure In Noncoding For ENCR40010096

Results for minimum free energy prediction

The optimal secondary structure in dot-bracket notation with a minimum free energy of -38.9 kcal/mol is given below.

....(((((...((((((........))))))....)))))(((.(((((...))))).)))((((....))))......((((((...))))))... (-38.90) [ VIEW IN FORNA ]

Results for thermodynamic ensemble prediction

The free energy of the thermodynamic ensemble is -39.64 kcal/mol.

The frequency of the MFE structure in the ensemble is 30.15 %.

The ensemble diversity is 16.87

....(((((...((((((........))))))....)))))(((.(((((...))))).))){{{(.,..}}))......((((((...))))))... [-39.64]

The centroid secondary structure in dot-bracket notation with a minimum free energy of -37.50 kcal/mol is given below.

....(((((...((((((........))))))....)))))(((.(((((...))))).))).(((....))).......((((((...))))))... {-37.50 d=10.53} [ VIEW IN FORNA ]