| Accession Number: ENCR40010098 |
Category: tRNA |
| Cross-Ref: Nondisruptable_sequence_ID: CCNA_99960; Rfam: RF00005 |
Description: tRNA (GUG) (CCNA_R0056) |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:625. |
| Nucleotide sequence: GGCGGAUGCGUAGCUCAGCGGGAGAGCACCUCGUUCACACCGAGGGGGUCACAGGUUCAAUCCCUGUCGCAUCCACCAUUCUCCUCUUCUUUUGUGC |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -31.6 kcal/mol is given below. |
|
((.(((((((..((((.......)))).(((((.......))))).....(((((.......)))))))))))).))....................
(-31.60)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -32.52 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 22.4 %. |
| The ensemble diversity is 11.24 |
|
((.(((((((..((((.......)))){((((,{{.....,))})}}}}.(((((.......)))))))))))).))....................
[-32.52] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -29.70 kcal/mol is given below. |
|
((.(((((((..((((.......))))(((((............))))).(((((.......)))))))))))).))....................
{-29.70 d=7.75}
[ VIEW IN FORNA ]
|