| Accession Number: ENCR40010102 |
Category: non-coding element |
| Cross-Ref: Nondisruptable_sequence_ID: Gap_0073 |
Description: nondisruptable intergenic region |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:629. |
| Nucleotide sequence: GCUAACAUAGCAUUAACGUCAACAAUAACGCACCUGCACUCAAGUACGACCAUACCGCGAAACGAUGAAUUUCGAUGCAUACAAUACCGCCUAAAGC |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -8.00 kcal / mol is given below. |
|
((((...))))......(((.((......((....))......))..)))......(((...(((......))).)))...................
(-8.00)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -9.69 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 6.44 %. |
| The ensemble diversity is 17.67 |
|
((({...}))).....,((,........,{{....}}......}}..},.......(((...(((......))).)))...................
[-9.69] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -6.50 kcal/mol is given below. |
|
((((...)))).............................................(((...(((......))).)))...................
{ -6.50 d=11.29}
[ VIEW IN FORNA ]
|