| Accession Number: ENCR40010109 |
Category: non-coding element |
| Cross-Ref: Nondisruptable_sequence_ID: Gap_0067 |
Description: nondisruptable intergenic region |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:636. |
| Nucleotide sequence: UCGUGAUGCGUGUCGGGCCGGCUGUCUCGCUUUGGCACGGAAAGGCCAGUGAAAUAAGGGUUUCAGCGCGGUCGCCUCGUCGCCCGGCUCAAAGC |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -28.9 kcal/mol is given below. |
|
...(((.(((((.((((.((((((...(((((((((........))))).(((((....))))))))))))))).)))).)))...)))))....
(-28.90)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -31.6 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 1.26 %. |
| The ensemble diversity is 27.69 |
|
..,{...{{,.((((((({((({(,,.{((,,((((........))))}{(((((....)))))))))}))})),}.,}.,))))))).},..,,
[-31.60] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -19.30 kcal/mol is given below. |
|
...........(((((((.........(((..((((........))))..(((((....))))).))).............))))))).......
{-19.30 d=18.60}
[ VIEW IN FORNA ]
|