| Accession Number: ENCR40010128 |
Category: tRNA |
| Cross-Ref: Nondisruptable_sequence_ID: CCNA_99991; Rfam: RF00005 |
Description: tRNA (UCG) (CCNA_R0007) |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:655. |
| Nucleotide sequence: GCGGAGAGGGUGGGAUUCGAACCCACGUUACGCUUUCACGUAAACCGCAUUUCGAGUGCGGCGCAUUCGACCACUCUGCCACCUCUCCAG |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -33.2 kcal/mol is given below. |
|
..((((((((((((.......))))).(((((......)))))...(((..((((((((...))))))))......)))..)))))))..
(-33.20)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -34.54 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 11.3 %. |
| The ensemble diversity is 12.65 |
|
..((((((((((((.......))))).(((((......))))).{,(((,.,{{{||||,,.|||}}}}}......}))..)))))))..
[-34.54] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -31.80 kcal/mol is given below. |
|
..((((((((((((.......))))).(((((......))))).........(((((((...)))))))............)))))))..
{-31.80 d=10.40}
[ VIEW IN FORNA ]
|