Accession Number: ENCR40010148 |
Category: promoter; regulatory region |
Cross-Ref: Regulatory_region_ID: RR_00068 |
Description: TSS position: -; CCNA leading gene: CCNA_00068 ; CCNA lagging gene: CCNA_00068 ; annotation of leading gene: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
Condition: Rich medium |
locus_tag: - |
Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:675. |
Nucleotide sequence: CAAGGGAGCCAAGGC |
Results for minimum free energy prediction |
The optimal secondary structure in dot-bracket notation with a minimum free energy of -0.30 kcal / mol is given below. |
.......((....))
(-0.30)
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|
Results for thermodynamic ensemble prediction |
The free energy of the thermodynamic ensemble is -0.69 kcal/mol. |
The frequency of the MFE structure in the ensemble is 53.39 %. |
The ensemble diversity is 1.43 |
The centroid secondary structure in dot-bracket notation with a minimum free energy of -0.30 kcal/mol is given below. |
.......((....))
{ -0.30 d=1.17}
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|