| Accession Number: ENCR40010152 |
Category: promoter; regulatory region |
| Cross-Ref: Regulatory_region_ID: RR_00082 |
Description: TSS position: 19a ; CCNA leading gene: CCNA_00082 ; CCNA lagging gene: CCNA_00082 ; annotation of leading gene: class 1 lysyl-tRNA synthetase |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:679. |
| Nucleotide sequence: CCCUAGCCCUCCGCCCUCGCGCGGUUUAUACGCCCCGC |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -6.10 kcal / mol is given below. |
|
..................(((.(((......))).)))
(-6.10)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -6.88 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 28.3 %. |
| The ensemble diversity is 8.05 |
|
.....,,....,||....{{|.||{......}}}.}}}
[-6.88] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -6.10 kcal/mol is given below. |
|
..................(((.(((......))).)))
{ -6.10 d=5.80}
[ VIEW IN FORNA ]
|