| Accession Number: ENCR40010158 |
Category: promoter; regulatory region |
| Cross-Ref: Regulatory_region_ID: RR_00153 |
Description: TSS position: 128b ; CCNA leading gene: CCNA_00153 ; CCNA lagging gene: CCNA_00153 ; annotation of leading gene: GrpE protein |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:685. |
| Nucleotide sequence: AUAAGGACUUUACCCAA |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -0.30 kcal / mol is given below. |
|
....((.......))..
(-0.30)
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|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -0.80 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 44.21 %. |
| The ensemble diversity is 1.83 |
|
....((.......),..
[-0.80] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of 0.00 kcal/mol is given below. |
|
.................
{ 0.00 d=1.46}
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|