| Accession Number: ENCR40010174 |
Category: promoter; regulatory region |
| Cross-Ref: Regulatory_region_ID: RR_00306 |
Description: TSS position: -; CCNA leading gene: CCNA_00306 ; CCNA lagging gene: CCNA_00306 ; annotation of leading gene: hypothetical protein |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:701. |
| Nucleotide sequence: GAUCUGGACCACCCGGCGCCCGACCAGGACGGGGAGAUCACGGC |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -11.4 kcal/mol is given below. |
|
(((((...((..((((.......)).))..))..))))).....
(-11.40)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -11.92 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 43.03 %. |
| The ensemble diversity is 8.53 |
|
(((((...((.,((({...,...}}.))..)),.))))).....
[-11.92] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -7.20 kcal/mol is given below. |
|
(((((...((..(.((.......))..)..))..))))).....
{ -7.20 d=5.74}
[ VIEW IN FORNA ]
|