| Accession Number: ENCR40010182 |
Category: promoter; regulatory region |
| Cross-Ref: Regulatory_region_ID: RR_00342 |
Description: TSS position: -; CCNA leading gene: CCNA_00342 ; CCNA lagging gene: CCNA_00343 ; annotation of leading gene: 2-oxoglutarate dehydrogenase E1 component |
| Organism: Caulobacter crescentus |
RefSeq: NC_011916 |
| Condition: Rich medium |
locus_tag: - |
| Date: 2018/11/11 |
Reference: Christen B, et al (2011). The essential genome of a bacterium. Mol Syst Biol, 7:709. |
| Nucleotide sequence: UGCGGUAGCGCUCCCGUAAGCAGCGGAUCUGAAGGCGACAAAUCCA |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -8.60 kcal / mol is given below. |
|
(((((........)))))......((((.((.......)).)))).
(-8.60)
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|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -9.48 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 23.97 %. |
| The ensemble diversity is 13.10 |
|
,(((,...||}..||||.....},||{,.{{.......},.,}}}.
[-9.48] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of 0.00 kcal/mol is given below. |
|
..............................................
{ 0.00 d=9.61}
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|