| Accession Number: ENCR40100033 |
Category: - |
| Cross-Ref: - |
Description: tRNA-Met |
| Organism: Brevundimonas subvibrioides ATCC 15264 |
RefSeq: NC_014375 |
| Condition: Rich medium |
locus_tag: locus_tag:Bresu_R0047 |
| Date: 2018/11/11 |
Reference: Curtis, P.D. and Brun, Y.V. (2014) Identification of essential alphaproteobacterial genes reveals operational variability in conserved developmental and cell cycle systems, Mol. Microbiol., 93, 713-775. |
| Nucleotide sequence: GGGCGCGUAGCUCAAUGGUUAGAGCCGACCGCUCAUAACGGUCUGGUUGGGGGUUCGAGUCCCUCCGCGCCUACCG |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -31.4 kcal/mol is given below. |
|
((((((((((((....))))).(((((((((.......))))).))))(((((.......))))))))))))....
(-31.40)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -32.41 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 19.41 %. |
| The ensemble diversity is 20.07 |
|
((((((({{(((....,}}}},{(({(((((.......))))).)))}(((((.......))))))))))))....
[-32.41] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -30.50 kcal/mol is given below. |
|
(((((((((((......)))).(((((((((.......))))).))))(((((.......))))))))))))....
{-30.50 d=13.52}
[ VIEW IN FORNA ]
|