Information In Noncoding For ENCR40130011

Accession Number:  ENCR40130011	Category:   -
Cross-Ref:   -	Description:   tRNA-Thr
Organism:   Providencia stuartii strain BE2467	RefSeq:   NZ_CP017054
Condition:   LB medium	locus_tag:   locus_tag:BGK56_RS14490
Date:   2020/6/28	Reference:   Johnson, A. O., et al. (2020). Transposon Insertion Site Sequencing of Providencia stuartii: Essential Genes, Fitness Factors for Catheter-Associated Urinary Tract Infection, and the Impact of Polymicrobial Infection on Fitness Requirements. Msphere, 5(13).

Nucleotide sequence:   GCTGATATGGCTCAGTTGGTAGAGCACACCCTTGGTAAGGGTGAGGTCCCCAGTTCGAATCTGGGTATCAGCACCA

Molecular structure In Noncoding For ENCR40130011

Results for minimum free energy prediction

The optimal secondary structure in dot-bracket notation with a minimum free energy of -30.30 kcal/mol is given below.

(((((((..((((........)))).(((((((...))))))).....(((((.......)))))))))))).... (-30.30) [ VIEW IN FORNA ]

Results for thermodynamic ensemble prediction

The free energy of the thermodynamic ensemble is -30.77 kcal/mol.

The frequency of the MFE structure in the ensemble is 46.31 %.

The ensemble diversity is 1.59

(((((((..((((........)))).(((((((...))))))).....(((((.......)))))))))))).... [-30.77]

The centroid secondary structure in dot-bracket notation with a minimum free energy of -30.30 kcal/mol is given below.

(((((((..((((........)))).(((((((...))))))).....(((((.......)))))))))))).... {-30.30 d=0.95} [ VIEW IN FORNA ]