| Accession Number: ENCR40140030 |
Category: - |
| Cross-Ref: GeneID:2986927 |
Description: tRNA-Glu |
| Organism: Mycoplasma pneumoniae M129 |
RefSeq: NC_000912 |
| Condition: LB agar |
locus_tag: locus_tag:MPNt32 |
| Date: 2020/7/10 |
Reference: Lluch-Snar, M., et al. (2015). Defining a minimal cell: essentiality of small ORFs and ncRNAs in a genome-reduced bacterium. Molecular systems biology, 11(1), 809. |
| Nucleotide sequence: GGCGCGTTGGTGAAGAGACTTAACACACACGCCTTTCACGCGTGCATTCACGGGTTTGAATCCCGTACGCGTCACCA |
Results for minimum free energy prediction |
| The optimal secondary structure in dot-bracket notation with a minimum free energy of -24.70 kcal/mol is given below. |
|
((((((((((.((..((((((......(((((.......))))).......))))))...))))).)))))))....
(-24.70)
[ VIEW IN FORNA ]
|
Results for thermodynamic ensemble prediction |
| The free energy of the thermodynamic ensemble is -26.01 kcal/mol. |
| The frequency of the MFE structure in the ensemble is 12.02 %. |
| The ensemble diversity is 23.03 |
|
(((((((,{({,{,,..,|||..}.,.(((((.......))))).....{{{||,.,....))))})))))))....
[-26.01] |
| The centroid secondary structure in dot-bracket notation with a minimum free energy of -21.50 kcal/mol is given below. |
|
(((((((....................(((((.......)))))......((((.......)))).)))))))....
{-21.50 d=16.15}
[ VIEW IN FORNA ]
|