Accession Number |
|
Cross-Ref |
Description |
|
RefSeq |
|
locus_tag |
Nucleotide_sequence |
ENCR40010001 |
RNaseP_bact_a |
Nondisruptable_sequence_ID: CCNA_99919; Rfam:RF00010 |
RNase P RNA (CCNA_R0061); Bacterial RNase P class A |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
ACCAGAUGAUCUGUAAGCCGGGUUCUGUUCCGCCCCGCCCAUCCGAAGACAGGGAGACGGCGACGAUCAUUCCUCUAGGCCGGCCAUUGCUGGACGGCUCUCGCGACCUACCCGGAUCCUCUCAGCCAGUGACGGCCUAGUCGGCGCGAGGCCGACGCGGGAUCCCUAUUCGGUCUUGCUCCAGGCGGGGCUUGCCAUGCCGUCCCUGUCACCAGGUCCGCGGUGGGCUCUUACCCCACCCUUUCACCCUUCCCGCCCCGUAGGGAGGAGGUUUGCUUUCUGUGGCGCUAUCCCUGGGAUCGCUCCCGGUGGGCGUUACCCACCGCCUUGUCACCGUGGAGCCCGGACUUUCCUCGGCGUCCGAAGACGACGCGACCGCCCGAUCAUCUGGUC |
ENCR40010002 |
tRNA |
Nondisruptable_sequence_ID: CCNA_99979; Rfam: RF00005 |
tRNA (UAC) (CCNA_R0030) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
UGCAGAAGGACGUUUCCGGUCGUUGCGUUCGGAAUGAGAGGACACUAUAAGACGCGCUCCGAUUUGGGGCCCCGAGGGCUUCUCGGCCAGCCGGCGCUGCUCUUAGCAUCGUCCGUCACCGGUCCAAGAAGCUUUUGUUUCGCAUCGGCGUUUGACGGCUUGCCGUCGCGCGUCGAAGCGGAUAAAGGCCGCCGGCUUCGGAACUCCAUCGCGUGCUUGGGGGAAUGUCCCGAGUGGCAAAGGGGGGGGACUGUAAAUCCCCUGGCGUAAGCCUUCGUAGGUUCGAGUCCUACUUCCCCCACCAUGCGCGCGAUGAGUUCCGGAAGGCAGCGCCCUUUAAAAAGCAUGGGGG |
ENCR40010003 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0017 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
UUUGAAGGCUUGGCGCCAGGGGCGAUCGCUCACCGCGAGACGACAGCGCCCGUGGCCGGGUCGGCGGCGAAAAAUCGCGCCGUCUUGGCGCUCAGUUUCGACCGCAAAUACUGAUAUAUUUCGCGCUGUUGAAUGGAAUGUCGCGGUAAAAUUCGCGCCGAAUUCGGCAAAAAUACUUAUCGAAAAUUGGACCUGAAAAUAAAACAAUUGUGGAAAACCUAUUUCUAGGUCAUUAUUGUUUUAUUGAAUAUCGCACUGGCUCGGUCGCUCUCCACGCUUGCUCUUCGGAUCGAGCUUCGGGCCUACCAAGAACCUCUCCGACAAUUUGAUCGUAGGGCCUGUUUGAGGC |
ENCR40010004 |
alpha_tmRNA/beta_tmRNA |
Nondisruptable_sequence_ID: CCNA_99923; Rfam: RF01849/RF01850 |
tmRNA1 (CCNA_R0049); Alphaproteobacteria transfer-messenger RNA; Betaproteobacteria transfer-messenger RNA |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
UCCGGCUUCGGCCGAACUAUGGGGAUAAACGCGCACGUAAUAAGCGGACUGGACCCGGGUGCGAUUCCCGGCGGCUCCACCAAAUCUCUCCCGCGUUAUCACGGGACUGCAUGGGGCCGAUCAGCAUCGACAGACGUGUAAAGGUGUCUGCUUUCUCUCGGCUUGGCCCACCGUUUCGGGCCUUUAUCUAAAUGCGAACGAUAACUUCGCUGAAGAGUUCGCCGUCGCUGCGUAAUGCGGUGCAGGUGAAUUCGCCUCUUAAGUCCUAGGGGUUCAGAUCCCUAGGCGGGGCCCGGAGGGAGCCUGCCAACAGAAUCCC |
ENCR40010005 |
non-coding element |
Nondisruptable_sequence_ID: CCNA_99931 |
sRNA (CCNA_R0018) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
UCCCAAUCGGUCAUGGUCGUUUCCGCUUGUUGGUAUAUCGUCGGUCUAACUUGCCCCUGACGGAAGGUGCUUCGUUUGUUUUAUGGCAGAGCCGAAACUUGUUCGGUCAGGCGGCGAAAAAUCGUCGUCUGCUCCAGCGCGUUAACGCGCGGGCGGACGCGAUCGACGCGCAAGCAUGCGCCGAAGACGGCGAUAAGGAAAAGGGGAGGGAGGAAGGGACGCGUUCAGGGGGGGAGACGCUCGCGUCCCUUCCUCUCUAGCGCGACGCCCGGUUAGGGGGAGAGGG |
ENCR40010006 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0007 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
CUAAUGCCUAGGGGCUUUGACUCAAAAAUAUCAAGAAAAACAACGGCGAGGACGAGAAUAAAUAUCCUUAUACAGAUUAAAAUCUCGAUGGGCGCACCCCGAGCUUCUUUAUGCGGUUAGCGGGGAUGUAAUCCCAACCUCAAAAAAUGAACUCCAAUUCGAGUUCCAAGUCGAAUCUGUCAAAAAAGCUUCUCACUUUCGUGAUAGAAUAUUUUCCCUCAUAAUAUUCGGCCACGAAUAGUGAAUCUAAUUCGGCCCUGGAU |
ENCR40010007 |
tRNA/tmRNA |
Nondisruptable_sequence_ID: CCNA_99945; Rfam: RF00023 |
tRNA (GCC) (CCNA_R0089); tRNA;transfer-messenger RNA |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
UCCACAGGCGUUUUUGGGGGCGAAACAUUUUUCUCGAAAAAAGUUCGAGAAGAGGCUUGAUCCCAAAAAAAUCCCGGACUAGGUUCCGCGCCUCUUCGGGGGGCGACGCAAGUUCGAAACGCCGAAGAGACCAACGAUUUCCGAGAGUUACCGCAAGGUUUUCUUAGAAAGAAUUGGGGCUAUAGCUCAGCUGGUAGAGCGCUUGAAUGGCAUUCAAGAGGUCAGCGGUUCGACUCCGCUUAGCUCCACCAUCAAGG |
ENCR40010008 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0032 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
UCCGGGGUCGUAUUCGCGUCUUGCCUUUCGAAAAAGAGCGCUAUCGAACGGUGUUUCGGGAGCGGAAAAUAGCCUAGAAAAAACAGCCUCAUGUUUGUGAGCGCGUGCUGUUUUCGAUGCUUGCGUAUCCAUAUUGAGCAAUGAUUUUCCGAAAAGCGUUCCUCCUGUGGCGAUUUUGCGACAGGGGGGUCGGGAUAAUGAUUACUUUUUUGCAAUCAGAAU |
ENCR40010009 |
non-coding element |
Nondisruptable_sequence_ID: CCNA_99928 |
sRNA (CCNA_R0025) part |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
CUGCGGUCUGGUUUCGCCUUUUUUGGAGAGUGAUGCACGAAACUCCGAACUUUGUUUCUGUUCGUCACGAUCUGCAAAAGUGUAUUUUUAUGAACCGGAGGCGUUAAUCCGGGCUUGUAAUGUUUAUGGCAGGGGCGGGGAUCUUCUUUCUUGAUGUGGAGCUAGUGUCGGAGAACUCGAUAAAUUGUUAGAUAACUUCCACUC |
ENCR40010010 |
tRNA |
Nondisruptable_sequence_ID: CCNA_99955; Rfam: RF00005 |
tRNA (AGC) (CCNA_R0062) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
CGUUGACACGCGGGAAUUACCAAAAAAAGGGAGGAAUGGCGGAGACGGAGGGAUUCGAACCCUCGAUACCCUUUUGAGGUAUGCCGCUUUAGCAAAGCGGUGCCUUCAGCCUCUCGGCCACGUCUCCUCCUGAGAGGGAGCGGUUCGAUAGCGUGUUCGCUUCGCGAUGACAACGGCGGAUGUCGGAAUUUUCCGGUGUUAACG |
ENCR40010011 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0084 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
ACCUACGCGACGGCGCCCAUUUCGCGGGCGCCGCCAGUUGACGGCCACAAAGCCAUACUCCAAAUUCGAAAUCAGAAGUUCGGCCGAGAUCAUCUGCGGGGUGGAGGGGGCGUCGGUGGGCUGACCGACACUGCAGCUACCUGAAAUGCAGAGAAAAUGAUCCGCGCCGGGGAGGACGUUCGCGGGAAUUCAUGGGCUUUGGAU |
ENCR40010012 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0070 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
AGCCAGUCAAGCGACUUUUUCAAAGAAAAAGCUGAGCUCUUCUGGAAGAAAUACUUGGAAGCUCUUGCGAACAUCUUUUGCAUUUCAAGGAGCGCGGCUUCUAGCGAAACCGAAUUCCUGGGUCAACCGAACUUUUCAUUUUUGUUUUCCUUACCAGCCAGGCCGGAUCGGAGCGCAAAAAACACCGUUGGCGCGCCAUAGG |
ENCR40010013 |
tRNA |
Nondisruptable_sequence_ID: CCNA_99959; Rfam: RF00005 |
tRNA (CAC) (CCNA_R0057) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
CCGAAGACACCGAGGUCAGAAACGAAAAAAGCCCGGCUAGGCCGGGCUUUUCAAGGACUUGCGAUGGUACCAGCUCUCGGGCUCGAACCGAGGACCUCUAGAUCCACAAUCUAGCGCUCUAACCAACUGAGCUAAGCCGGCUCAUCGCGAGGCGUUGUCUUUAGUGGGAUCGCCCUUCGGGAUCAAGCACCGAUCCCGAU |
ENCR40010014 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0055 |
upstream of CCNA_02097 |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
CUUUGGCCUGCGGCGUCACGAAAUCUUCUCGCAACUGCGAAAUCCGCGUGAUUUCCGGUAGCGAAUUUGUGAUCGAAGUUUUACUGUAGAGACACCGGCGGCUCUCCACGCCGGUAUCAUCCGUCGCGAAGCGCCAAAAGACGCCUGCCGGUUCCCUAGCGAACCCAUCGGCAAGCGAAAAGGCCCCCCGACGGAAGACG |
ENCR40010015 |
tRNA |
Nondisruptable_sequence_ID: CCNA_99944; Rfam: RF00005 |
tRNA (CUG) (CCNA_R0090) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
GGUGGUGCCCAGGAGAGGACUCGAACCUCCACGACCUUUCGGUCACUGGCACCUGAAGCCAGCGCGUCUACCAAUUCCGCCACCUGGGCCCGCUGUCGCAACCGGUUAGGUCGCCGCGAGGCCGGGACGUUUAGGGAAAGCCUCAGGCCGCGUCAACAGCGAAAAAACGACAAAUCGUGAUUUCGUUGCGAACCGGGC |
ENCR40010016 |
suhB |
Nondisruptable_sequence_ID: CCNA_99934; Rfam: RF00519 |
sRNA (CCNA_R0014); suhB |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
GUGAGCUUCAAAAAAAUGACGUCGAACGUUUGUUUUCCGCUUGCCUAAUUUUGCGCCGCACUCUAAAAACAAUCCUGUGAGGCGGCGCUGCCGCUUCUGCCCUUCCUGGGCGUUUCCUCCCUAAUGAACUGGCCCGGCGGUUUCGCCGGGCUUUUUUUUGGAUUCGGCCCCGGGGCCCAGUCCCCAUAGCGG |
ENCR40010017 |
tRNA |
Nondisruptable_sequence_ID: CCNA_99986; Rfam: RF00005 |
tRNA (CAA) (CCNA_R0022) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
GUCGGGAGGCCUGAAAAAAGUUCUGAAAAGGUCGUUGCAUCCAUCCGAGUCGUGAGCUAUCUCCACCGCCUCGCCGGGCCCUGAGGGGUCUCGCCGUUCCUGCUGGGGAAUGGUGUAAUGGUAACACUGCGGUUUUUGGUACCGUCAUUCUAGGUUCGAGUCCUAGUUCCCCAGCCACUUC |
ENCR40010018 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0024 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
UUUAAGCGCGCCUGCAGGGUAAACAUAUAUUAUCGUUAAAAUCUAGGUUGUUCAUGUCUGUACUUGAUGAACGCUGCCUAUACUAUUCUUGUGAAAACUAUAGAAAGAGCGUUUAGGUACUGGUGCUGUGGGCAAAACGCCCACCGGUCGUCAAAACGACACCGGCAACCUCCAAAG |
ENCR40010019 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0041 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
UUGUAGGCUUUGAGACCGCUUCUGCGAUCGUUAGCCAGAUGAAUAGCAGCGAUGCGUUUUUAAUCUGUGAAUCGGAACGUCAAUUUCUGAAUGUUGGUUACCAAUAUGGUAACAAGAUUAGUAUUGCGAUCUAUAUUUGCUAAAUUUGGACGGCAUAUUUUUGUCGGUGUUGGCU |
ENCR40010020 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0052 |
upstream of nuoA (CCNA_02033) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
UUCAAACACCCGGCGCACAUUGAGAAACGUUCGCAACGAGAGACGUUUUGUCGGUUCUUCGAGAUGGCCGUUGACACGAGUCUUCACCCGACAUAUCAGACGCGCCUCGCCGAUUGGCGGGUCGCACUUUCGCCUCGGCGAAGGGGUAUGCGGAUGUAGCUCAGUUGGUUAGAGC |
ENCR40010021 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0093 |
origin of replication (gap1) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
GCCCGGACGUCCCUUAAGAUCUUUCUAACAUAUAUUAAUAAGAAAUUAAGAUUGAAGGAGGGAGCGGAAGGGCAACUGCAAAGUGGGGAAAACCCCUGUGAGGCGAGUGACUCGCACAGCCCGUCCCGGCUUUCCCCCAGGCCUUCCCACAUGGGGUUAACGCUCUGUUAAUC |
ENCR40010022 |
tRNA |
Nondisruptable_sequence_ID: CCNA_99990; Rfam: RF00005 |
tRNA (CGU) (CCNA_R0008) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
AAUUAUCCUUCAAACCGGGCUUGCGUCCCCGGAAUGGCUGGGCUAUCUCCCCCGCCUCGCCGCAAGGCAGUGCGCGCCCGUAGCUCAGCUGGAUAGAGCAUCAGACUACGAAUCUGAGGGUCGGACGUUCGAAUCGUUCCGGGCGCGCCAUUCUUCCCAAAGCUCGAAAC |
ENCR40010023 |
tRNA |
Nondisruptable_sequence_ID: CCNA_99958; Rfam: RF00005 |
tRNA (UUC) (CCNA_R0058) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
AUGGUGCCUGGGGCCGGAAUCGAACCAGCGACACGCGGAUUUUCAAUCCGCUGCUCUACCAACUGAGCUACCCAGGCAUCCGGGCUUUGGCGGCUGAAACCGCCUUGGCGACCUCGCCGUGCAGCGAGGAGCCGGGUCUAUAGGGGAGGCGCGAAAGGAUGUCCAGCGC |
ENCR40010024 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0042 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
ACAGAGCGCCUCCCUCGCGGCCGUGAAUUCGCGCCGCGAAAUCUUGGCGGCUGGAGUCGAUGAUUGGCUGGAUUGAGUUGAUAGAGUCUUUCAACCGAGGCCGGCCAAGCUGGUUCGUGAGGGUGAAUCUGGGAUUUAGAGUAAAGUGUCGCAGUUCAACUCACCAGCC |
ENCR40010025 |
tRNA |
Nondisruptable_sequence_ID: CCNA_99978 |
tRNA (GGA) (CCNA_R0031) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
CCCAGAGCCGAAAGACCGGGAGCCGAUCGCGACCCCGCUAGCACCAGAUGGGUGAUUGGGCGGGUAUAGCACAAUGGUAGUGCAGCAGCCUUCCAAGCUGAGGAUGCGGGUUCGAUUCCCGCUACCCGCUCCAGCUCCCUGAAGAGUUAUUCCCAACAACCCAGCCG |
ENCR40010026 |
tRNA |
Nondisruptable_sequence_ID: CCNA_99988 |
tRNA (GUC) (CCNA_R0015) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
GCUUGCGCAGUCCGCGAGCCGCCGCUAUACCCCCACACCUUCCCGGCCGGGACGUCUUCACGAAGACGCUUCGGAUCGCUUCGGCGGACGCGUAGCUCAGCGGGAGAGCACUACGUUGACAUCGUAGGGGUCACAGGUUCAAUCCCUGUCGCGUCCACCAUUCC |
ENCR40010027 |
tRNA |
Nondisruptable_sequence_ID: CCNA_99964; Rfam: RF00005 |
tRNA (CUC) (CCNA_R0052) |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
CUUGGUGCGGUCGAGAAGACUCGAACUUCCACGGGUUGCCCCACAGCGACCUCAACGCUGCGCGUCUACCAAUUCCGCCACGACCGCUCGUGGUGAGGGGCGGCUGGUAGCAAACUGAAUCGGCUUUGGGAAGCCGGAAGUUCGAGAAUGUCGAACUCAAGCC |
ENCR40010028 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0076 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
UCGUGAAACUACGCGGCCUGUCAAUAGGUCUGACGUCGAGGUCAGACCUAUUGACAGGCGGGGAUCAGACGCCAUUGCCGCUGAAAUCCCGUGGAAAAAUGGAACUCCAGAGCGCCGAACGGCCGGAAAACGCCUUUUGAGGCGGAAGGUUGUCGC |
ENCR40010029 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0023 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
GCCCGUGUCGAGAGCAUCUCUAUUCAUUGAUGUUCGUUUCACGAUUAACAAAAUAGCUUCAAUUCUUAAUUCUGUUUCAGUUUUUCCUCAACGAAGUGGAAAGCUCGUUGCGGGAUACUGCUUGUGGGCAAAACGCCCACCGACAGUCAAAAUG |
ENCR40010030 |
non-coding element |
Nondisruptable_sequence_ID: Gap_0044 |
nondisruptable intergenic region |
Caulobacter crescentus |
NC_011916 |
Rich medium |
- |
GUCCAAGUCGAGCGAUUGAGCCGGAAUUGCCGAGAACAUGGCCUUUUGCGUCAGCCGGACAACGUUGUCAUUGGAAUUAUUUGCCGAAUUCUCCUGUUAUCGCCCGGAACGCUAACCGCCAGUGGACGCGUUCUUGACCGAAGUGCUACUG |