| Protein Id: ABG02427.2 |
Length: 899 aa |
| Description: putative spike protein Nam Dinh virus. |
Molecule type: linear |
| Data category: VRL |
Date: 3-May-12 |
| Source: Nam Dinh virus |
| Class virus: alphamesonivirus |
Virus name: Nam Dinh virus |
| Host: mosquito |
Authors: Nga;P.T.; Parquet Mdel;C.; Lauber;C.; Parida;M.; Nabeshima;T.; Yu;F.; Thuy;N.T.; Inoue;S.; Ito;T.; Okamoto;K.; Ichinose;A.; Snijder;E.J.; Morita;K. and Gorbalenya;A.E. |
| Title: Discovery of the first insect nidovirus; a missing evolutionary link in the emergence of the largest RNA virus genomes |
Journal: PLoS Pathog. 7 (9); E1002215 (2011) |
| Taxonomy: Nam Dinh virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Mesnidovirineae; Mesoniviridae; Hexponivirinae; Alphamesonivirus; Namcalivirus. |
| Sequence: MINSKCPLLFQTTTTSMPNQAHRNRPGPPIILKPETQWHQNHNANASSSSKLHRSPLNNHPKDNQNLNATNLMLQHLPSLRSRKQLQQAPTTPKPAVNFTKSEKNSMLETTWDGGKMKRLDQQSSSSLNLKWHPELTKSTIAINLRILTISSILSVLAYLFKTQPLSAMQFTTTKNSLLKKKMSTFVNYLMPSMQSSCVHVKHLTLVPFLLLLLMLPNANCSTRIDLSTHHIVSYNKPLIVVDDFLKTTLKYNFGTDLYNSAINYKTSFEQLLNNFKTPYQPLVDAFRVLFSYLGIEPVAHPFKDYFNADSPCPLQTTTTTGDVTTIGEHFQEILDDGNLELEPLASYWLRHTEDIFVYTRSQLWAFICPSEFAQASIFLPNYTEAIYNVSTAFCKTVYYDTPTNAFNAEICNKVNFITPAKAQKRSKRWDSSYVCGWPLVSSAAKVLGGECTTNIDIGTLKSSLNAIQNFSYANTELIHDLQSQLSVVNARTNLHYNQLQQLVTAINDHQAKYVNDINNLINHIKNTTNTMENRINVNSIIMSYTNSLFRVYQNIVDYRFAYIETLSSIQQHYHFPSEHLHAFNVPLQAKLREHGFSIPIIDSNIPYSYGKVRYLNVTGINFYDLEFDIYIPVIKLIHEKDSKYYHSTLSALPIGINTTLVTYNTYQGNAICTDTYCLESPINGFCREGESYWYCGQHYIRTLHKITSLYTKPTKFTXSAMFIPPHTMYFVHNTTYSLNYGSSLQALAGSILMLTCNSTVQIPGYNFNSNDFVSCTDMNVNNVFIHPSLRVNDANFYIPPTRVDLLEKLYKRDIIPILNHIQKANDITIDTTADEELKQQYETLKSDFNAKYDALNIENRRIHALINSMHSIQSEPSYILYMVIAVIVFIVLKFLRII |
Nucleotide
| Nucleotide_Id: DQ458789.2 |
Length: 2700bp |
| Description: Nam Dinh virus isolate 02VN178; complete genome |
Source: Nam Dinh virus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 3-May-12 |
| Class virus: alphamesonivirus |
Virus name: Nam Dinh virus |
| CDS: DQ458789.2:15660..18359 |
Host: mosquito |
| Authors: Nga;P.T.; Parquet Mdel;C.; Lauber;C.; Parida;M.; Nabeshima;T.; Yu;F.; Thuy;N.T.; Inoue;S.; Ito;T.; Okamoto;K.; Ichinose;A.; Snijder;E.J.; Morita;K. and Gorbalenya;A.E. |
Journal: PLoS Pathog. 7 (9); E1002215 (2011) |
| Title: Discovery of the first insect nidovirus; a missing evolutionary link in the emergence of the largest RNA virus genomes |
db_xref: taxon:325676 |
| Taxonomy: Nam Dinh virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Mesnidovirineae; Mesoniviridae; Hexponivirinae; Alphamesonivirus; Namcalivirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(20192); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(360); ExactPosition(15638); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(360); ExactPosition(7851); strand=1); FeatureLocation(ExactPosition(7850); ExactPosition(15638); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(360); ExactPosition(7872); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(360); ExactPosition(7872); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(15659); ExactPosition(18359); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(15659); ExactPosition(18359); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(15673); ExactPosition(16312); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(15673); ExactPosition(16312); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(18401); ExactPosition(18878); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(18401); ExactPosition(18878); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(18753); ExactPosition(19104); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(18753); ExactPosition(19104); strand=1); type='CDS') |
| Sequence: ATGATTAACTCAAAATGCCCGCTACTATTTCAAACAACAACAACGTCAATGCCCAACCAGGCACATCGAAACAGACCCGGCCCACCAATAATTCTAAAACCGGAAACGCAATGGCACCAAAACCACAACGCCAACGCAAGCAGCAGCAGCAAGCTTCATCGCAGTCCCCTAAACAACCACCCAAAGGACAACCAAAACCTAAACGCAACCAACCTAATGCTGCAGCATCTGCCCAGCCTAAGGTCAAGAAAGCAATTGCAACAGGCCCCAACTACACCGAAACCAGCGGTAAACTTTACAAAATCGGAAAAGAATTCGATGCTAGAAACCACATGGGATGGAGGAAAAATGAAAAGACTGGATCAACAGTCCAGTTCCTCTTTAAACCTAAAATGGCATCCCGAATTGACCAAGTCTACTATCGCAATCAATTTGAGGATCCTGACCATTTCATCCATACTTTCGGTGTTGGCGTATTTGTTCAAGACTCAACCCTTGAGCGCAATGCAATTTACAACCACCAAAAACTCACTACTGAAGAAAAAGATGAGTACGTTCGTAAACTATCTGATGCCTTCAATGCAATCCTCCTGCGTACACGTCAAGCATTTGACTCTGGTTCCCTTCCTGCTCTTACTGTTGATGCTGCCTAATGCTAACTGCTCTACCCGTATAGATTTGAGCACACACCACATAGTTTCATATAACAAGCCACTTATAGTGGTAGATGATTTTCTGAAGACAACTTTAAAATATAATTTTGGCACTGATTTGTATAATAGTGCTATAAATTATAAAACCTCTTTCGAGCAACTTCTGAATAACTTTAAAACACCTTACCAACCACTTGTTGACGCCTTCCGCGTTTTATTTAGTTATTTAGGTATAGAACCCGTAGCCCATCCATTCAAGGATTACTTCAATGCTGATTCCCCTTGCCCCTTGCAAACTACAACAACCACTGGCGATGTAACCACTATAGGTGAACATTTCCAAGAAATCTTGGATGATGGTAATTTAGAATTGGAACCACTAGCTAGTTATTGGCTTAGACATACAGAAGATATTTTTGTATACACACGATCACAACTATGGGCCTTTATATGTCCTTCTGAATTTGCACAAGCTAGTATATTTTTACCCAATTATACTGAAGCCATTTATAATGTATCAACCGCTTTTTGTAAAACTGTCTATTATGACACCCCTACAAATGCCTTCAATGCTGAAATTTGTAATAAAGTTAATTTCATCACACCAGCCAAAGCACAAAAACGCAGCAAACGTTGGGATTCTTCCTACGTTTGTGGCTGGCCACTTGTATCTAGCGCCGCTAAAGTGCTGGGAGGTGAATGTACAACTAACATCGACATTGGTACTTTAAAATCAAGTCTAAATGCTATTCAAAATTTCTCTTATGCAAATACAGAATTAATCCACGACTTACAATCACAGCTTAGTGTTGTAAATGCTCGCACAAATCTTCACTATAATCAACTTCAACAACTCGTCACAGCTATAAATGATCATCAAGCTAAATATGTGAATGACATAAACAACTTAATTAACCATATTAAGAATACAACTAACACTATGGAAAATCGCATTAATGTTAACTCCATTATTATGTCTTATACTAATTCACTCTTTCGTGTATATCAAAATATAGTTGATTATCGCTTCGCGTATATAGAAACACTTAGTTCCATACAGCAACACTATCATTTTCCCTCTGAACATCTACATGCTTTTAATGTCCCTCTTCAGGCTAAACTTCGAGAGCATGGGTTTTCAATACCTATTATAGATTCAAATATCCCTTACTCTTATGGTAAAGTTAGATATCTAAATGTAACTGGCATAAATTTTTATGACCTTGAATTTGATATCTACATCCCTGTAATAAAACTCATTCATGAAAAAGATAGTAAATACTACCATTCAACGCTTTCAGCGCTCCCCATTGGAATTAATACTACACTAGTAACTTACAATACTTATCAGGGTAATGCTATATGCACAGATACGTATTGTCTTGAGTCACCTATTAACGGATTTTGCCGCGAAGGTGAGAGTTATTGGTATTGTGGCCAACATTATATTAGAACACTTCATAAAATAACCTCTTTGTATACCAAACCCACAAAATTCACTRAAAGTGCCATGTTTATACCACCACATACTATGTACTTTGTACATAATACCACTTATTCATTAAACTATGGATCCTCACTTCAAGCACTAGCTGGTTCTATACTGATGCTAACTTGCAACTCTACAGTCCAGATCCCTGGGTACAACTTCAACTCCAACGATTTTGTTTCGTGCACAGATATGAATGTTAATAATGTTTTTATACATCCCTCCCTACGTGTCAATGACGCAAACTTCTATATACCGCCCACTCGAGTAGATCTACTTGAAAAACTTTATAAACGCGATATAATCCCTATACTAAATCATATACAAAAAGCTAATGACATAACTATAGACACCACGGCTGACGAAGAATTAAAACAACAATATGAAACACTTAAAAGCGATTTCAATGCTAAATACGACGCATTGAATATAGAAAATAGACGAATACACGCACTAATTAATAGTATGCATTCCATACAATCGGAACCCTCATATATTCTATACATGGTTATCGCAGTAATCGTTTTTATAGTCCTCAAATTTCTTAGAATCATATAA |