| Protein Id: ABI97395.1 |
Length: 1220 aa |
| Description: putative spike protein White bream virus. |
Molecule type: linear |
| Data category: VRL |
Date: 13-Nov-06 |
| Source: White bream virus |
| Class virus: Bafinivirus |
Virus name: White bream virus |
| Host: Blicca bjoerkna L. |
Authors: Schutze;H.; Ulferts;R.; Schelle;B.; Bayer;S.; Granzow;H.; Hoffmann;B.; Mettenleiter;T.C. and Ziebuhr;J. |
| Title: Characterization of White bream virus reveals a novel genetic cluster of nidoviruses |
Journal: J Virol 80 (23); 11598-11609 (2006) |
| Taxonomy: White bream virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Tornidovirineae; Tobaniviridae; Piscanivirinae; Bafinivirus; Blicbavirus. |
| db_xref: """taxon:405554, CDD:293677""" |
| Sequence: MWLITILATISCVTAQLSQTNPDCPIPTCTILPPPKTTLDNTKFRVVYTKDQEALIYATNFTSPFNNAQYPLPTLGNHLNRSYTLNYDKVFLNIADSPDMLNLKTSWTVVNNSNLCPLSPSVYRSTSPLQTLTTAEQYCFMTTATLTSAFLYDYTAMKPVGYIRARAEETISFFSIMKTNMVNRPTSPSLSQAHTHTLAAMRTTATGIQAQTFKPQTGFFIVLDASRARAVTNPLDTAIQPKFSPSFIKEVTFDHIFQTTINETARSVTRETTTGYIMNAAKTGALYKASPAYYLFLISSDCRLQQALSVPYDFSLGRFCPASMSCCLNKGYEQYYVNTWLFHYYNLKRLNVLNLESSPVSDHFIQLHRTFNTEHSMHCDGSPYASDTTYNIALLRDTVQFLNGTKTTTPLANEIPQLTDSLGYLKYQPDMVDASDHQNYMAYVTYLMAIFYPTFTEAQKFEFHNLLQSVCYFDKGSISRNQAYHSICHIISFQTTASVPYPIELQIPFTTEPTSGYNAYLVKTPIGSVAIGNQNPFDGEGVCFLTTCIYHPTKKINQKLTIPPVRWQVVPEGIAVVTGIPPNCLGYETYTQGSSFFTIYNDSKPCQPQTMQIAQARSVITTVYSAAQKSDIFVQPYGKSSWVNGSYQFDQFVGGALNLRTLTFTMRKPTQLYVLDPIEGTYIIPDYQTKFPLLTSGTQTYYYDPDQTVTNTTEVSKVTIDFSIRTMITLDPLVFNCEEFICDKDPTCRTQFSSYCQTTQPILAALKDAFEKYNRSIADYTSTIRALTNTTQDLFASATPVRYRRGVEVPLGYGHDLEQPSWVYDLGGTAIVPWIGTAVAVGKLANRVASIEATLYQITQGVKQSIQSTNDKFDKITNILHTHLRPVTEGLVRTNEQLNAFSKQVRDQFTMINTVTTELSAYVDQLQQVFTVGAFYQNQILQVISQLNSLQVYVDTLTSSFTDCISDLNQKILSPACITTHQLLQINKPSDNLGLKNVLTHYINGSAATFYHLTSTKGVYKPLPKLFNNTHFLAPTTAYNPVTGTCFFCGSNACDKSVTVDCDYQPQPLQSTILAVYPTPTGLDLLTITSNKTFEIKHGSTVVTSVAIPPPPILSSTININVTFQQQLLQLQEQVDQLNLQTNYTTTEIQSIIDKYNVEIQNALNQIVDFGPGTPSLALWKVILILIAVVVVIVIIATTIFCSVRKNQSELPLQVLSRLR |
Nucleotide
| Nucleotide_Id: DQ898157.1 |
Length: 3663bp |
| Description: White bream virus strain DF24/00; complete genome |
Source: White bream virus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 13-Nov-06 |
| Class virus: Bafinivirus |
Virus name: White bream virus |
| CDS: DQ898157.1:21525..25187 |
Host: Blicca bjoerkna L. |
| Authors: Schutze;H.; Ulferts;R.; Schelle;B.; Bayer;S.; Granzow;H.; Hoffmann;B.; Mettenleiter;T.C. and Ziebuhr;J. |
Journal: J Virol 80 (23); 11598-11609 (2006) |
| Title: Characterization of White bream virus reveals a novel genetic cluster of nidoviruses |
db_xref: taxon:405554 |
| Taxonomy: White bream virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Tornidovirineae; Tobaniviridae; Piscanivirinae; Bafinivirus; Blicbavirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(26660); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(905); ExactPosition(21523); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(905); ExactPosition(14555); strand=1); FeatureLocation(ExactPosition(14554); ExactPosition(21523); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(905); ExactPosition(14573); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(905); ExactPosition(14573); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(14548); ExactPosition(14555); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(21524); ExactPosition(25187); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(21524); ExactPosition(25187); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25213); ExactPosition(25897); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25213); ExactPosition(25897); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25914); ExactPosition(26400); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25914); ExactPosition(26400); strand=1); type='CDS') |
| Sequence: ATGTGGCTAATCACCATTCTTGCCACAATCTCCTGCGTCACAGCGCAACTCTCACAAACCAACCCAGATTGTCCAATTCCAACATGCACAATCCTCCCACCACCAAAAACCACACTGGACAACACAAAATTTCGTGTTGTCTACACAAAGGACCAAGAAGCCCTTATTTATGCAACAAACTTCACCAGTCCATTTAACAATGCACAATACCCACTGCCCACATTAGGTAATCATCTAAATAGGTCGTACACACTCAACTATGACAAAGTCTTCCTTAACATCGCTGACTCACCAGATATGTTAAACTTGAAAACAAGCTGGACTGTTGTTAATAATTCCAACCTTTGTCCTTTGTCTCCATCTGTGTACAGGTCAACTTCACCATTACAAACGTTAACAACAGCCGAACAATACTGCTTCATGACAACTGCAACTCTAACATCAGCCTTTCTGTATGATTATACAGCCATGAAACCAGTCGGTTACATCAGAGCGCGTGCTGAAGAAACTATTAGCTTCTTTAGTATCATGAAAACCAATATGGTGAACAGACCTACTAGTCCATCCCTTTCACAAGCACACACACACACACTAGCAGCCATGCGAACAACAGCAACAGGCATACAAGCCCAAACATTTAAACCACAAACAGGATTCTTCATCGTTCTAGACGCTTCAAGAGCACGTGCAGTTACAAATCCTCTTGACACCGCCATCCAACCTAAATTCTCACCATCATTCATTAAGGAAGTCACATTCGACCACATCTTTCAAACTACAATCAATGAAACTGCACGCAGTGTAACCAGAGAAACAACAACTGGATACATCATGAATGCCGCTAAAACTGGTGCATTGTACAAAGCTTCACCTGCATACTACCTTTTTCTCATCTCATCAGACTGCCGCTTACAACAAGCCTTATCGGTGCCCTACGATTTTAGTTTGGGCCGCTTTTGCCCTGCTTCAATGTCTTGCTGTTTAAATAAAGGTTATGAACAGTACTATGTAAATACTTGGCTCTTCCACTACTACAACCTCAAACGCTTAAATGTACTAAACCTAGAATCATCACCTGTATCTGACCACTTTATACAACTACACCGCACATTCAACACAGAACATTCCATGCACTGCGACGGCTCACCATACGCATCAGACACAACATACAACATCGCCCTTCTACGTGACACAGTTCAATTTCTCAATGGCACCAAAACAACAACACCACTCGCAAATGAAATCCCACAACTCACAGACAGTCTTGGATACCTAAAATACCAACCAGACATGGTTGATGCATCTGACCATCAAAACTATATGGCCTATGTGACCTACCTAATGGCAATCTTCTACCCAACATTCACAGAAGCACAGAAATTTGAGTTCCACAATCTACTTCAATCTGTTTGCTATTTTGACAAAGGCTCAATTTCAAGAAATCAAGCCTACCATTCCATCTGCCATATCATCAGTTTCCAGACAACAGCTTCTGTACCATACCCCATTGAACTACAAATCCCATTTACAACAGAACCAACTAGCGGTTATAACGCATATCTAGTAAAAACACCAATTGGATCAGTTGCTATCGGAAATCAAAATCCTTTCGACGGCGAAGGTGTATGTTTTCTCACCACATGTATCTACCATCCAACCAAAAAGATCAACCAAAAGCTTACAATTCCACCTGTAAGATGGCAAGTTGTTCCAGAAGGTATTGCAGTTGTTACAGGTATTCCACCTAACTGTCTCGGTTATGAAACCTACACACAAGGATCCTCATTTTTTACAATTTACAATGACTCTAAACCATGTCAACCACAAACAATGCAAATTGCCCAAGCTCGCTCAGTCATTACAACAGTCTACAGCGCAGCACAGAAAAGTGATATTTTTGTACAACCATATGGTAAATCTTCATGGGTTAACGGTTCATACCAATTCGACCAATTTGTAGGTGGTGCTCTTAATCTCCGCACGCTTACATTCACAATGCGTAAGCCAACACAACTATATGTGCTTGACCCCATCGAAGGTACATATATCATTCCAGATTACCAAACCAAGTTTCCACTCCTCACATCAGGTACACAGACTTACTACTACGACCCAGACCAAACTGTCACAAACACAACAGAAGTCTCGAAAGTTACGATTGACTTTTCAATTCGAACCATGATCACATTAGACCCACTTGTCTTTAACTGTGAAGAATTCATCTGTGACAAAGATCCAACATGCCGTACACAATTCTCAAGCTACTGTCAGACAACACAACCTATTCTGGCAGCCCTCAAAGATGCATTTGAAAAGTACAACCGCTCCATTGCAGACTACACATCAACAATTCGCGCACTCACGAACACCACACAAGACCTCTTCGCATCAGCAACACCAGTAAGATACCGCCGTGGCGTTGAAGTTCCATTGGGTTACGGACATGATTTAGAACAACCCTCCTGGGTATATGATCTTGGTGGAACCGCCATAGTTCCTTGGATCGGTACAGCTGTAGCAGTTGGCAAACTTGCCAATCGTGTCGCATCTATTGAAGCCACACTATACCAGATCACTCAAGGCGTCAAGCAGTCAATTCAATCCACCAATGACAAGTTTGACAAAATCACAAACATTCTGCATACTCACTTACGTCCAGTAACAGAAGGTTTAGTCCGTACTAATGAGCAACTCAATGCATTCTCCAAACAAGTAAGAGATCAGTTCACAATGATTAACACCGTAACAACTGAACTCAGCGCATACGTAGACCAACTCCAACAAGTCTTTACCGTAGGTGCCTTTTACCAAAATCAGATCCTGCAAGTAATTTCACAACTCAACAGCTTGCAAGTATATGTAGATACCCTAACATCCAGTTTCACAGACTGCATTTCAGATTTAAACCAGAAAATCCTATCCCCAGCATGCATCACAACACATCAGCTTCTCCAAATCAACAAACCGTCTGATAACCTAGGACTCAAGAACGTACTCACCCATTACATCAACGGTTCAGCAGCAACATTCTATCATCTCACATCTACCAAAGGAGTTTACAAACCACTTCCCAAACTTTTTAACAACACCCATTTCCTTGCACCAACAACAGCTTACAACCCTGTGACAGGAACATGCTTCTTCTGCGGCAGCAATGCCTGCGATAAATCAGTAACAGTGGACTGTGATTACCAACCACAACCATTGCAGTCTACTATTCTCGCTGTTTATCCAACACCAACAGGTCTTGATTTACTTACAATAACATCAAACAAAACCTTCGAGATCAAGCATGGCTCAACAGTAGTCACTTCCGTCGCAATCCCGCCACCACCAATACTCTCCAGTACAATAAATATTAACGTCACATTCCAACAACAACTCCTCCAACTACAAGAACAAGTTGATCAGTTAAATCTACAGACAAATTACACCACAACAGAAATTCAATCCATTATTGACAAATACAATGTTGAAATTCAAAACGCTCTCAATCAAATTGTCGACTTCGGGCCAGGAACACCATCTCTTGCCTTGTGGAAAGTAATCTTAATCCTCATAGCAGTTGTCGTTGTAATTGTTATCATTGCAACAACAATCTTCTGTTCCGTTAGAAAGAACCAGTCTGAACTTCCACTTCAGGTACTGTCTCGCCTTCGCTAA |