| Protein Id: ABN10927.1 |
Length: 1269 aa |
| Description: Spike glycoprotein Bat coronavirus HKU9-3. |
Molecule type: linear |
| Data category: VRL |
Date: 7-Feb-07 |
| Source: Bat coronavirus HKU9-3 |
| Class virus: Coronaviridae |
Virus name: Bat coronavirus |
| Host: bat |
Authors: Woo;P.C.; Wang;M.; Lau;S.K.; Xu;H.; Poon;R.W.; Guo;R.; Wong;B.H.; Gao;K.; Tsoi;H.W.; Huang;Y.; Li;K.S.; Lam;C.S.; Chan;K.H.; Zheng;B.J. and Yuen;K.Y. |
| Title: Comparative analysis of twelve genomes of three novel group 2c and group 2d coronaviruses reveals unique group and subgroup features |
Journal: J Virol 81 (4); 1574-1585 (2007) |
| Taxonomy: Bat coronavirus HKU9-3 Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Nobecovirus. |
| db_xref: """taxon:424369, CDD:286493, CDD:279881""" |
| Sequence: MLVILLILPLVHARPSCLTVSPLQYLEHNISYVSLSVSKVTRLVPDPYVAYSGQTIRQSLYYADTSNVTVYPVTPYAAPDKTSIYNTSFVMVNDGLFVHTYMYLNQPSNMYCQDPFGVAFGTTFEQDHIAIVVIAPDNRGSWTAASKRNVTTVHILVCSNATLCAYPAFNRWGPASSIYASDAFVDHGNSCFVNNSFDIPINTSRINLAFRFLDGNLLLYHSRWLPGSGLNLATDYPLHFFMSVGVGANLPNAQFFQSVVRYNRGVDEARCHTFQNNLYIAPLSLREVLVSYSDSGLPLKVADCAADAGDELFCVTGSFEPAIGVYPLSRYRAQVSDYVHITQQSQACKLPYADIVSPPQPIVWRRYTVSSCSFDFESIVNNLPTYDLKCYGVSPARLAQMCYAGVTLDVMRINKTHYSNLIGNVPDLFTKYNYALPTNFYGCVHAYYINVTDGRYALATHYPATVITPGGRQPYNSYVATVLNTVNNWCTRANCFGLVVIGLKPASGRQLVCPKANDTEVIVQQCVKYNLYGYTGTGVLSPSNLTIPDGKLFVANNAGNIVAVNASGTVYGISSCVSVPVSVGYNPSFEQALLFNGLACSERAVAVNMPASTYWLSVSRNAAPPDGGVFDTPSGCVYNVRNLTTMVVNSCDMPIGNSLCLTNVTYANRATDSLPRLSLVTYDPTAANAVQLLTPVYWVSIPTNFTLAATSEYIQTSSPKINVDCAKYLCGDSDRCMNVLLQYGTFCDDVNKALAEVSATIDASVVSLMSELTSDVVRNENMQFDTTYNFTSLMGCLGSDCDSKMYRSALSDLLYNKVKVTDPGFMQSYQKCISQWGGEIRDLMCTQTFNGIAVLPPIVSPGMQALYTSLLVGAVASAGYTFGITSVGVVPFATQLQFRLNGIGVTTQVLVENQKLIANSFNNALTNIQKGFDATNEAISKMQLVINQHAQQLQTLVNQLGNSFGAISASINEIFSRLDGLEADAQVDRLINGRTVVLNTYVTQLLIKATEVRSQALLAKQKISECVKAQSLRNDFCGNGTHVLSIPQLAPNGILFLHYTYKPTAFAVVQTAAGLCYNGTGYAPVGGMFVLPNGTQAWHFTKMNFYNPVSITVENTQVLSTCGLNYSHVNYTVVNPSVPSDFDFEEEFNKWYKNHTSIFNNTFDPSAFNFSMVDVNKQLATLTDVVQQLNKSYIDLKQLNVYEQTIKWPWYIWLAMIAGLVGLALAVVMLLCMTNCCSCFKGMCSCKQCHYDEVDDVYPAVRVYNKRTA |
Nucleotide
| Nucleotide_Id: EF065515.1 |
Length: 3810bp |
| Description: Bat coronavirus HKU9-3; complete genome |
Source: Bat coronavirus HKU9-3 |
| Nucleotide_type: ss-RNA |
Molecule type: linear |
| Data category: VRL |
Date: 7-Feb-07 |
| Class virus: Coronaviridae |
Virus name: Bat coronavirus |
| CDS: EF065515.1:20959..24768 |
Host: bat |
| Authors: Woo;P.C.; Wang;M.; Lau;S.K.; Xu;H.; Poon;R.W.; Guo;R.; Wong;B.H.; Gao;K.; Tsoi;H.W.; Huang;Y.; Li;K.S.; Lam;C.S.; Chan;K.H.; Zheng;B.J. and Yuen;K.Y. |
Journal: J Virol 81 (4); 1574-1585 (2007) |
| Title: Comparative analysis of twelve genomes of three novel group 2c and group 2d coronaviruses reveals unique group and subgroup features |
db_xref: taxon:424369 |
| Taxonomy: Bat coronavirus HKU9-3 Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Nobecovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(29136); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(228); ExactPosition(20999); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(228); ExactPosition(12936); strand=1); FeatureLocation(ExactPosition(12935); ExactPosition(20999); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(20958); ExactPosition(24768); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20958); ExactPosition(24768); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24764); ExactPosition(25457); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24764); ExactPosition(25457); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25456); ExactPosition(25687); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25456); ExactPosition(25687); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25692); ExactPosition(26355); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25692); ExactPosition(26355); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26417); ExactPosition(27824); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26417); ExactPosition(27824); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27860); ExactPosition(28457); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(27860); ExactPosition(28457); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28458); ExactPosition(28905); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28458); ExactPosition(28905); strand=1); type='CDS') |
| Sequence: ATGTTGGTGATATTGCTAATATTGCCTTTAGTACATGCTAGACCCAGTTGTCTCACTGTGTCACCTTTACAGTATTTAGAACATAATATTTCTTATGTTTCCTTGTCTGTTAGTAAAGTGACACGTTTAGTGCCGGATCCTTATGTAGCGTATTCCGGGCAGACTATACGTCAAAGTTTGTATTATGCGGACACTTCTAATGTTACTGTGTATCCCGTAACGCCGTATGCGGCGCCTGACAAGACGAGCATATATAATACCTCCTTTGTGATGGTAAATGACGGTTTGTTTGTGCATACGTATATGTATTTGAATCAACCGTCTAATATGTACTGTCAAGACCCGTTTGGTGTGGCCTTTGGGACCACATTTGAACAGGATCATATAGCTATTGTGGTGATAGCACCTGACAATAGAGGTAGCTGGACGGCTGCGTCAAAGCGGAATGTAACTACAGTTCATATATTAGTCTGTAGTAACGCAACCCTTTGTGCGTACCCTGCATTTAATCGTTGGGGTCCTGCGAGTAGCATATACGCAAGTGATGCTTTTGTAGACCATGGTAATTCCTGTTTTGTAAACAACAGTTTTGATATACCTATTAATACGTCTCGTATTAATTTGGCTTTTAGGTTCTTGGATGGTAACCTATTGCTGTACCATTCTAGGTGGCTTCCAGGTTCTGGGCTTAATTTAGCCACAGATTACCCCCTACACTTCTTTATGAGTGTGGGTGTTGGCGCTAATTTGCCTAATGCACAGTTTTTCCAATCCGTAGTCCGCTATAACCGGGGTGTTGATGAAGCGCGATGTCATACTTTTCAGAATAATTTGTATATAGCACCTTTGAGTTTACGTGAAGTTTTAGTGTCTTACAGTGATAGTGGCTTGCCACTTAAGGTGGCTGATTGTGCGGCCGATGCAGGTGATGAGCTATTTTGTGTTACTGGCTCATTTGAACCTGCCATTGGTGTGTACCCTCTTAGTAGGTACCGTGCTCAGGTTAGTGATTATGTGCACATTACACAGCAATCACAGGCCTGCAAACTGCCTTACGCTGACATTGTATCACCACCTCAGCCTATTGTCTGGCGTCGATATACAGTGTCTAGTTGCTCATTTGACTTTGAGAGCATAGTTAATAATTTACCTACCTATGATCTCAAGTGCTATGGTGTATCACCCGCGCGGCTTGCACAAATGTGCTATGCGGGTGTTACTCTGGACGTTATGCGCATAAACAAGACGCATTATAGCAATTTAATTGGTAATGTGCCTGATTTATTTACAAAGTATAATTATGCCCTGCCCACCAATTTTTATGGTTGTGTTCACGCATATTATATTAATGTTACTGATGGCCGCTATGCTTTAGCGACTCATTACCCGGCCACTGTCATTACACCAGGAGGTAGACAGCCTTATAATAGCTATGTGGCTACTGTTTTGAATACAGTTAATAACTGGTGTACCAGAGCTAATTGTTTTGGTCTTGTAGTTATAGGATTGAAGCCTGCATCAGGTAGGCAGTTAGTCTGCCCTAAGGCTAATGATACTGAAGTTATAGTGCAGCAATGTGTTAAGTATAATTTGTACGGTTACACAGGTACCGGCGTTTTAAGCCCGTCTAATTTAACCATACCAGATGGTAAGTTGTTTGTGGCTAATAACGCAGGTAATATTGTTGCTGTTAATGCTTCTGGCACCGTATATGGCATTTCATCTTGCGTGTCAGTTCCTGTCTCAGTAGGATATAACCCCTCATTTGAGCAGGCGCTACTATTTAATGGTTTAGCGTGTTCAGAGAGAGCAGTTGCTGTTAATATGCCGGCGTCAACTTATTGGCTATCGGTGTCTAGAAACGCAGCCCCACCTGATGGTGGTGTGTTTGACACACCTTCTGGTTGTGTTTATAATGTACGCAATTTAACTACCATGGTAGTTAATTCGTGTGATATGCCTATTGGCAACAGCCTTTGTTTAACTAATGTAACTTATGCTAATAGGGCTACAGATAGTTTACCTAGGTTGAGTTTAGTCACTTATGATCCAACGGCTGCTAATGCTGTCCAGTTGCTCACACCAGTTTACTGGGTTAGTATACCCACTAATTTTACTCTGGCTGCTACTTCTGAGTATATACAAACTAGCTCACCAAAGATCAATGTAGATTGCGCGAAGTATTTATGTGGCGACTCTGATAGGTGTATGAATGTGTTGCTGCAGTATGGCACATTTTGTGATGACGTTAATAAGGCGCTGGCCGAGGTCAGTGCTACAATTGACGCATCCGTTGTGTCATTGATGTCAGAACTCACATCGGACGTTGTACGTAATGAAAACATGCAGTTTGACACTACATACAACTTTACCTCACTTATGGGTTGTTTGGGATCAGATTGTGATTCTAAAATGTACAGGTCCGCTTTATCGGACTTGTTGTATAATAAGGTCAAGGTCACGGACCCTGGCTTTATGCAGTCCTATCAGAAGTGCATTTCTCAGTGGGGTGGTGAAATTAGAGACCTTATGTGTACTCAAACCTTTAATGGTATTGCTGTTTTACCACCTATTGTTTCTCCAGGCATGCAAGCCTTGTACACATCATTACTTGTGGGTGCGGTAGCATCTGCAGGTTATACATTTGGCATTACTTCTGTCGGGGTTGTGCCTTTTGCGACGCAATTGCAATTTAGATTAAATGGCATAGGCGTCACTACGCAGGTGCTTGTAGAGAATCAGAAACTTATTGCTAATTCTTTTAACAATGCCCTTACTAATATACAGAAGGGTTTTGATGCCACTAATGAGGCGATTAGTAAGATGCAGCTTGTTATTAACCAGCATGCTCAGCAATTGCAGACTTTGGTGAACCAGTTAGGTAATTCATTTGGTGCTATATCTGCTTCTATTAATGAAATATTTAGTCGTTTAGATGGTTTAGAGGCTGATGCTCAAGTGGATAGGCTTATTAATGGACGCACTGTTGTGCTTAATACTTATGTAACTCAGTTGCTTATTAAAGCTACAGAAGTGCGTAGTCAGGCCCTGTTAGCTAAGCAGAAAATTAGTGAGTGCGTTAAAGCACAATCTCTTCGTAATGATTTCTGTGGCAATGGCACACATGTTTTGTCTATACCACAGTTAGCTCCTAATGGTATTTTGTTTTTGCATTATACCTATAAACCGACGGCTTTTGCTGTTGTGCAAACTGCTGCTGGTCTGTGTTATAATGGCACAGGGTATGCACCTGTAGGTGGCATGTTTGTGTTACCTAATGGTACGCAGGCCTGGCACTTTACTAAAATGAATTTTTATAATCCTGTTAGTATTACAGTTGAGAACACGCAGGTTTTATCTACATGTGGCTTGAATTATTCACATGTTAACTACACTGTGGTGAACCCGTCGGTACCTAGTGATTTTGATTTTGAGGAAGAGTTTAATAAGTGGTATAAAAACCATACCTCTATATTTAATAATACATTCGACCCTAGTGCTTTTAATTTTTCTATGGTCGATGTAAATAAGCAACTGGCTACTCTTACAGATGTTGTTCAGCAGCTAAACAAGTCGTATATTGATTTGAAGCAATTAAATGTTTATGAACAGACCATTAAATGGCCGTGGTATATATGGCTCGCTATGATAGCGGGCCTTGTTGGCTTAGCCCTTGCAGTGGTCATGCTTTTATGTATGACTAACTGTTGTTCATGCTTCAAAGGCATGTGTTCATGCAAGCAGTGCCATTATGATGAGGTAGATGATGTATATCCTGCTGTTCGTGTATATAATAAACGAACAGCATGA |