| Protein Id: AAY88866.1 |
Length: 1242 aa |
| Description: spike glycoprotein Bat SARS coronavirus HKU3-1. |
Molecule type: linear |
| Data category: VRL |
Date: 25-Oct-05 |
| Source: Bat SARS coronavirus HKU3-1 |
| Class virus: Coronaviridae |
Virus name: Bat SARS coronavirus |
| Host: -- |
Authors: Lau;S.K.; Woo;P.C.; Li;K.S.; Huang;Y.; Tsoi;H.W.; Wong;B.H.; Wong;S.S.; Leung;S.Y.; Chan;K.H. and Yuen;K.Y. |
| Title: Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats |
Journal: Proc Natl Acad Sci U S A 102 (39); 14040-14045 (2005) |
| Taxonomy: Bat SARS coronavirus HKU3-1 Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus. |
| db_xref: """taxon:333387, CDD:293060, CDD:286493, CDD:279881""" |
| Sequence: MKILIFAFLANLAKAQEGCGIISRKPQPKMAQVSSSRRGVYYNDDIFRSDVLHLTQDYFLPFDSNLTQYFSLNVDSDRYTYFDNPILDFGDGVYFAATEKSNVIRGWIFGSSFDNTTQSAVIVNNSTHIIIRVCNFNLCKEPMYTVSRGTQQNAWVYQSAFNCTYDRVEKSFQLDTTPKTGNFKDLREYVFKNRDGFLSVYQTYTAVNLPRGLPTGFSVLKPILKLPFGINITSYRVVMAMFSQTTSNFLPESAAYYVGNLKYSTFMLRFNENGTITDAVDCSQNPLAELKCTIKNFNVDKGIYQTSNFRVSPTQEVIRFPNITNRCPFDKVFNATRFPNVYAWERTKISDCVADYTVLYNSTSFSTFKCYGVSPSKLIDLCFTSVYADTFLIRSSEVRQVAPGETGVIADYNYKLPDDFTGCVIAWNTAKHDTGNYYYRSHRKTKLKPFERDLSSDDGNGVYTLSTYDFNPNVPVAYQATRVVVLSFELLNAPATVCGPKLSTELVKNQCVNFNFNGLKGTGVLTSSSKRFQSFQQFGRDTSDFTDSVRDPQTLEILDISPCSFGGVSVITPGTNASSEVAVLYQDVNCTDVPTAIRADQLTPAWRVYSTGVNVFQTQAGCLIGAEHVNASYECDIPIGAGICASYHTASVLRSTGQKSIVAYTMSLGAENSIAYANNSIAIPTNFSISVTTEVMPVSMAKTAVDCTMYICGDSLECSNLLLQYGSFCTQLNRALTGIAIEQDKNTQEVFAQVKQMYKTPAIKDFGGFNFSQILPDPSKPTKRSFIEDLLFNKVTLADAGFMKQYGDCLGDVSARDLICAQKFNGLTVLPPLLTDEMVAAYTAALVSGTATAGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQESLSSTASALGKLQDVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDKVEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPSQEKNFTTAPAICHEGKAYFPREGVFVSNGTSWFITQRNFYSPQLITTDNTFVSGNCDVVIGIINNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGLIAIVMVTILLCCMTSCCSCLKGACSCGSCCKFDEDDSEPVLKGVKLHYT |
Nucleotide
| Nucleotide_Id: DQ022305.2 |
Length: 3729bp |
| Description: Bat SARS coronavirus HKU3-1; complete genome |
Source: Bat SARS coronavirus HKU3-1 |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 25-Oct-05 |
| Class virus: Coronaviridae |
Virus name: Bat SARS coronavirus |
| CDS: DQ022305.2:21471..25199 |
Host: -- |
| Authors: Lau;S.K.; Woo;P.C.; Li;K.S.; Huang;Y.; Tsoi;H.W.; Wong;B.H.; Wong;S.S.; Leung;S.Y.; Chan;K.H. and Yuen;K.Y. |
Journal: Proc Natl Acad Sci U S A 102 (39); 14040-14045 (2005) |
| Title: Severe acute respiratory syndrome coronavirus-like virus in Chinese horseshoe bats |
db_xref: taxon:333387 |
| Taxonomy: Bat SARS coronavirus HKU3-1 Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(29728); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(261); ExactPosition(21464); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(261); ExactPosition(13377); strand=1); FeatureLocation(ExactPosition(13376); ExactPosition(21464); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(21470); ExactPosition(25199); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(21470); ExactPosition(25199); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25208); ExactPosition(26033); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26057); ExactPosition(26288); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26057); ExactPosition(26288); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26338); ExactPosition(27004); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26338); ExactPosition(27004); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27014); ExactPosition(27206); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27213); ExactPosition(27582); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27578); ExactPosition(27713); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27719); ExactPosition(28085); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28099); ExactPosition(29365); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28099); ExactPosition(29365); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28109); ExactPosition(28403); strand=1); type='CDS') |
| Sequence: ATGAAAATTTTAATTTTTGCTTTCTTAGCTAATTTAGCTAAAGCACAGGAAGGATGCGGTATCATCAGTAGAAAACCGCAACCTAAAATGGCACAAGTCTCATCTTCTCGTCGGGGCGTTTATTATAATGATGACATTTTCCGTTCTGATGTGTTACACCTCACACAGGATTACTTCCTGCCATTTGACTCAAATTTAACTCAGTACTTTTCGCTTAATGTGGATTCAGATAGGTATACCTATTTTGACAACCCCATACTAGACTTTGGTGATGGCGTTTATTTCGCTGCCACTGAAAAGTCTAACGTAATAAGAGGCTGGATTTTTGGTTCATCTTTTGATAACACCACCCAGTCAGCTGTTATAGTTAATAATTCAACACACATTATTATACGTGTGTGTAATTTTAACTTATGTAAAGAACCCATGTATACTGTTAGTAGAGGTACACAGCAAAATGCCTGGGTTTATCAGAGTGCATTTAATTGTACATATGACCGAGTGGAAAAGAGTTTTCAACTTGACACTACTCCTAAAACTGGAAATTTTAAAGACCTACGTGAGTATGTCTTTAAAAATAGGGATGGCTTTCTGTCTGTCTACCAAACTTATACTGCTGTTAATTTACCCAGAGGACTACCCACGGGTTTCTCAGTCTTGAAACCAATTTTAAAATTGCCCTTTGGAATTAATATCACTTCTTATAGAGTAGTTATGGCAATGTTTAGCCAAACTACTTCTAATTTTTTACCAGAAAGTGCTGCTTATTATGTTGGTAATCTTAAATATTCTACCTTCATGCTCCGATTTAATGAAAATGGGACGATCACGGATGCTGTAGATTGTTCCCAAAATCCTCTTGCTGAATTAAAATGCACCATTAAAAATTTCAATGTTGACAAAGGAATCTACCAAACATCCAACTTCAGAGTTTCACCCACTCAAGAGGTTATTAGATTTCCTAACATTACAAATCGCTGTCCTTTTGACAAGGTTTTTAATGCTACTCGCTTTCCTAATGTTTATGCATGGGAGAGAACAAAAATCTCTGATTGTGTTGCTGACTACACTGTTCTCTACAACTCAACCTCTTTCTCGACTTTTAAATGTTATGGAGTGTCTCCATCTAAGTTGATTGACCTATGCTTTACAAGTGTGTATGCTGATACATTCTTGATAAGATCTTCTGAAGTAAGACAAGTTGCACCAGGTGAAACTGGTGTTATTGCTGACTACAATTACAAGTTGCCTGATGATTTCACTGGCTGTGTAATTGCTTGGAATACTGCTAAACATGATACTGGCAATTATTACTACAGATCTCATCGCAAGACTAAGTTAAAGCCTTTTGAGAGAGACCTGTCTTCTGACGATGGTAATGGTGTGTATACACTCTCAACATATGACTTTAACCCTAACGTTCCAGTAGCATATCAGGCTACTAGGGTTGTTGTACTCTCTTTTGAACTTCTTAATGCACCTGCTACAGTTTGTGGACCTAAATTATCCACAGAACTAGTTAAGAACCAGTGTGTTAATTTCAATTTCAATGGACTTAAAGGTACTGGTGTTTTGACTTCTTCTTCAAAAAGATTCCAGTCATTTCAACAATTTGGTCGTGACACATCTGACTTTACGGATTCAGTACGTGACCCACAGACTTTAGAAATACTTGACATTTCACCTTGTTCCTTTGGTGGTGTTAGTGTTATCACACCTGGAACGAACGCCTCATCAGAGGTAGCTGTTCTCTATCAAGATGTAAATTGCACTGATGTCCCTACAGCAATACGTGCAGATCAATTAACACCTGCTTGGCGCGTTTATTCCACTGGAGTAAATGTGTTTCAAACACAAGCTGGCTGTCTTATAGGAGCTGAGCATGTCAACGCCTCTTATGAGTGTGACATTCCTATTGGTGCAGGCATTTGTGCTAGTTACCATACAGCTTCTGTTCTACGTAGTACCGGCCAGAAATCAATTGTTGCCTATACTATGTCACTGGGTGCTGAAAATTCCATTGCATACGCTAATAATTCAATTGCCATACCTACAAATTTTTCAATCAGTGTCACTACAGAAGTGATGCCTGTTTCAATGGCTAAAACAGCCGTGGATTGTACTATGTACATCTGCGGTGATTCTTTAGAGTGCAGCAACTTACTATTGCAGTATGGAAGCTTTTGCACACAACTCAATCGTGCCCTCACTGGCATTGCTATAGAACAGGACAAAAACACTCAGGAGGTCTTTGCCCAGGTTAAACAAATGTACAAGACACCTGCCATAAAGGACTTTGGCGGTTTCAATTTTTCACAAATATTGCCTGACCCTTCAAAGCCAACGAAGAGATCATTTATTGAAGACTTGCTCTTCAATAAAGTGACTCTCGCTGATGCTGGCTTTATGAAACAATATGGTGACTGCCTAGGTGATGTTAGTGCTAGAGACCTTATCTGTGCCCAGAAGTTCAATGGACTTACTGTGCTACCGCCACTGCTCACAGATGAGATGGTTGCTGCATACACAGCTGCGCTAGTTAGTGGTACTGCTACGGCGGGCTGGACGTTTGGTGCAGGTGCAGCTCTTCAAATACCATTTGCTATGCAAATGGCTTATAGGTTTAATGGCATTGGAGTTACTCAAAATGTTCTCTATGAGAACCAAAAGCTGATAGCCAATCAGTTTAATAGTGCTATAGGCAAAATTCAAGAATCATTATCATCTACTGCAAGTGCACTAGGAAAACTGCAGGATGTGGTTAACCAAAATGCACAAGCTCTTAACACGCTTGTTAAACAACTCAGCTCTAATTTTGGAGCTATCTCAAGTGTGTTAAATGATATTCTCTCTCGCCTTGATAAAGTTGAGGCAGAAGTTCAAATTGACAGGTTGATTACAGGCAGATTGCAAAGCCTTCAAACCTACGTAACACAACAACTTATCAGAGCTGCTGAAATCAGAGCTTCTGCTAATCTTGCTGCTACTAAAATGTCTGAGTGCGTTCTTGGACAATCAAAAAGAGTTGATTTCTGTGGAAAAGGCTACCACCTTATGTCCTTCCCTCAATCAGCACCTCACGGTGTCGTTTTTCTACATGTCACATATGTGCCATCACAAGAGAAAAACTTCACAACAGCTCCAGCTATTTGTCACGAAGGCAAAGCTTATTTCCCTCGTGAAGGTGTCTTTGTGTCTAATGGCACTTCTTGGTTTATTACGCAGAGGAATTTTTACTCTCCACAATTAATTACAACAGATAATACTTTTGTTTCTGGTAATTGTGATGTCGTGATCGGCATCATTAATAATACTGTTTATGATCCTCTGCAGCCTGAACTTGACTCGTTTAAGGAAGAGCTGGACAAGTACTTCAAAAATCATACATCACCAGATGTTGATCTTGGCGACATTTCAGGCATTAATGCTTCAGTCGTCAACATTCAAAAGGAGATTGACCGACTCAATGAGGTTGCCAAAAACCTAAATGAATCACTCATTGACCTCCAAGAACTTGGGAAATATGAGCAATACATCAAGTGGCCTTGGTATGTTTGGCTCGGCTTTATTGCTGGACTAATTGCCATCGTCATGGTTACAATCTTGCTTTGTTGCATGACCAGCTGTTGCAGTTGTCTCAAGGGTGCATGCTCTTGTGGTTCGTGCTGCAAATTTGATGAGGACGACTCTGAGCCAGTGCTCAAAGGAGTCAAATTACATTACACATAA |