| Protein Id: AAA61557.2 |
Length: 768 aa |
| Description: spike protein S1 subunit, partial Bovine coronavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 28-Jul-16 |
| Source: Bovine coronavirus |
| Class virus: Coronaviridae |
Virus name: Bovine coronavirus |
| Host: -- |
Authors: Rekik;M.R. and Dea;S. |
| Title: Comparative sequence analysis of a polymorphic region of the spike glycoprotein S1 subunit of enteric bovine coronavirus isolates |
Journal: Arch Virol 135 (3-4); 319-331 (1994) |
| Taxonomy: Bovine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus. |
| db_xref: """taxon:11128, CDD:293060, CDD:286493""" |
| Sequence: MFLILLISLPMAFAVIGDLKCTTVSINDIDTGVPSISTDTVDVTNGLGTYYVLDRVYLNTTLLLNGYYPTSGSTYRNMALKGTLLLSRLWFKPPFLSDFVNGIFAKVKNTKVIKKGVMYSEFPAITIGSTFVNTSYSVVVQPHTTNLDNKLQGLLEISVCQYTMCEYPHTICNPNLGNRRVKLWHWDTGVVSCLYKRNFTYDVNADYLYFHFYQKGGTFYAYFTDTGVVTKFLFNVYLGTVLSHYYVMPLTCNSAMTLEYWVTPLTSKQYLLPFNQNGVIFNAVDCKSDFMSEIKCKTLSIAPSTGVYELNGYTVQPIANVYRRIPNLPNCNIEAWLNDKSVPSPLNWERKTFSNCNFNMSSLMSFIQADSFTCNNIDAAKIYGMCFSSITIDKFAIPNGRKVDLQLGNLGYLQSFNYRIDTTATSCQLYYNLPAANVSVSRFNPSTWNRRFGFTEQSVFKPQPAGVFTDHDVVYAQHCFKAPTNFCPCKLDGSLCVGSGSGIDAGYKNSGIGTCPAGTNYLTCHNAAQCNCLCTPDPITSKATGSYKCPQTKYLVGIGEHCSGLAIKSDHCGGNPCTCQPQAFLGWSVDSCLQGDRCNIFANFILHDVNSGTTCSTDLQKSNTDIILGVCVNYDLYGITGQGIFVEVNATYYNSWQNLLYDSNGNLYGFRDYLTNRTFMIRSCYSGRVSAAFHANSSEPALLFRNIKCNYVFNNTLSRQLQPINYFDSYLGCVVNADNSTSSVVQTCDLTVGSGYCVVYSTKRRSRR |
Nucleotide
| Nucleotide_Id: AH010363.2 |
Length: 2304bp |
| Description: Bovine coronavirus hemagglutinin (HE) gene; complete cds; spike protein S1 subunit (S1) gene; partial cds; and 4.9 kDa putative non-structural protein; 4.8 kDa putative non-structural protein; 12.7 kDa putative non-structural protein; and E small membrane protein genes; complete cds |
Source: Bovine coronavirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 28-Jul-16 |
| Class virus: Coronaviridae |
Virus name: Bovine coronavirus |
| CDS: AH010363.2:1305..>3608 |
Host: -- |
| Authors: Rekik;M.R. and Dea;S. |
Journal: Arch Virol 135 (3-4); 319-331 (1994) |
| Title: Comparative sequence analysis of a polymorphic region of the spike glycoprotein S1 subunit of enteric bovine coronavirus isolates |
db_xref: taxon:11128; taxon:11128; taxon:11128 |
| Taxonomy: Bovine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(4663); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(3608); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(3708); ExactPosition(4663); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(15); ExactPosition(1290); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(15); ExactPosition(1290); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(1304); AfterPosition(3608); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(1304); AfterPosition(3608); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3608); ExactPosition(3708); strand=1); type='gap'); SeqFeature(FeatureLocation(ExactPosition(3708); ExactPosition(3840); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3875); ExactPosition(4013); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4092); ExactPosition(4422); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4408); ExactPosition(4663); strand=1); type='CDS') |
| Sequence: ATGTTTTTGATACTTTTAATTTCCTTACCAATGGCTTTTGCTGTTATAGGAGATTTAAAGTGTACTACGGTTTCCATTAATGATATTGACACCGGTGTTCCTTCTATTAGCACTGATACTGTCGATGTTACTAATGGTTTAGGTACTTATTATGTTTTAGATCGTGTGTATTTAAATACTACGTTGTTGCTTAATGGTTACTACCCTACTTCAGGTTCTACATATCGTAATATGGCACTGAAGGGAACTTTACTATTGAGCAGACTATGGTTTAAACCACCTTTTCTTTCTGATTTTGTTAATGGTATTTTTGCTAAGGTCAAAAATACCAAGGTTATTAAAAAGGGTGTAATGTATAGTGAGTTTCCTGCTATAACTATAGGTAGTACTTTTGTAAATACATCCTATAGTGTGGTAGTACAACCACATACTACCAATTTGGATAATAAATTACAAGGTCTCTTAGAGATCTCTGTTTGCCAGTATACTATGTGCGAGTACCCACATACGATTTGTAATCCTAATCTGGGTAATCGACGCGTAAAACTATGGCATTGGGATACAGGTGTTGTTTCCTGTTTATATAAGCGTAATTTCACATATGATGTGAATGCTGATTACTTGTATTTCCATTTTTATCAAAAAGGTGGTACTTTTTATGCATATTTTACAGACACTGGTGTTGTTACTAAGTTTCTGTTTAATGTTTATTTAGGCACGGTGCTTTCACATTATTATGTCATGCCTTTGACTTGTAATAGTGCTATGACTTTAGAATATTGGGTTACACCTCTCACTTCTAAACAATATCTACTACCTTTCAATCAAAATGGTGTTATTTTTAATGCTGTTGATTGTAAAAGTGATTTTATGAGTGAGATTAAGTGTAAAACACTATCTATAGCACCATCTACTGGTGTTTATGAATTAAACGGTTACACTGTTCAGCCAATTGCAAATGTTTACCGACGTATACCTAATCTTCCCAATTGTAATATAGAGGCTTGGCTTAATGATAAGTCGGTGCCCTCTCCATTAAATTGGGAACGTAAGACCTTTTCAAATTGTAATTTTAATATGAGCAGCCTGATGTCTTTTATTCAGGCAGACTCATTTACTTGTAATAATATTGATGCTGCTAAGATATATGGTATGTGTTTTTCCAGCATAACTATAGATAAGTTTGCTATACCCAATGGTAGGAAGGTTGACCTACAATTGGGTAATTTGGGCTATTTGCAGTCTTTTAACTATAGAATTGATACTACTGCTACAAGTTGTCAGTTGTATTATAATTTACCTGCTGCTAATGTTTCTGTTAGCAGGTTTAATCCTTCTACTTGGAATAGGAGATTTGGTTTTACAGAACAATCTGTTTTTAAGCCTCAACCTGCAGGTGTTTTTACTGATCATGATGTTGTTTATGCACAACATTGTTTTAAAGCTCCCACAAATTTCTGTCCGTGTAAATTGGATGGGTCTTTGTGTGTAGGTAGTGGTTCTGGTATAGATGCTGGTTATAAAAATAGTGGTATAGGCACTTGTCCTGCAGGTACTAATTATTTAACTTGCCATAATGCTGCTCAATGTAATTGTTTGTGCACTCCAGACCCCATTACATCTAAAGCTACAGGGTCCTACAAGTGCCCCCAAACTAAATATTTAGTTGGCATAGGTGAGCACTGTTCGGGTCTTGCTATTAAAAGTGATCATTGTGGAGGTAATCCTTGTACTTGCCAACCACAAGCATTTTTGGGCTGGTCTGTTGACTCTTGCTTACAAGGGGATAGGTGTAATATTTTTGCTAATTTTATTTTGCATGATGTTAATAGTGGTACTACTTGTTCTACTGATTTACAAAAATCAAACACAGACATAATTCTTGGTGTTTGTGTTAATTATGATCTTTATGGTATTACGGGCCAAGGTATTTTTGTTGAGGTTAATGCGACTTATTATAATAGTTGGCAGAACCTTTTATATGATTCTAATGGTAATCTCTATGGTTTTAGAGACTACTTAACAAATAGAACTTTTATGATTCGTAGTTGCTATAGTGGTCGTGTTTCAGCGGCCTTTCATGCTAATTCCTCCGAACCAGCATTGCTATTTCGGAATATCAAATGCAATTACGTTTTTAATAATACTCTTTCACGACAGCTGCAACCTATTAACTATTTTGATAGCTATCTTGGTTGTGTTGTCAATGCTGATAATAGTACTTCTAGTGTTGTTCAAACATGTGATCTCACAGTAGGTAGTGGTTACTGTGTGGTTTACTCTACAAAAAGACGAAGTCGTAGA |