| Protein Id: ADU17725.1 |
Length: 1457 aa |
| Description: spike protein Canine coronavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 21-Jul-11 |
| Source: Canine coronavirus |
| Class virus: Coronaviridae |
Virus name: Canine coronavirus |
| Host: dog |
Authors: Ntafis;V.; Mari;V.; Decaro;N.; Papanastassopoulou;M.; Papaioannou;N.; Mpatziou;R.; Buonavoglia;C. and Xylouri;E. |
| Title: Isolation; tissue distribution and molecular characterization of two recombinant canine coronavirus strains |
Journal: Vet. Microbiol. 151 (3-4); 238-244 (2011) |
| Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| db_xref: """taxon:11153, CDD:279880, CDD:279881""" |
| Sequence: MKFLVFLVIVPLIYGDEFPCSKFTNRTIGNHWNLIETFLLNYSSRLPPSSDVVLGDYFPTVTPWFNCIRNNNNNLYVTMENLKALYWDYATENITADHRQRLHVVIKGNPYSITVTTTRNFDSPEGAIICICKGIPPTTTTADLASQLNCNWGSECRLQHSATQHTKFPICPSNRVSNCGNMLYGLQWFPDEVVAYLHGAIYRINFENQWSGTVTLGDMRATTLETAGTLVDLWWFNPVYDITYYRVNSKNSTTVISNCTEQCSSYVDNIFTTQPGGFIPSDFSFNNWFLLTNRSTVVSGKLVTRQPLLVNCLWPVPSFKEAASTFCFEGSGFDQCNGAVLNNTVDVIRFNLNFTSDVQSGMGATVFTLNTTGGVILEISCYNDTVSESSFYSYGEIPFGITDGPRYCYVLYNSTALKYLGTLPPSVKEIAISKWGHFYINGYNFFSTFPIDCISFNLTTGTSGAFWTIAYTSYTEALVQVENTTIKKVTYCNSHINNIKCSQLTANLQNGFYPVASSEVGLVNKSVVLLPSFYSHTSVNITIDLGMKRSGYGQPIASALSNITLPMQDNNTDVYCIRSNQFSVYVHSTCKSSLWNDVFNSDCTDVLYATAVIKTGTCPFSFDKLNNYLTFNKFCLSLNPVGANCKFDVAARTRTNEQVVRSLYVIYEEGDNTVGVPSDNSGLHDLSVLHLDSCTDYNIYGRTGVGIIRQTNSTLLSGLYYTSLSGDLLGFKNVTDGVVYSVTPCDVSAQAAVIDGAIVGAMTSINSELLGLTHWTTTPNFYYYSIYNYTNARTRGTAIDSNDVDCEPIITYSNIGVCKNGALGFNNVPHSDGDVQPISTGNVTIPTNFTISVQVEYIQVYTTPVSIDCARYVCNGNPRCNKLLTQYVSACQTIEQALAMGARLENMEIDSMLFVSENALKLASVEAFNSTENLDPIYKEWPNIGGSWLGGLKDILPSHNSKRKYRSAIEDLLFDKVVTSGLGTVDEDYKRCTGGYDIADLVCAQYYNGIMVLPGVANDDKMTMYTASLAGGITLGALGGGAVAIPFAVAVQARLNYVALQTDVLNKNQQILANAFNQAIGNITQAFGKVNDAIHQTSKGLATVAKALAKVQDVVNTQGQALSHLTVQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGICASDGDRTFGLVVKDVQLTLFRNLDEKFYLTPRTMYQPRVATSSDFVQIEGCDVLFVNATVIELPSIIPDYIDINQTVQDILENYRPNWTVPELTLDIFNATYLNLTGEINDLEFRSEKLHNTTVELAVLIDNINNTLVNLEWLNRIETYVKWPWYVWLLIGLVVIFCIPLLLFCCCSTGCCGCIGCLGSCCHSICSRRQFENYEPIEKVHVH |
Nucleotide
| Nucleotide_Id: HQ450376.1 |
Length: 4374bp |
| Description: Canine coronavirus strain 66/09 spike protein (S); nonstructural protein 3a; nonstructural protein 3b; nonstructural protein 3c; small envelope protein (E); membrane protein (M); nucleoprotein (N); nonstructural protein 7a; and nonstructural protein 7b genes; complete cds |
Source: Canine coronavirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 21-Jul-11 |
| Class virus: Coronaviridae |
Virus name: Canine coronavirus |
| CDS: HQ450376.1:36..4409 |
Host: dog |
| Authors: Ntafis;V.; Mari;V.; Decaro;N.; Papanastassopoulou;M.; Papaioannou;N.; Mpatziou;R.; Buonavoglia;C. and Xylouri;E. |
Journal: Vet. Microbiol. 151 (3-4); 238-244 (2011) |
| Title: Isolation; tissue distribution and molecular characterization of two recombinant canine coronavirus strains |
db_xref: taxon:11153 |
| Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(8822); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(3); ExactPosition(9); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(35); ExactPosition(4409); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(35); ExactPosition(4409); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4432); ExactPosition(4438); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(4440); ExactPosition(4677); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4621); ExactPosition(4837); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4833); ExactPosition(5568); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5511); ExactPosition(5517); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(5554); ExactPosition(5803); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(5554); ExactPosition(5803); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5804); ExactPosition(5810); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(5813); ExactPosition(6596); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(5813); ExactPosition(6596); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6596); ExactPosition(6602); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(6608); ExactPosition(7757); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(6608); ExactPosition(7757); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(7753); ExactPosition(7759); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(7761); ExactPosition(8067); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8071); ExactPosition(8713); strand=1); type='CDS') |
| Sequence: ATGAAATTTTTGGTGTTTTTAGTTATAGTACCATTGATCTATGGAGATGAATTCCCTTGTTCTAAATTCACTAATAGAACTATAGGCAACCATTGGAATTTGATTGAAACATTTCTTTTAAATTATAGCAGTAGACTACCACCTAGCTCTGATGTGGTGTTAGGTGATTACTTTCCTACTGTGACACCTTGGTTTAATTGCATTCGCAATAATAATAATAATCTTTATGTTACAATGGAAAATCTTAAAGCATTGTACTGGGATTATGCGACAGAAAATATAACAGCAGATCACAGACAAAGGTTACATGTAGTCATTAAAGGTAACCCATATTCTATCACAGTTACCACAACTCGTAATTTTGATTCTCCTGAAGGTGCTATTATATGTATTTGCAAAGGTATACCACCTACTACTACTACCGCCGATTTGGCATCTCAACTGAACTGTAATTGGGGTAGCGAATGCAGGTTACAGCACAGTGCAACCCAACATACAAAATTCCCTATTTGTCCTTCTAATAGGGTATCCAATTGTGGTAATATGTTGTATGGTTTACAATGGTTTCCAGATGAAGTTGTTGCTTATTTACATGGTGCTATTTATCGTATTAATTTTGAAAACCAATGGTCTGGCACTGTCACACTTGGTGATATGCGTGCAACAACTCTTGAAACCGCTGGAACGTTAGTAGACTTGTGGTGGTTCAACCCTGTTTATGACATCACCTACTACAGAGTGAATAGCAAAAACAGCACTACTGTAATCTCCAATTGCACTGAGCAATGTTCTAGTTATGTGGATAACATTTTTACCACACAGCCTGGAGGTTTTATACCATCAGATTTTAGTTTTAACAATTGGTTTCTTTTAACTAATAGGTCCACGGTTGTTAGTGGTAAACTTGTTACCAGACAGCCGCTATTAGTTAATTGTTTATGGCCTGTTCCTAGTTTTAAAGAAGCAGCATCCACATTTTGCTTTGAAGGATCTGGTTTTGATCAGTGTAATGGAGCTGTGCTAAATAACACTGTAGATGTTATTAGATTCAACCTTAATTTCACCTCAGATGTACAATCTGGCATGGGTGCTACAGTGTTCACATTGAATACAACAGGTGGTGTCATTCTTGAAATTTCATGTTATAATGACACAGTGAGTGAGTCTAGTTTTTACAGTTATGGTGAAATTCCATTTGGCATAACTGATGGACCACGGTACTGTTATGTACTTTACAATAGCACAGCTCTTAAGTATTTAGGAACATTACCACCTAGTGTAAAGGAAATTGCTATTAGTAAGTGGGGCCATTTTTATATTAATGGTTACAATTTCTTTAGCACATTTCCTATTGATTGTATATCTTTTAATTTAACTACTGGTACTAGTGGAGCTTTTTGGACAATTGCTTATACATCGTACACTGAAGCATTAGTACAAGTTGAAAACACAACTATTAAAAAGGTGACGTATTGTAACAGTCACATTAACAACATTAAATGTTCTCAACTTACTGCTAATTTGCAAAATGGTTTTTATCCTGTTGCTTCAAGTGAAGTTGGTCTTGTCAATAAGAGTGTTGTGTTACTACCTAGTTTCTATTCACATACCAGTGTTAATATAACTATTGATCTTGGTATGAAGCGTAGTGGTTATGGTCAACCTATAGCCTCAGCATTAAGTAACATCACACTACCGATGCAGGATAATAACACCGATGTGTATTGCATTCGTTCTAATCAATTTTCAGTTTACGTGCATTCCACTTGTAAAAGTTCTTTATGGAACGATGTGTTTAATTCTGACTGCACAGATGTTTTATATGCTACAGCTGTTATAAAAACTGGTACTTGTCCTTTTTCATTTGATAAGTTGAACAATTACTTAACTTTTAATAAGTTTTGTTTGTCATTGAATCCTGTTGGTGCCAACTGCAAGTTTGATGTTGCCGCCCGCACGCGAACCAATGAGCAGGTTGTTAGAAGTTTGTATGTAATATATGAAGAAGGAGACAATACAGTGGGTGTACCGTCTGATAATAGTGGTTTGCACGATTTGTCAGTGTTACACTTAGACTCCTGTACAGATTACAATATATATGGTAGAACTGGTGTTGGTATTATTAGACAAACTAACAGCACACTACTTAGTGGCTTGTATTACACATCACTATCAGGTGATTTGTTAGGTTTTAAAAATGTCACTGACGGTGTTGTCTATTCTGTAACACCATGTGATGTAAGCGCACAAGCTGCTGTTATTGATGGTGCCATAGTTGGAGCTATGACCTCCATTAATAGTGAACTGTTAGGTCTAACTCATTGGACAACAACACCTAATTTTTATTATTACTCCATATATAATTATACAAATGCGAGGACTCGTGGCACTGCAATCGACAGTAACGATGTTGATTGTGAACCTATCATAACCTATTCTAACATAGGTGTTTGTAAAAATGGGGCTTTGGGTTTTAATAACGTCCCACATTCTGATGGAGATGTGCAACCAATTAGCACCGGTAATGTCACGATACCTACAAATTTTACTATATCTGTGCAAGTCGAATATATTCAGGTTTACACTACACCAGTGTCAATAGATTGTGCAAGATACGTTTGCAATGGTAACCCTAGATGCAATAAATTGTTAACACAATATGTTTCCGCATGTCAAACTATTGAGCAAGCACTTGCAATGGGTGCCAGACTTGAAAACATGGAGATCGATTCCATGTTGTTTGTTTCGGAAAATGCCCTTAAATTAGCATCTGTTGAAGCATTCAATAGTACGGAAAATTTAGATCCTATTTATAAAGAATGGCCTAATATTGGTGGTTCTTGGCTAGGAGGTTTAAAAGATATATTGCCATCTCATAATAGCAAACGTAAGTATCGTTCAGCTATAGAAGACTTGCTTTTTGATAAGGTAGTAACATCCGGCTTAGGTACAGTTGATGAAGATTATAAGCGTTGTACAGGTGGTTATGACATAGCTGACTTGGTGTGTGCTCAATATTACAATGGCATCATGGTTCTACCTGGTGTAGCTAATGATGACAAGATGACTATGTACACAGCATCTCTTGCAGGTGGTATAACATTAGGTGCACTAGGCGGTGGTGCCGTGGCTATACCTTTTGCAGTAGCAGTTCAGGCTAGACTTAATTATGTTGCTCTACAAACTGATGTATTGAACAAAAACCAGCAGATCCTGGCTAATGCTTTCAATCAAGCGATTGGTAACATTACACAGGCATTTGGTAAGGTTAATGATGCTATACATCAAACGTCAAAAGGTCTTGCTACTGTTGCTAAAGCATTGGCAAAAGTGCAAGATGTTGTTAACACACAAGGGCAAGCTTTAAGCCACCTAACAGTACAATTGCAAAATAATTTTCAAGCCATTAGTAGTTCCATTAGTGACATTTATAACAGGCTTGATGAGTTGAGTGCGGATGCACAAGTTGACAGGCTGATTACAGGACGACTTACAGCACTTAATGCATTTGTGTCTCAGACTTTAACCAGACAAGCAGAGGTTAGGGCTAGTAGACAACTTGCTAAAGACAAAGTTAATGAATGCGTTAGGTCTCAATCCCAAAGATTTGGATTCTGTGGTAATGGTACACATTTGTTTTCACTTGCAAATGCAGCACCAAATGGCATGATTTTCTTTCACACAGTGCTATTACCAACAGCTTATGAAACTGTGACGGCCTGGTCAGGTATTTGTGCATCAGATGGCGATCGCACTTTCGGACTTGTTGTTAAAGATGTCCAGCTGACGCTATTTCGCAATTTAGATGAAAAATTCTATTTGACTCCCAGAACTATGTATCAGCCTAGAGTTGCAACTAGTTCTGATTTTGTTCAAATTGAAGGGTGCGATGTCTTGTTTGTCAATGCAACTGTAATTGAGTTGCCTAGCATTATACCTGATTATATCGATATTAATCAGACTGTTCAAGACATATTAGAAAATTATAGACCAAATTGGACAGTACCTGAATTAACACTTGACATTTTCAACGCAACCTACTTAAACCTGACTGGTGAAATTAATGACTTAGAATTCAGGTCAGAAAAGCTACATAACACCACGGTAGAACTTGCTGTTCTCATTGACAATATTAACAATACATTGGTCAATCTTGAATGGCTCAATAGAATTGAAACTTATGTAAAATGGCCTTGGTATGTATGGCTACTAATAGGCTTAGTAGTAATATTTTGCATACCATTACTGCTATTTTGCTGTTGTAGTACAGGTTGCTGTGGGTGCATAGGTTGCTTAGGAAGTTGTTGTCACTCTATTTGTAGTAGAAGACAATTTGAAAATTATGAACCAATTGAGAAAGTGCATGTCCATTAA |