| Protein Id: AEE69322.1 |
Length: 1454 aa |
| Description: S protein Canine coronavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 23-Feb-12 |
| Source: Canine coronavirus |
| Class virus: Coronaviridae |
Virus name: Canine coronavirus |
| Host: dog |
Authors: Ntafis;V.; Xylouri;E.; Mari;V.; Papanastassopoulou;M.; Papaioannou;N.; Thomas;A.; Buonavoglia;C. and Decaro;N. |
| Title: Molecular characterization of a canine coronavirus NA/09 strain detected in a dog's organs |
Journal: Arch. Virol. 157 (1); 171-175 (2012) |
| Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| db_xref: """taxon:11153, CDD:279880, CDD:279881""" |
| Sequence: MIVIVTCILSLFSYHTVASTTNNDCRQVNVTQLDGNENLIRDFLFQNFKEEGTVVVGGYYPTEVWYNCSRTAHTTAYEYFNNIHAFYFDMEAMENSTGNARGKPLLFHVHGEPVSVIIYISAYRDDVQNRPLLKHGLVCITKTRNIDYNSFTSSQWNSICTGNDRKISFSVIPTDNGTKIYGLEWNDELVTAYISGRSYNWNINNNWFNNVTLLYSRSSTATWQHSAAYVYQGVSNFTYYKLNNTNGLKTYEFCEDYEYCTGYATNVFAPTVGGYIPDGFSFNNWFLLTNGSTFVSGRFVTNQPLLVNCLWPVPSFGVAAQEFCFEGAQFSQCNGVSLNNTVDVIRFNLNFTADVQSGMGATVFSLNTTGGVILEISCYNDTVSESSFYSYGEIPFGITDGPRYCYVLYNGTALKYLGTLPPSVKEIAISKWGHFYINGYNFFSTFPIDCISFNLTTGTSGAFWTIAYTSYTEALVQVENTAIKKVTYCNSHINNIKCSQLTANLQNGFYPVASSEVGLVNKSVVLLPSFYSHTSVNITIDLGMKRSGYGQPIASALSNITLPMQDNNTDVYCIRSNQFSVYVHSTCKSSLWDNVFNSDCTDVLYATAVIKTGTCPFSFDKLNNYLTFNKFCLSLNPVGANCKFDVAARTRTNEQVVRSLYVIYEEGDNTVGVPSDNSGLHDLSVLHLDSCTDYNIYGRTGVGIIRQTNSTLLSGLYYTSLSGDLLGFKNVTDGVVYSVTPCDVSAQAAVIDGAIVGAMTSINSELLGLTHWTTTPNFYYYSIYNYTNARTRGTAIDSNDVDCEPIITYSNIGVCKNGALVFINVTHSDGDVQPISTGNVTIPTNFTISVQVENIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQTIEQALAMGARLENMEVDSMLFVSENALKLASVEAFNSTEHLDPIYKEWPNIGGSWLGGLKDILPSHNSKRKYRSAIEDLLFDKVVTSGLGTVDEDYKRCTGGYDIADLVCAQYYNGIMVLPGVANDDKMTMYTASLAGGITLGALGGGAVAIPFAVAVQARLNYVALQTDVLNKNQQILANAFNQAIGNITQAFGKVNDAIHQTSKGLATVAKALAKVQDVVNTQGQALSHLTVQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGICASDGDRTFGLVVKDVQLTLFRNLDDKFYLTPRTMYQPRVATSSDFVQIEGCDVLFVNATVIELPSIIPDYIDINQTVQDILENYRPNWTVPELTLDIFNATYLNLTGEIYDLEFRSEKIHNTTVELAVLIDNINNTLVNLEWLNRIENYVKWPWYVWLLIGLVVIFCIPLLLFCCCSTGCCGCIGCLGSCCHSICSRRQFENYEPIEKVHVH |
Nucleotide
| Nucleotide_Id: JF682842.1 |
Length: 4365bp |
| Description: Canine coronavirus strain NA/09 S protein (S); nsp3a; nsp3b; nsp3c; E protein (E); M protein (M); N protein (N); nsp7a; and nsp7b genes; complete cds |
Source: Canine coronavirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 23-Feb-12 |
| Class virus: Coronaviridae |
Virus name: Canine coronavirus |
| CDS: JF682842.1:43..4407 |
Host: dog |
| Authors: Ntafis;V.; Xylouri;E.; Mari;V.; Papanastassopoulou;M.; Papaioannou;N.; Thomas;A.; Buonavoglia;C. and Decaro;N. |
Journal: Arch. Virol. 157 (1); 171-175 (2012) |
| Title: Molecular characterization of a canine coronavirus NA/09 strain detected in a dog's organs |
db_xref: taxon:11153 |
| Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(8809); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(10); ExactPosition(16); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(42); ExactPosition(4407); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(42); ExactPosition(4407); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4430); ExactPosition(4436); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(4438); ExactPosition(4675); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4619); ExactPosition(4835); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4831); ExactPosition(5566); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5509); ExactPosition(5515); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(5552); ExactPosition(5801); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(5552); ExactPosition(5801); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5802); ExactPosition(5808); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(5811); ExactPosition(6600); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(5811); ExactPosition(6600); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6600); ExactPosition(6606); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(6612); ExactPosition(7761); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(6612); ExactPosition(7761); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(7757); ExactPosition(7763); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(7765); ExactPosition(8071); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8075); ExactPosition(8717); strand=1); type='CDS') |
| Sequence: ATGATTGTGATCGTAACTTGCATCCTATCGTTGTTCTCGTACCACACTGTTGCGAGTACGACAAATAATGATTGTAGACAAGTTAACGTAACACAATTAGATGGCAACGAAAATCTCATTAGAGACTTTTTGTTTCAAAACTTTAAAGAAGAAGGAACTGTAGTTGTTGGTGGCTATTATCCTACAGAGGTGTGGTACAACTGTTCTAGAACAGCACATACCACTGCCTATGAGTATTTTAATAACATACATGCATTTTATTTTGATATGGAAGCCATGGAAAATAGCACTGGTAATGCACGTGGTAAACCGCTATTGTTTCATGTTCATGGTGAGCCTGTTAGTGTTATCATATATATTTCAGCTTATAGAGATGATGTACAAAACAGGCCACTTTTAAAACATGGTTTAGTGTGCATAACTAAAACTCGCAATATTGACTATAACAGTTTCACTAGTAGCCAGTGGAATTCCATATGTACAGGTAATGACAGAAAAATATCTTTCTCTGTCATACCCACTGACAATGGAACAAAAATTTATGGACTTGAGTGGAATGATGAACTTGTTACAGCCTATATTAGTGGTCGTTCCTATAATTGGAACATCAATAATAATTGGTTTAACAATGTTACACTTTTGTACTCCCGCTCAAGTACTGCTACATGGCAACACAGTGCTGCGTATGTTTACCAAGGTGTCTCTAACTTCACTTATTACAAGTTAAATAACACCAATGGTTTAAAAACTTATGAATTTTGCGAGGATTATGAGTATTGCACTGGCTACGCTACTAATGTCTTTGCTCCCACTGTGGGAGGTTACATACCTGATGGATTTAGTTTTAACAATTGGTTTTTGCTCACAAATGGCTCCACTTTTGTTAGTGGCAGATTTGTAACAAATCAACCATTATTAGTTAATTGTTTATGGCCAGTGCCCAGTTTTGGTGTGGCAGCACAAGAATTTTGTTTTGAAGGTGCGCAGTTTAGTCAGTGCAATGGTGTGTCTTTAAATAACACGGTGGATGTTATTAGATTCAATCTTAATTTTACCGCAGATGTACAATCTGGCATGGGTGCTACAGTGTTCTCACTGAATACAACAGGTGGTGTCATTCTTGAAATTTCATGTTATAATGACACAGTGAGTGAGTCTAGTTTTTACAGTTATGGTGAAATTCCATTTGGCATAACTGATGGACCACGGTACTGTTATGTACTTTACAATGGCACAGCTCTTAAGTATTTAGGAACATTACCACCTAGTGTAAAGGAAATTGCTATTAGTAAGTGGGGCCATTTTTATATTAATGGTTACAATTTCTTTAGCACATTTCCTATTGATTGTATATCTTTTAATTTAACCACTGGTACTAGTGGAGCTTTTTGGACAATTGCTTACACATCGTACACTGAAGCATTAGTACAAGTTGAAAACACAGCTATTAAAAAGGTGACGTATTGTAACAGTCACATTAATAACATTAAATGTTCTCAACTTACTGCTAACTTGCAAAATGGTTTTTATCCTGTTGCTTCAAGTGAAGTTGGTCTTGTCAATAAGAGTGTTGTGTTACTACCTAGTTTTTATTCACATACCAGTGTTAATATAACTATTGATCTTGGTATGAAGCGTAGTGGTTATGGTCAACCTATAGCCTCAGCATTAAGTAACATCACACTACCGATGCAGGATAATAACACCGATGTGTATTGCATTCGTTCTAATCAATTTTCAGTTTATGTGCATTCCACTTGTAAAAGTTCTTTATGGGACAATGTGTTTAATTCTGACTGCACAGATGTTTTATATGCTACAGCTGTTATAAAAACTGGTACTTGTCCTTTCTCATTTGATAAGTTGAACAATTACTTAACTTTTAATAAGTTTTGTTTGTCATTGAATCCTGTTGGTGCCAACTGCAAGTTTGATGTTGCCGCCCGCACGCGAACCAATGAGCAGGTTGTTAGAAGTTTGTATGTAATATATGAAGAAGGAGACAATACAGTGGGTGTACCGTCTGATAATAGTGGTTTGCACGATTTGTCAGTGTTACACTTAGACTCCTGTACAGATTACAATATATATGGTAGAACTGGTGTTGGTATTATTAGACAAACTAACAGCACACTACTTAGTGGCTTGTATTACACATCACTATCAGGTGATTTGTTAGGTTTTAAAAATGTCACTGACGGTGTTGTCTATTCTGTAACACCATGTGATGTAAGCGCACAAGCTGCTGTTATTGATGGTGCCATAGTTGGAGCTATGACCTCCATTAATAGTGAACTGTTAGGTCTAACTCATTGGACAACAACACCTAATTTTTATTATTACTCCATATATAATTATACAAATGCGAGAACTCGTGGCACTGCAATCGACAGTAACGATGTTGATTGTGAACCTATCATAACCTATTCTAACATAGGTGTTTGTAAAAATGGTGCTTTGGTTTTTATTAACGTCACACATTCTGATGGAGATGTGCAACCAATTAGCACCGGTAATGTCACGATACCTACAAATTTTACTATATCTGTGCAAGTCGAAAATATTCAGGTTTACACTACACCAGTGTCAATAGACTGTTCAAGATACGTCTGCAATGGTAATCCTAGATGCAATAAGTTGTTAACACAATATGTCTCTGCATGTCAAACTATTGAGCAAGCACTTGCAATGGGTGCCAGACTTGAAAACATGGAAGTTGATTCCATGTTGTTTGTTTCTGAAAATGCCCTTAAATTGGCATCTGTTGAGGCATTCAATAGTACAGAACATCTAGATCCTATTTACAAAGAATGGCCTAATATAGGTGGTTCTTGGCTAGGAGGTTTAAAAGACATACTTCCGTCCCATAATAGCAAACGTAAGTATCGTTCTGCTATAGAAGATTTGCTTTTTGACAAGGTTGTGACATCTGGCTTAGGTACAGTCGATGAGGATTACAAACGTTGTACGGGTGGCTATGACATAGCTGATTTAGTTTGTGCTCAATATTACAATGGCATCATGGTGTTACCTGGTGTAGCTAATGATGACAAGATGACTATGTATACAGCATCGCTTGCAGGTGGTATAACATTAGGTGCACTGGGTGGTGGTGCCGTGGCTATACCGTTTGCAGTAGCAGTTCAGGCTAGACTTAATTATGTAGCTCTACAAACTGATGTTTTGAATAAAAATCAGCAAATCCTGGCTAATGCCTTCAATCAGGCTATTGGTAACATTACACAGGCATTTGGTAAGGTTAATGATGCTATACATCAAACGTCAAAAGGCCTGGCTACTGTTGCTAAAGCATTGGCAAAAGTGCAAGATGTTGTTAACACACAAGGGCAAGCTTTAAGCCACCTAACAGTACAATTGCAAAATAATTTTCAAGCCATTAGTAGTTCCATTAGTGACATTTATAACAGGCTTGATGAGTTGAGTGCGGATGCACAAGTTGACAGGCTGATTACAGGACGACTTACAGCACTTAATGCATTTGTGTCTCAGACTTTAACCAGACAAGCAGAGGTTAGGGCTAGTAGACAACTTGCTAAAGACAAAGTTAATGAATGCGTTAGGTCTCAATCCCAAAGATTTGGATTCTGTGGTAATGGTACACATTTGTTTTCACTTGCAAATGCAGCACCAAATGGCATGATTTTCTTTCACACAGTGCTATTACCAACAGCTTATGAAACTGTGACGGCCTGGTCAGGTATTTGTGCATCAGATGGCGATCGCACTTTCGGACTTGTTGTTAAAGATGTCCAGCTGACGCTATTTCGCAATTTAGATGACAAATTCTATTTGACTCCTAGAACTATGTATCAGCCTAGAGTTGCAACTAGTTCTGATTTTGTTCAAATTGAAGGGTGCGATGTCTTGTTTGTCAATGCAACTGTAATTGAGTTGCCTAGCATTATACCTGATTATATCGATATTAATCAGACTGTTCAAGACATATTAGAAAATTATAGACCAAATTGGACAGTACCTGAATTAACACTTGACATTTTCAACGCAACCTACTTAAACCTGACTGGTGAAATTTATGACTTAGAATTCAGGTCAGAAAAGATACATAACACCACGGTAGAACTTGCTGTTCTCATTGACAATATTAACAATACATTAGTCAATCTTGAATGGCTCAATAGAATTGAAAATTATGTAAAATGGCCTTGGTATGTATGGCTACTAATAGGCTTAGTAGTAATATTTTGCATACCATTACTGCTATTTTGCTGTTGTAGTACAGGTTGCTGTGGGTGCATAGGTTGCTTAGGAAGTTGTTGTCACTCTATTTGTAGTAGAAGACAATTTGAAAATTATGAACCAATTGAGAAAGTGCATGTCCATTAA |