Protein Id: AEO99179.1 |
Length: 212 aa |
Description: spike protein, partial Canine coronavirus. |
Molecule type: linear |
Data category: VRL |
Date: 25-Jul-16 |
Source: Canine coronavirus |
Class virus: Coronaviridae |
Virus name: Canine coronavirus |
Host: Crocuta crocuta (spottted hyena) |
Authors: Goller;K.V.; Fickel;J.; Hofer;H.; Lorenz;S. and East;M.L. |
Title: Genetic diversity; temporal change and host-species specificity of coronavirus variants in wild African carnivores |
Journal: Unpublished |
Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
db_xref: """taxon:11153, CDD:279881""" |
Sequence: TRLAEVSASRQLAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGICASDGNSTFGLVVKDVQLTLFRNLDDKFYLTPRTMYQPRVATSSDFVRIEGCDVLFVNATVIDLPSIIPDYIDINQTVQDILENFRPNWTVPELTLDIFNATYLNLTGEINDLEFRSEKLHNTTVELAVLIDNINNTLVNLEW |
Nucleotide
Nucleotide_Id: HQ339892.1 |
Length: 636bp |
Description: Canine coronavirus strain 44/07 spike protein (S) gene; partial cds |
Source: Canine coronavirus |
Nucleotide_type: RNA |
Molecule type: linear |
Data category: VRL |
Date: 25-Jul-16 |
Class virus: Coronaviridae |
Virus name: Canine coronavirus |
CDS: HQ339892.1:<1..>636 |
Host: Crocuta crocuta (spottted hyena) |
Authors: Goller;K.V.; Fickel;J.; Hofer;H.; Lorenz;S. and East;M.L. |
Journal: Unpublished |
Title: Genetic diversity; temporal change and host-species specificity of coronavirus variants in wild African carnivores |
db_xref: taxon:11153 |
Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(636); strand=1); type='source'); SeqFeature(FeatureLocation(BeforePosition(0); AfterPosition(636); strand=1); type='gene'); SeqFeature(FeatureLocation(BeforePosition(0); AfterPosition(636); strand=1); type='CDS') |
Sequence: ACCAGACTAGCAGAGGTTAGTGCTAGTAGACAACTTGCTAAAGACAAGGTTAATGAATGCGTTAGGTCTCAATCCCAGAGATTTGGATTCTGTGGTAATGGTACACATTTGTTTTCACTTGCAAATGCAGCACCAAATGGCATGATTTTCTTTCACACGGTGCTATTACCAACAGCTTATGAAACTGTGACGGCCTGGTCAGGTATTTGTGCGTCAGATGGCAATAGCACTTTTGGACTTGTTGTTAAGGATGTTCAGCTGACGCTATTTCGCAATTTAGATGACAAATTCTACTTGACTCCTCGAACTATGTATCAGCCCAGAGTTGCAACTAGTTCTGATTTTGTTCGAATAGAAGGTTGTGATGTGTTGTTTGTCAATGCAACTGTAATTGACTTGCCTAGTATTATACCTGACTATATTGATATTAATCAAACTGTTCAGGACATATTAGAAAATTTTAGACCAAATTGGACTGTACCTGAGTTGACACTTGATATTTTTAACGCAACCTACTTAAACCTGACTGGTGAAATTAATGACTTAGAATTTAGGTCAGAGAAGCTACATAATACCACGGTAGAACTTGCTGTTCTTATTGACAATATTAATAATACATTAGTCAATCTTGAATGG |