| Protein Id: AEQ61968.1 |
Length: 1473 aa |
| Description: spike protein Canine coronavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 26-Sep-14 |
| Source: Canine coronavirus |
| Class virus: Coronaviridae |
Virus name: Canine coronavirus |
| Host: Canis lupus familiaris |
Authors: Regan;A.D.; Millet;J.K.; Tse;L.P.; Chillag;Z.; Rinaldi;V.D.; Licitra;B.N.; Dubovi;E.J.; Town;C.D. and Whittaker;G.R. |
| Title: Characterization of a recombinant canine coronavirus with a distinct receptor-binding (S1) domain |
Journal: Virology 430 (2); 90-99 (2012) |
| Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| db_xref: """taxon:11153, CDD:279880, CDD:279881""" |
| Sequence: MKVLLFLALFSIARCDNAAGPHSHPKYFNTSFDNQRFEASMYNFLKSWDIPPNTDTILGGYLPYCGVGSHCGWVNIAGINKSSIDRVGYFDSLQLGIPNVHGVYFDVREFNSDNNVWDPQEKVGLAIVIYGSSYYDLFMYLSNNVQENVQAVSVKICHWTSGSINNTVWYAAGINGLDQGSTSDCVFNRRFSLDVKLITSDFYGFQWTQDYVTIYLGGTTTRFWVENSWNKVQVKLSNHWSQATYGYYVQLVNKITYYIYNNTAGDAVNTLQLIECNRDSNSYCAGYNKNVFKPSSQGYIPEDFSFNNWFVLTNKSSVLEGSFLSNQPLLVKCVVPVPAFEAASQQFCFNNGYCGDVNLNDSVDVLRFNLNFTEDVVSNSGANMFTINTTAGLELVISCYNQIMTRNLNLLEDGAFIPFGVNDKPTYCYVDINNTAVKFIGSLPPSVREIAISKYGHFYINGYRYFSTFPINCVSFNLTAGGNFWTVTYTSYTDVLLNVKDANIKRLTYCDSPVNGIKCSQLTPDLNNGFYPVSPRAVGLVKKSVVVLPSFIYHSELNVSVTLGVKKSGYGQPIISYKSNFSISYSVNDNETEQFCISTNQFSVSLQVECKSGGWSDNFDNGCDNALYAEASITSGTCPFSFDKINNYLGFEKLCFSTVPTGSDCYFEVLGKTHFSSNVVGNLYVTYNFGTSILGVPTAYSGLADTSQLYLDQCTDYSIYGHTGTGIIRQTNSSVLTGLYYTSLSGDLLGFKNVSTGEVYSVVPCELSAQAAIINNNIVGAMTTVNSPLLGLNNYIVTPSFYYYSIYGYNNSRSMAVEVQCQPIITYSNIGVCDNGALVFVNITHADGDVQPISTGNVTIPTNFTISVQLEYLQVYTDPVSVDCARYVCNGNPRCNQLLTQYISACQTIEQALAMSARLENMEVESMLFVSENALQIASVEAFNSSDKLDPIYQEWPNIGGSWLGGLKDILPSHNSNKRKFRSTIEDLLFDKVVTSGLGTVDEDYKRCTGGYDIADLVCAQYYNGIMVLPGVANDDKMTMYTASLAGGITLGALSGGAVAIPFAVAVQARLNYVALQTDVLNKNQQILANAFNQAIGNITQAFGKVNDAIHQTSQGLATVAKALAKVQDVVNTQGQALSHLTVQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGICASDGDRTFGLVVKDVQLTLFRNLDDKFYLTPRTMYQPRVATSSDFVQIEGCDVLFVNATVIDLPSIIPDYIDINQTVQDILENYRPNWTVPELTLDIFNATYLNLTGEIDDLEFRSEKLHNTTVELAILIDNINNTLVNLEWLNRIETYVKWPWYVWLLIGLVVIFCIPLLLFCCCSTGCCGCIGCLGSCCHSICSRRQFENYEPIEKVHVH |
Nucleotide
| Nucleotide_Id: JN856008.2 |
Length: 4422bp |
| Description: Canine coronavirus strain A76; complete genome |
Source: Canine coronavirus |
| Nucleotide_type: ss-RNA |
Molecule type: linear |
| Data category: VRL |
Date: 26-Sep-14 |
| Class virus: Coronaviridae |
Virus name: Canine coronavirus |
| CDS: JN856008.2:20324..24745 |
Host: Canis lupus familiaris |
| Authors: Regan;A.D.; Millet;J.K.; Tse;L.P.; Chillag;Z.; Rinaldi;V.D.; Licitra;B.N.; Dubovi;E.J.; Town;C.D. and Whittaker;G.R. |
Journal: Virology 430 (2); 90-99 (2012) |
| Title: Characterization of a recombinant canine coronavirus with a distinct receptor-binding (S1) domain |
db_xref: taxon:11153 |
| Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(29271); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(276); ExactPosition(20327); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(276); ExactPosition(12297); strand=1); FeatureLocation(ExactPosition(12296); ExactPosition(20327); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(276); ExactPosition(606); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(606); ExactPosition(2913); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(2913); ExactPosition(7437); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(7437); ExactPosition(8907); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(8907); ExactPosition(9813); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(9813); ExactPosition(10695); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(10695); ExactPosition(10944); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(10944); ExactPosition(11529); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(11529); ExactPosition(11862); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(11862); ExactPosition(12267); strand=1); type='mat_peptide'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(12267); ExactPosition(12297); strand=1); FeatureLocation(ExactPosition(12296); ExactPosition(15053); strand=1); 'join'); type='mat_peptide'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(15053); ExactPosition(16850); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(16850); ExactPosition(18407); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(18407); ExactPosition(19424); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(19424); ExactPosition(20324); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(276); ExactPosition(12327); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(276); ExactPosition(12327); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(12267); ExactPosition(12324); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(20323); ExactPosition(24745); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20323); ExactPosition(24745); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24813); ExactPosition(25029); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24813); ExactPosition(25029); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24973); ExactPosition(25139); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25135); ExactPosition(25870); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25135); ExactPosition(25870); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25856); ExactPosition(26105); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25856); ExactPosition(26105); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26115); ExactPosition(26901); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26115); ExactPosition(26901); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26913); ExactPosition(28062); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26913); ExactPosition(28062); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28066); ExactPosition(28372); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28066); ExactPosition(28372); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28376); ExactPosition(29018); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28376); ExactPosition(29018); strand=1); type='CDS') |
| Sequence: ATGAAAGTACTGCTATTTTTAGCGTTATTTTCTATTGCCCGGTGTGACAATGCAGCTGGACCACATAGCCATCCCAAATATTTTAACACTTCCTTTGATAACCAAAGATTTGAAGCTAGTATGTATAACTTTTTAAAGTCTTGGGACATCCCACCTAATACAGATACAATTTTAGGTGGTTACTTACCATATTGTGGTGTAGGAAGCCACTGTGGTTGGGTTAATATAGCTGGAATAAATAAATCGTCCATTGATCGAGTAGGTTATTTCGATTCTTTACAATTAGGAATACCTAATGTTCATGGTGTTTATTTTGATGTACGTGAGTTTAATTCAGATAATAATGTTTGGGATCCTCAAGAGAAGGTTGGTTTGGCTATTGTTATATATGGAAGTTCATACTATGACCTTTTCATGTATTTATCTAACAATGTTCAAGAGAACGTCCAAGCTGTTTCTGTCAAAATTTGCCATTGGACTAGTGGCAGTATTAATAACACTGTATGGTATGCAGCTGGTATTAATGGTTTAGACCAAGGCAGCACATCAGATTGTGTTTTTAACAGACGGTTTTCACTTGATGTGAAATTGATTACTAGTGATTTCTATGGTTTCCAGTGGACACAAGATTATGTCACTATCTATCTAGGTGGTACTACAACTAGATTTTGGGTTGAAAATAGTTGGAATAAAGTTCAAGTTAAACTCTCAAACCATTGGTCACAAGCTACCTATGGTTATTATGTTCAATTAGTAAATAAAATCACATATTACATCTATAATAACACAGCTGGCGATGCAGTTAACACACTTCAGCTTATTGAGTGTAATCGTGATAGCAATAGTTATTGTGCAGGCTATAATAAAAATGTTTTTAAGCCCTCATCACAAGGTTATATACCTGAAGATTTTAGTTTTAATAATTGGTTTGTTCTAACTAATAAGTCTTCAGTCTTAGAAGGTTCATTTCTTTCTAACCAACCATTATTAGTAAAATGTGTTGTACCTGTACCAGCTTTCGAGGCTGCTAGTCAACAATTTTGCTTTAATAATGGTTACTGTGGTGATGTTAATTTAAATGATAGCGTTGATGTTCTTAGGTTCAACCTAAATTTCACAGAAGATGTAGTTTCTAATAGTGGTGCCAACATGTTCACTATTAACACTACAGCAGGTTTGGAATTGGTTATTTCTTGTTATAATCAAATTATGACAAGAAATTTAAACCTTTTAGAAGATGGAGCTTTTATACCATTTGGTGTTAATGATAAACCTACATACTGTTATGTAGATATTAATAACACAGCAGTTAAATTTATTGGTTCACTACCACCTAGTGTTAGAGAAATTGCTATAAGTAAATATGGTCATTTTTATATCAATGGCTATAGGTACTTTAGCACGTTTCCTATTAATTGTGTGTCATTTAATTTAACTGCAGGTGGTAATTTTTGGACTGTAACTTACACATCGTACACTGATGTATTGTTAAACGTTAAGGACGCTAATATTAAGCGTTTAACTTATTGTGACAGTCCAGTTAACGGTATAAAATGCTCACAACTGACACCAGACCTTAATAATGGTTTTTACCCTGTGTCCCCACGTGCTGTAGGCCTTGTTAAGAAGTCTGTTGTAGTGCTACCTTCATTTATATACCACTCTGAACTTAACGTTTCAGTCACTCTTGGTGTTAAGAAGAGTGGGTATGGTCAACCTATTATCTCCTATAAGAGCAATTTTAGCATCTCTTATAGTGTTAATGACAACGAAACTGAGCAGTTTTGTATTTCAACAAACCAATTCTCCGTTTCTTTGCAGGTTGAGTGTAAGAGTGGTGGTTGGTCTGACAACTTTGATAACGGTTGTGATAATGCTTTGTATGCAGAAGCTAGTATCACAAGTGGCACCTGTCCTTTCTCTTTTGATAAAATTAATAATTATTTAGGTTTTGAAAAATTGTGTTTTTCAACTGTTCCCACTGGTTCTGATTGTTATTTTGAAGTACTTGGTAAAACTCATTTTAGTAGCAATGTTGTAGGTAACTTATATGTTACCTATAATTTTGGTACTTCTATATTGGGTGTCCCTACTGCTTATAGCGGTTTGGCTGATACTAGCCAATTGTACTTAGACCAGTGTACAGATTATAGCATTTATGGTCACACAGGTACTGGTATTATACGACAAACTAATTCTTCAGTGTTAACGGGCCTTTATTACACATCATTGTCAGGTGATCTTTTAGGCTTTAAAAATGTTAGCACTGGTGAAGTTTACTCTGTCGTGCCATGTGAACTTAGTGCTCAAGCTGCTATTATAAATAATAATATAGTAGGTGCTATGACCACAGTTAATAGTCCATTACTAGGCCTTAATAATTATATTGTCACACCTAGTTTTTACTATTATTCTATCTATGGTTATAACAATTCTAGATCCATGGCTGTGGAAGTACAGTGCCAGCCTATTATCACTTACTCCAATATTGGCGTTTGTGACAATGGAGCACTTGTTTTTGTTAACATTACTCATGCTGATGGAGATGTGCAACCTATTAGCACTGGCAATGTTACAATCCCTACTAATTTTACTATTTCTGTGCAGCTTGAATATTTACAAGTTTACACTGACCCTGTTTCTGTGGACTGCGCGCGCTATGTGTGTAACGGAAATCCTCGTTGTAACCAGTTACTAACACAATACATTTCTGCATGTCAAACTATTGAACAAGCTCTTGCAATGAGTGCTAGACTCGAAAACATGGAGGTTGAATCCATGTTGTTTGTCTCGGAAAATGCCCTACAAATTGCATCTGTTGAAGCATTCAATAGTTCAGACAAATTAGATCCTATTTATCAAGAGTGGCCTAATATAGGTGGCTCTTGGTTAGGTGGTTTAAAAGATATACTTCCGTCACACAATTCTAATAAGCGCAAGTTCAGATCAACCATAGAAGATTTGCTTTTTGATAAGGTTGTAACTTCTGGTTTAGGTACAGTTGATGAGGATTATAAGCGTTGTACAGGTGGTTATGACATAGCCGATTTAGTGTGTGCACAATATTACAATGGCATCATGGTGTTACCTGGTGTAGCTAATGATGACAAAATGACTATGTACACAGCATCTCTTGCAGGTGGTATAACATTAGGTGCACTAAGTGGTGGCGCCGTGGCTATACCTTTTGCAGTAGCAGTTCAGGCTAGACTTAATTATGTTGCTCTACAAACTGATGTATTGAACAAAAACCAGCAGATCCTGGCTAATGCTTTCAATCAAGCTATTGGTAACATTACACAGGCATTTGGTAAGGTTAATGATGCCATACATCAAACATCGCAAGGTCTGGCCACTGTTGCTAAAGCATTGGCAAAAGTGCAAGATGTTGTCAACACACAAGGGCAGGCTTTAAGCCACCTAACAGTACAATTGCAAAATAATTTTCAAGCCATTAGTAGTTCTATTAGTGACATTTATAACAGGCTTGATGAACTGAGTGCTGATGCACAAGTTGATAGGCTGATTACAGGAAGACTTACAGCACTTAATGCATTTGTGTCTCAGACTCTAACCAGACAAGCTGAGGTTAGGGCTAGTAGACAACTTGCCAAAGACAAGGTTAATGAATGCGTTAGGTCTCAGTCTCAGAGATTCGGATTCTGTGGTAATGGTACACATTTGTTTTCACTTGCAAACGCAGCACCAAATGGCATGATTTTCTTTCACACAGTGCTATTACCAACGGCTTATGAAACTGTAACGGCTTGGTCAGGTATTTGTGCTTCAGATGGCGATCGCACTTTTGGACTTGTCGTTAAAGATGTCCAGTTGACGTTGTTTCGTAATCTAGATGACAAGTTCTATTTGACTCCCAGAACTATGTACCAGCCTAGAGTTGCAACTAGTTCTGATTTTGTTCAAATTGAAGGGTGCGATGTGTTGTTTGTCAATGCAACTGTAATTGACTTGCCTAGTATTATACCTGACTATATTGATATTAATCAGACTGTTCAAGATATATTAGAAAATTACAGACCAAACTGGACTGTACCTGAATTGACACTTGACATTTTTAACGCAACCTATTTAAATCTGACTGGTGAAATTGATGACTTAGAATTTAGGTCAGAAAAGCTACACAACACTACTGTAGAACTTGCCATTCTCATTGACAACATTAATAATACATTAGTCAATCTTGAATGGCTCAATAGAATTGAAACTTATGTAAAATGGCCTTGGTATGTATGGCTACTAATAGGCTTAGTAGTAATATTTTGCATACCGCTATTGCTATTTTGCTGTTGTAGTACAGGTTGCTGTGGCTGCATAGGTTGTTTAGGAAGTTGCTGTCACTCTATATGTAGTAGAAGACAGTTTGAAAATTATGAACCAATTGAAAAAGTGCACGTCCACTAG |