| Protein Id: QJI07106.1 |
Length: 1453 aa |
| Description: spike protein Canine coronavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 6-May-20 |
| Source: Canine coronavirus |
| Class virus: Coronaviridae |
Virus name: Canine coronavirus |
| Host: canine |
Authors: He;H.J.; Zhang;W.; Liang;J.; Lu;M.; Wang;R.; Li;G.; He;J.W.; Chen;J.; Xing;G. and Chen;Y. |
| Title: Etiology and genetic evolution of canine coronavirus circulating in five provinces of China; during 2018-2019 |
Journal: Microb Pathog (2020) In press |
| Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| Sequence: MIVLTLFILLVSHTNVYCTTNSDCVQVNVTQLPGNENIIKDFLFNNFKEEGTVVVGGYYPTEVWYNCSRTATTTAYEYFSNIHAFYFDMEAMENSTGNARGKPLLFHVHGEPVSVIIYISAYRDDVQHRPLLKHGLVCITESRNIDYNSFTSRQWNSICTGNDRKIPFSVIPTDNGTKIYGLEWNDESVTAYISGRSHNLNINTNWFNNVTLLYSRSSTATWQKSSAYVYQGVSNFTYYKLNNTNGLKIYELCENYEYCTGYATNVFAPTVGGYIPDGFSFNNWFLLTNSSTFVSGRFVTNQPLLVNCLWPVPSFGVAAQEFCFEGAKFSQCNGVSLNNTVDVIRFNLNFTADVQSGMGATVFSLNTAGGVILEISCYNDTVSESSFYSYGEIPFGVTDGPRYCYVLYNGTALKYLGTLPPSVKEIAISKWGHFYINGYNFFSTFPIDCISFNLTTGASGAFWTIAYTSYTEALVQVENTAIKKVTYCNSHINNIKCSQLTANLQNGFYPVASSEVGLVNKSVVLLPSFYSHTSVNITIDLGMKRSGYGQPIASTLSNITLPMQDNNTDVYCIRSNQFSVYTHSTCKSSLWDNNFNQDCTDVLYATAVIKTGTCPFSFDKLNNYLTFNKFCLSLNPTGANCKFDVAARTRTNEQVVRSLYVIYEEGDNIVGVPSDNSGLHDLSVLHLDSCTDYNIYGRTGVGIIRQTNSTILSGLYYTSLAGDLLGFKNVSDGVVYSVTPCDVSAQAAVIDGAIVGAMTSINSELLGLTHWTTTPNFYYYSIYNYTNERTRGTAIDSNDVDCEPIITYSNIGVCKNGALVFINVTHSDGDVQPISTGNVTIPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQTIEQALAMSARLENMEVDSMLFVSENALKLASVEAFNSTEHLDPIYKEWPNIGGSWLGGLKDILPSHNSKRKYRSAIEDLLFDKVVTSGLGTVDEDYKRCTGGYDIADLVCAQYYNGIMVLPGVANDDKMTMYTASLAGGITLGALGGGAVAIPFAVAVQARLNYVALQTDVLNKNQQILANAFNQAIGNITQAFGKVNDAIHQTSQGLATVAKALAKVQDVVNTQGQALSHLTVQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMIFFHTVLLPTAYETVTAWSGICASDGDRTFGLVVKDVQLTLFRNLDDKFYLTPRTMYQPRAATSSDFVQIEGCDVLFVNATVIDLPSIIPDYIDINQTVQDILENYRPNWTVPELTLDIFNATYLNLTGEIDDLEFRSEKLHNTTVELAILIDNINNTLVNLEWLNRIETYVKWPWYVWLLIGLVVVFCIPLLLFCCCSTGCCGCIGCLGSCCHSLCSRRQFENYEPIEKVHVH |
Nucleotide
| Nucleotide_Id: MT114539.1 |
Length: 4362bp |
| Description: Canine coronavirus strain B600_ZJ_2019; partial genome |
Source: Canine coronavirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 6-May-20 |
| Class virus: Coronaviridae |
Virus name: Canine coronavirus |
| CDS: MT114539.1:20184..24545 |
Host: canine |
| Authors: He;H.J.; Zhang;W.; Liang;J.; Lu;M.; Wang;R.; Li;G.; He;J.W.; Chen;J.; Xing;G. and Chen;Y. |
Journal: Microb Pathog (2020) In press |
| Title: Etiology and genetic evolution of canine coronavirus circulating in five provinces of China; during 2018-2019 |
db_xref: taxon:11153 |
| Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(29056); strand=1); type='source'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(136); ExactPosition(12157); strand=1); FeatureLocation(ExactPosition(12156); ExactPosition(20187); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(136); ExactPosition(12187); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(20183); ExactPosition(24545); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24608); ExactPosition(24845); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24789); ExactPosition(25005); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25001); ExactPosition(25736); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25722); ExactPosition(25971); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25900); ExactPosition(26773); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26785); ExactPosition(27934); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27938); ExactPosition(28244); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28248); ExactPosition(28890); strand=1); type='CDS') |
| Sequence: ATGATTGTTCTAACATTGTTCATTCTTTTGGTCTCACACACCAATGTTTATTGTACAACAAATTCTGACTGTGTACAAGTCAATGTTACACAATTACCAGGCAATGAGAACATTATTAAAGACTTTCTGTTTAACAATTTTAAAGAAGAAGGAACTGTAGTTGTTGGTGGTTATTACCCTACAGAGGTGTGGTATAACTGTTCTCGAACTGCAACCACTACTGCCTACGAGTACTTCAGTAACATACATGCTTTCTATTTTGATATGGAAGCCATGGAAAATAGTACTGGTAATGCAAGGGGTAAACCTTTATTATTCCATGTGCATGGTGAGCCTGTTAGTGTTATCATATATATATCAGCTTATAGAGACGATGTGCAACATAGGCCACTTTTAAAACATGGATTAGTGTGCATAACTGAAAGTCGCAATATTGATTATAACAGTTTCACTAGCCGGCAGTGGAATTCCATATGTACTGGTAATGACAGAAAAATTCCTTTCTCTGTCATACCTACGGATAATGGAACAAAAATCTATGGTCTCGAGTGGAATGATGAATCTGTTACAGCTTACATTAGTGGTCGTTCTCACAACCTGAACATCAATACTAATTGGTTTAACAATGTCACACTTTTGTATTCGCGCTCCAGCACTGCAACATGGCAAAAGAGTTCTGCATACGTCTACCAAGGTGTTTCTAACTTCACTTATTACAAGTTAAATAACACCAATGGTCTAAAAATTTATGAATTATGTGAAAATTACGAATATTGCACTGGCTACGCCACTAACGTCTTTGCCCCAACTGTGGGAGGTTATATACCTGACGGATTCAGTTTTAACAATTGGTTTTTACTTACAAATAGCTCCACTTTTGTTAGTGGCAGATTTGTAACAAATCAACCTCTGTTAGTTAATTGCTTGTGGCCAGTGCCTAGTTTTGGTGTTGCAGCGCAAGAATTTTGTTTTGAAGGTGCCAAGTTTAGCCAATGCAATGGTGTGTCTTTAAATAACACAGTGGATGTTATTAGATTCAACCTTAATTTTACTGCAGATGTACAATCTGGCATGGGTGCTACAGTATTTTCACTGAACACAGCAGGTGGTGTCATTCTTGAGATTTCTTGTTATAATGATACAGTGAGTGAGTCAAGTTTCTACAGTTATGGTGAAATTCCATTCGGCGTAACTGATGGACCGCGTTACTGTTATGTGCTCTATAATGGCACGGCTCTTAAGTACTTAGGAACATTACCACCTAGTGTCAAGGAAATTGCTATTAGTAAGTGGGGCCATTTTTATATTAATGGTTACAATTTCTTTAGCACTTTTCCTATTGATTGTATATCTTTCAACTTAACCACTGGTGCTAGTGGAGCTTTCTGGACAATTGCCTACACATCATACACTGAAGCGTTAGTACAAGTTGAAAACACAGCTATTAAGAAGGTGACGTATTGTAACAGTCACATTAATAACATCAAATGTTCTCAACTCACTGCTAATTTGCAAAATGGATTTTATCCTGTTGCTTCAAGTGAAGTTGGTCTTGTTAATAAGAGTGTTGTGTTACTACCAAGTTTTTATTCACATACCAGTGTTAATATAACTATTGACCTTGGTATGAAGCGTAGTGGTTATGGTCAACCCATAGCTTCAACATTAAGTAACATCACATTACCAATGCAGGATAATAATACTGATGTGTACTGTATTCGTTCTAACCAATTTTCAGTTTACACCCATTCCACTTGCAAAAGTTCTTTGTGGGACAACAATTTTAATCAAGATTGCACAGATGTTTTATATGCCACGGCTGTTATAAAAACTGGTACTTGTCCTTTCTCATTTGATAAGTTGAACAATTACTTAACTTTTAACAAGTTCTGTTTGTCGTTGAATCCTACTGGTGCCAACTGTAAGTTTGATGTTGCTGCCCGTACAAGAACCAATGAGCAGGTTGTTAGAAGTTTATATGTAATATATGAAGAAGGAGATAACATAGTTGGTGTACCGTCTGATAATAGTGGTCTTCATGATCTGTCAGTGTTACACTTAGACTCCTGTACAGATTACAATATATATGGTAGAACTGGTGTTGGTATTATCAGACAAACTAACAGCACAATACTTAGTGGTTTATATTACACATCACTAGCAGGTGATTTATTAGGTTTTAAAAATGTTAGTGATGGTGTTGTCTATTCTGTGACACCATGTGATGTAAGTGCACAAGCGGCTGTTATTGATGGTGCCATAGTTGGAGCTATGACTTCCATTAATAGTGAACTGTTAGGTCTTACACATTGGACAACAACACCTAATTTTTATTATTATTCCATATATAATTACACAAATGAGAGAACTCGTGGCACTGCAATTGACAGTAATGATGTTGATTGTGAACCTATCATAACCTATTCCAACATAGGTGTTTGTAAAAATGGTGCTTTGGTCTTTATTAACGTCACACACTCTGATGGTGACGTTCAACCAATTAGCACTGGTAATGTCACGATACCAACAAACTTTACCATATCTGTGCAAGTCGAATACATCCAGGTTTACACTACACCAGTGTCAATAGATTGTTCTAGATATGTTTGTAATGGTAACCCTAGATGTAATAAATTGTTAACACAATATGTTTCTGCATGTCAAACTATTGAGCAAGCGCTTGCAATGAGTGCCAGACTCGAAAACATGGAAGTTGATTCCATGTTGTTTGTTTCAGAAAATGCCCTTAAATTGGCATCTGTTGAGGCGTTCAATAGTACAGAACATTTAGATCCTATTTACAAAGAATGGCCTAACATAGGTGGTTCTTGGCTAGGAGGTCTAAAAGACATACTTCCGTCCCATAATAGCAAGCGTAAATACCGCTCTGCTATAGAAGACTTGCTTTTTGATAAAGTTGTAACTTCTGGTCTGGGTACAGTTGATGAAGATTACAAACGTTGTACAGGTGGTTATGACATAGCTGACTTAGTTTGTGCACAATATTATAATGGCATCATGGTTCTACCTGGTGTGGCTAATGATGACAAGATGACTATGTATACAGCCTCTCTTGCAGGTGGTATAACATTAGGTGCACTAGGTGGTGGTGCCGTGGCTATACCTTTTGCAGTTGCAGTTCAGGCTAGACTTAATTATGTTGCTTTACAAACTGATGTATTGAATAAAAACCAGCAGATCCTGGCTAATGCTTTCAACCAAGCTATTGGTAACATTACACAGGCATTTGGTAAGGTTAATGATGCTATACATCAGACGTCACAAGGTCTTGCCACTGTTGCTAAAGCATTGGCAAAAGTGCAAGATGTTGTTAACACACAAGGTCAAGCTTTAAGCCACCTAACTGTGCAATTGCAAAATAATTTCCAAGCCATTAGTAGTTCTATCAGTGACATTTATAATAGGCTTGATGAACTTAGTGCTGATGCACAAGTTGATAGGCTGATTACAGGTAGACTTACAGCACTTAATGCATTTGTGTCTCAGACTCTAACCAGACAAGCTGAGGTTAGGGCTAGTAGACAACTTGCCAAAGACAAGGTTAATGAATGTGTTAGGTCTCAGTCTCAGAGATTTGGATTCTGTGGTAATGGTACACATTTGTTTTCACTTGCAAATGCAGCACCAAATGGCATGATTTTCTTTCACACAGTGCTATTACCAACAGCTTATGAAACTGTAACAGCTTGGTCAGGTATTTGTGCTTCAGATGGCGATCGCACTTTTGGACTTGTCGTTAAAGATGTTCAGTTGACGTTGTTTCGTAATCTAGATGACAAGTTCTATTTGACTCCCAGAACTATGTATCAGCCTAGAGCTGCAACTAGTTCAGATTTTGTTCAAATTGAGGGGTGTGATGTGTTGTTTGTTAACGCTACTGTAATTGATTTGCCTAGTATTATACCTGACTATATCGACATTAATCAGACTGTTCAAGACATATTAGAAAACTACAGACCAAACTGGACTGTACCTGAATTGACACTTGACATTTTTAACGCAACCTATTTAAATCTGACTGGTGAAATTGATGACTTAGAATTTAGGTCAGAAAAGCTACATAATACTACTGTAGAACTTGCCATTCTCATTGACAATATCAACAATACATTAGTCAATCTTGAATGGCTCAATAGAATTGAAACCTATGTGAAATGGCCATGGTATGTGTGGCTACTAATAGGCTTAGTAGTAGTATTTTGCATACCGCTATTGCTATTTTGCTGTTGTAGTACAGGTTGCTGTGGATGCATAGGTTGTTTAGGAAGTTGTTGTCATTCTCTTTGTAGTAGAAGACAATTTGAAAATTACGAACCAATTGAAAAAGTGCATGTCCACTAA |