| Protein Id: QJI07150.1 |
Length: 1453 aa |
| Description: spike protein Canine coronavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 6-May-20 |
| Source: Canine coronavirus |
| Class virus: Coronaviridae |
Virus name: Canine coronavirus |
| Host: canine |
Authors: He;H.J.; Zhang;W.; Liang;J.; Lu;M.; Wang;R.; Li;G.; He;J.W.; Chen;J.; Xing;G. and Chen;Y. |
| Title: Etiology and genetic evolution of canine coronavirus circulating in five provinces of China; during 2018-2019 |
Journal: Microb Pathog (2020) In press |
| Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| Sequence: MIVLTLFTLLVSYTNVYCTTNSDCVQVNVTQLPGNENIIKDFLFNNFKEEGTVVVGGYYPTEVWYNCSRTATTTAYEYFSNIHAFYFDMEAMENSTGNARGKPLLFHVHGEPFSVIIYISAYRDDVQQRPLLKHGLLCITESRNIDYNRFTSGQWNSICTGNDRKIPFSVIPTDNGTKIYGLEWNDESVTAYISGRSHNLNINTNWFNNVTLLYSRSSTATWQKSAAYVYQGVSNFTYYKLNNTNGLKTYELCENYEYCTGYATNVFAPTVGGYIPDGFSFNNWFLLTNSSTFVSGRFVTNQPLLVNCLWPVPSFGVAAQEFCFEGAKFSQCNGVSLNNTVDVIRFNLNFTADVQSGMGATVFSLNTAGGVILEISCYNDTVSESSFYSYGEIPFGVTDGPRYCYVLYNGTALKYLGTLPPSVKEIAISKWGHFYINGYNFFSTFPIDCISFNLTTGASGAFWTIAYTSYTEALVQVENTAIKKVTYCNSHINNIKCSQLTANLQNGFYPVASSEVGLVNKSVVLLPSFYSHTAVNITIDLGMKRSGYGQPIASTLSNITLPMQDNNTDVYCIRSNQFSVYTHSTCKSSLWDNNFNQDCTDVLYATAVIKTGTCPFSFDKLNNYLTFNKFCLSLNPTGANCKFDVAARTRTNEQVVRSLYVIYEEGDNIVGVPSDNSGLHDLSVLHLDSCTDYNIYGRTGVGIIRQTNSTILSGLYYTSLAGDLLGFKNVSDGVVYSVTPCDVSAQAAVIDGAIVGAMTSINSELLGLTHWTTTPNFYYYSIYNYTNERTRGTAIDSNDVDCEPIITYSNIGVCKNGALVFINVTHSDGDVQPISTGNVTIPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQTIEQALAMSARLENMEVDSMLFVSENALKLASVEAFNSTEHLDPIYKEWPNIGGSWLGGLKDILPSHNSKRKYRSAIEDLLFDKVVTSGLGTVDEDYKRCTGGYDIADLVCAQYYNGIMVLPGVANDDKMTMYTASLAGGITLGALGGGAVAIPFAVAVQARLNYVALQTDVLNKNQQILANAFNQAIGNITQAFGKVNDAIHQTSQGLATVAKALAKVQDVVNTQGQALSHLTVQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRSQSQRFGFCGNGTHLFSLANAAPNGMVFFHSVLLPTAYETVTAWSGICASDGDRTFGLVVKDVQLTLFRNLDDKFYLTPRTMYQPRAATSSDFVQIEGCDVLFVNATVIDLPSIIPDYIDINQTVQDILENYRPNWTAPELTLDIFNATYLNLTGEIDDLEFRSEKLHNTTVELAILIDNINNTLVNLEWLNRIETYVKWPWYVWLLIGLVVVFCIPLLLFCCCSTGCCGCFGCLGSCCNSICSRRQFESYEPIEKVHVH |
Nucleotide
| Nucleotide_Id: MT114543.1 |
Length: 4362bp |
| Description: Canine coronavirus strain B194_GZ_2019; partial genome |
Source: Canine coronavirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 6-May-20 |
| Class virus: Coronaviridae |
Virus name: Canine coronavirus |
| CDS: MT114543.1:20244..24605 |
Host: canine |
| Authors: He;H.J.; Zhang;W.; Liang;J.; Lu;M.; Wang;R.; Li;G.; He;J.W.; Chen;J.; Xing;G. and Chen;Y. |
Journal: Microb Pathog (2020) In press |
| Title: Etiology and genetic evolution of canine coronavirus circulating in five provinces of China; during 2018-2019 |
db_xref: taxon:11153 |
| Taxonomy: Canine coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(29148); strand=1); type='source'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(196); ExactPosition(12217); strand=1); FeatureLocation(ExactPosition(12216); ExactPosition(20247); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(196); ExactPosition(12247); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(20243); ExactPosition(24605); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24668); ExactPosition(24905); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24849); ExactPosition(25065); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25061); ExactPosition(25796); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25782); ExactPosition(26031); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25960); ExactPosition(26833); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26845); ExactPosition(27994); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27998); ExactPosition(28304); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28308); ExactPosition(28950); strand=1); type='CDS') |
| Sequence: ATGATTGTTCTAACATTGTTCACCCTTTTGGTCTCATACACCAATGTTTATTGTACAACAAATTCTGATTGTGTACAAGTCAATGTTACACAATTACCAGGCAATGAGAACATTATTAAAGACTTTCTGTTTAACAATTTTAAAGAAGAAGGAACTGTAGTTGTTGGTGGTTATTACCCTACAGAGGTGTGGTATAACTGTTCTCGAACTGCAACCACTACTGCCTACGAGTATTTCAGTAACATACATGCTTTCTATTTTGATATGGAAGCCATGGAAAATAGTACTGGTAATGCAAGGGGTAAACCTTTATTATTCCATGTGCATGGTGAGCCGTTTAGTGTCATCATATATATATCAGCTTATAGGGATGATGTGCAACAGAGGCCACTTTTAAAACATGGATTGTTGTGCATAACTGAAAGTCGCAATATTGACTATAACAGGTTCACCAGCGGTCAGTGGAATTCCATATGTACTGGTAATGACAGAAAAATTCCTTTCTCTGTCATACCTACGGATAATGGAACAAAAATCTATGGTCTTGAGTGGAATGATGAATCTGTTACAGCTTACATTAGTGGTCGTTCTCACAACCTGAACATCAATACTAATTGGTTTAACAATGTCACACTTTTGTATTCGCGCTCCAGCACTGCAACATGGCAAAAGAGTGCTGCATACGTCTACCAAGGTGTTTCTAACTTCACTTATTACAAGTTAAATAACACCAATGGTCTAAAAACTTATGAATTATGTGAAAATTATGAATATTGCACTGGCTACGCCACTAACGTCTTTGCCCCAACTGTGGGAGGTTATATACCTGACGGATTCAGTTTTAACAATTGGTTTTTACTTACAAATAGCTCCACTTTTGTTAGTGGCAGATTTGTAACAAATCAACCTCTGTTAGTTAATTGCTTGTGGCCAGTGCCTAGTTTTGGTGTTGCAGCGCAAGAATTTTGTTTTGAAGGTGCCAAGTTTAGCCAATGTAATGGTGTGTCTTTAAATAACACAGTGGATGTTATTAGATTCAACCTTAATTTTACTGCAGATGTACAATCTGGCATGGGTGCTACAGTATTTTCACTGAATACAGCAGGTGGTGTCATTCTTGAGATTTCTTGTTATAATGATACAGTGAGTGAGTCAAGTTTCTACAGTTATGGTGAAATTCCATTCGGCGTAACTGATGGACCTCGTTACTGTTATGTGCTCTATAATGGCACGGCTCTTAAGTACTTAGGAACGCTACCACCTAGTGTCAAGGAAATTGCTATTAGTAAGTGGGGCCATTTTTATATTAATGGTTACAATTTCTTTAGCACTTTTCCTATTGATTGTATATCTTTTAACTTAACCACTGGTGCTAGTGGAGCTTTTTGGACAATTGCCTACACATCATACACTGAAGCGTTAGTACAAGTTGAAAACACAGCTATTAAGAAGGTGACTTATTGTAACAGTCACATTAATAACATCAAATGTTCTCAACTCACTGCTAATTTGCAAAATGGATTTTATCCTGTAGCTTCAAGTGAAGTTGGTCTTGTCAATAAGAGTGTTGTGTTACTACCAAGTTTTTATTCACATACCGCTGTCAATATAACTATTGACCTTGGTATGAAGCGTAGTGGTTATGGTCAACCCATAGCTTCAACATTAAGTAACATCACACTACCAATGCAGGATAACAACACTGATGTGTATTGTATTCGTTCCAACCAATTTTCAGTTTACACCCATTCCACTTGCAAAAGTTCTTTGTGGGACAACAATTTTAATCAAGATTGCACAGATGTTTTATATGCCACAGCTGTTATAAAAACTGGTACTTGTCCTTTCTCATTTGATAAGTTGAACAATTACTTAACTTTTAACAAGTTCTGTTTGTCGTTGAATCCTACTGGTGCCAACTGTAAGTTTGATGTTGCTGCCCGTACTCGAACCAACGAGCAGGTTGTTAGAAGTTTATATGTAATATATGAAGAAGGAGATAACATAGTTGGTGTACCGTCTGATAATAGTGGTCTTCATGATCTGTCAGTGTTACACTTAGACTCCTGTACAGATTACAATATATATGGTAGAACTGGTGTTGGTATTATTAGACAAACTAACAGCACAATACTTAGCGGCTTATATTACACCTCACTAGCGGGTGATTTGTTAGGTTTTAAAAATGTTAGTGATGGTGTTGTCTATTCTGTGACACCATGTGATGTAAGTGCACAAGCGGCTGTTATTGATGGTGCCATAGTTGGAGCTATGACTTCCATTAATAGTGAACTGTTAGGTCTAACACATTGGACAACAACACCTAATTTTTATTACTATTCCATATATAATTACACAAATGAGAGAACTCGTGGCACTGCAATTGACAGTAATGATGTTGATTGTGAACCTATAATAACCTATTCCAACATAGGTGTTTGTAAAAATGGTGCTTTGGTCTTTATTAACGTTACCCACTCTGATGGTGACGTTCAACCAATTAGCACTGGTAATGTCACGATACCAACAAACTTTACCATATCTGTGCAAGTCGAATACATCCAGGTTTACACTACACCAGTGTCAATAGATTGTTCTAGATATGTTTGTAATGGTAACCCTAGATGTAATAAATTGTTAACACAATATGTTTCTGCATGTCAAACTATTGAGCAAGCGCTTGCAATGAGTGCCAGACTCGAAAACATGGAAGTTGATTCCATGTTGTTTGTTTCAGAAAATGCCCTTAAATTGGCATCTGTTGAGGCGTTCAATAGTACAGAACATTTAGATCCTATTTACAAAGAATGGCCTAACATAGGTGGTTCTTGGCTAGGAGGTCTAAAAGACATACTTCCGTCCCATAATAGCAAGCGTAAATATCGTTCTGCTATAGAGGACTTGCTTTTTGACAAAGTTGTAACTTCTGGTCTGGGTACAGTTGATGAAGATTACAAACGTTGTACAGGTGGTTACGACATAGCTGACTTAGTTTGTGCACAATATTATAATGGCATCATGGTTCTACCTGGTGTGGCTAATGATGACAAGATGACTATGTACACAGCTTCTCTTGCAGGTGGTATAACATTAGGTGCACTAGGTGGTGGTGCCGTGGCTATACCTTTTGCAGTAGCAGTTCAGGCTAGACTTAATTATGTTGCTTTACAAACTGATGTATTGAATAAAAACCAGCAGATCCTGGCTAATGCTTTCAACCAAGCCATTGGTAACATTACACAGGCATTTGGTAAGGTTAATGATGCTATACATCAGACATCACAAGGACTTGCCACTGTTGCTAAAGCATTGGCAAAAGTGCAAGATGTTGTTAACACACAAGGCCAAGCTTTAAGCCACCTGACTGTGCAATTGCAAAATAATTTCCAAGCCATTAGTAGTTCTATCAGTGATATTTATAACAGGCTTGATGAACTGAGTGCTGATGCACAAGTTGATAGGCTGATTACAGGTAGACTTACAGCACTTAATGCATTCGTGTCTCAGACTCTAACCAGACAAGCTGAGGTTAGGGCTAGTAGACAACTTGCTAAAGACAAGGTTAATGAATGTGTTAGGTCTCAGTCTCAGAGATTTGGATTCTGTGGTAATGGTACACATTTGTTTTCACTTGCAAATGCAGCACCAAATGGCATGGTTTTCTTTCACTCAGTGCTATTACCAACAGCTTATGAAACCGTAACAGCTTGGTCAGGTATTTGTGCTTCAGATGGCGATCGCACTTTTGGACTTGTCGTTAAAGATGTTCAGTTGACGTTGTTTCGTAATCTAGATGACAAGTTCTATTTGACTCCCAGAACTATGTATCAGCCTAGAGCTGCAACTAGTTCAGATTTTGTTCAAATAGAGGGGTGTGATGTGTTGTTTGTCAATGCTACTGTAATTGACTTGCCTAGTATTATACCTGACTATATCGACATTAATCAGACTGTTCAAGACATATTAGAAAACTACAGACCAAACTGGACTGCACCTGAATTGACACTTGACATTTTTAACGCAACCTATTTAAATCTGACTGGTGAAATTGATGATTTAGAATTTAGGTCAGAAAAGTTACATAATACTACTGTAGAACTTGCCATTCTCATTGATAATATTAACAATACATTAGTCAATCTTGAATGGCTCAATAGAATTGAGACTTATGTGAAATGGCCCTGGTATGTGTGGCTACTAATAGGCTTAGTAGTAGTATTTTGCATACCACTGTTGCTATTTTGCTGCTGTAGTACTGGTTGTTGTGGGTGCTTTGGGTGTCTAGGAAGTTGTTGCAACTCCATATGTAGTAGAAGACAATTTGAAAGTTATGAACCAATTGAAAAAGTGCATGTCCACTAA |