| Protein Id: YP_009825008.1 |
Length: 1191 aa |
| Description: spike protein Duck coronavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 15-May-20 |
| Source: Duck coronavirus |
| Class virus: Coronaviridae |
Virus name: Duck coronavirus |
| Host: duck |
Authors: Zhuang;Q.Y.; Wang;K.C.; Liu;S.; Hou;G.Y.; Jiang;W.M.; Wang;S.C.; Li;J.P.; Yu;J.M. and Chen;J.M. |
| Title: Genomic Analysis and Surveillance of the Coronavirus Dominant in Ducks in China |
Journal: PLoS ONE 10 (6); E0129256 (2015) |
| Taxonomy: Duck coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| db_xref: """taxon:300188, GeneID:55060248""" |
| Sequence: MLATLVLLTTVLCVANPCLTFNGTSHGVHDGNFTARVCDGPAGYYSSSPIRPSDGVYSVNGFYKPVYTCCIRHTYPKNTTQCANKKVSVLYYINDTTEAFSITIPRAVVIKPDTESFILSLGDFLLTAKQLLVYGTIQSLMFLRNGTWYINGVPALPVSYTFNTTLNVTHTSCYESIGAQTFYFTSLILSNGLVEFSAGNLLRSVACEDNTIINSMQCSHQRFNFSTGLHSYDSVVPVSGNVTYIPYPGVGDNSSLELYSLNVSLRSKGNYGVHYNYTCVNASLYTYFRVYCQDEHDWNTEKLCTVSDYYVPGRHLYGSQHQYVGIVPHYTTCSSLGLSLSNINNNLGFDTFCITNARSTYNIAEVTQFQCLFVIDVMVFDATGGSSWGQPIEYFYVGLDFSFGNRMYGVLQIPPQVIYEDQCHSYDIYGIKGTGHIYNVTGYDNYTLSTGGLAISGGNGLLAFRNNGSLYTVKPCSTVSTQAVIVANQLAGLYLPLSCDIVFNLNLGNETTPVDGGCLVFNSTFKNRQSQLYGSECYGVFATIGSSCIYANSSVLNRTLPRAGVDTTVEPLLDVTANVSIPYTLTLAVTTEYLQTSYQKVTIDCARYVCGESLKCRTLLQQYGSFCTSVNNILAGVNDNEDNGMLSFVEAINTGYSLNFSSFNSSNLGGFNLSLVLPNSAKPSGRSFIEDLLFDKVVTVGVGEVDANYDKCMDSRGGKFTNAADLTCAQFYNGIMVLPGVVDPDLMTLYTGSLLGGMSFGGLSSAASIPFATQVQARINYLALTQSVLLDNQNLIANSFNNALEKIQSALDVVSAGFQEVAKGFETVSVALSKVQDVVNSHSEILNKLMAQLNVNFGAISSSLSDIYSQLDELNANAQVDRLITGRLTALSTYAASLQLAAYKAEESRKLALQKVEECVKSQSMRYGFCGNGSHVLTIPQTAPNGMFFIHYTYPPASYITVEAVPGLCVTTRTGSYGVMPKTGSGIIFRANGTFFVTARTLYQPKLLSYSDVVNLTSCEANYYNVSQDETPFQPELPSFDDEFDNIYTELNTSKDLIDSIYKDFNYTIPILNLEDDICRLNSSINALWNYSSIIDEINAALNDTYINLEQLNKVTRYIKWPWYVWLAIGFACLIFVLILCWIFFMTGCCGCCCGCFGIIPLMYKCSKKSSYYTTFDDDVVGEQIRPKKFV |
Nucleotide
| Nucleotide_Id: NC_048214.1 |
Length: 3576bp |
| Description: Duck coronavirus isolate DK/GD/27/2014; complete genome |
Source: Duck coronavirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 15-May-20 |
| Class virus: Coronaviridae |
Virus name: Duck coronavirus |
| CDS: NC_048214.1:20318..23893 |
Host: duck |
| Authors: Zhuang;Q.Y.; Wang;K.C.; Liu;S.; Hou;G.Y.; Jiang;W.M.; Wang;S.C.; Li;J.P.; Yu;J.M. and Chen;J.M. |
Journal: PLoS ONE 10 (6); E0129256 (2015) |
| Title: Genomic Analysis and Surveillance of the Coronavirus Dominant in Ducks in China |
db_xref: taxon:300188; GeneID:55060258; GeneID:55060258; GeneID:55060247; GeneID:55060247; GeneID:55060248; GeneID:55060248; GeneID:55060249; GeneID:55060249; GeneID:55060250; GeneID:55060250; GeneID:55060251; GeneID:55060251; GeneID:55060252; GeneID:55060252; GeneID:55060253; GeneID:55060253; GeneID:55060254; GeneID:55060254; GeneID:55060255; GeneID:55060255; GeneID:55060256; GeneID:55060256; GeneID:55060257; GeneID:55060257 |
| Taxonomy: Duck coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(27754); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(346); ExactPosition(20364); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(346); ExactPosition(12262); strand=1); FeatureLocation(ExactPosition(12261); ExactPosition(20364); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(12220); ExactPosition(12262); strand=1); FeatureLocation(ExactPosition(12261); ExactPosition(15081); strand=1); 'join'); type='mat_peptide'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(15081); ExactPosition(16881); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(16881); ExactPosition(18447); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(18447); ExactPosition(19461); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(19461); ExactPosition(20292); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(346); ExactPosition(12292); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(346); ExactPosition(12292); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(346); ExactPosition(2356); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(2356); ExactPosition(7225); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(7225); ExactPosition(8770); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(8770); ExactPosition(9691); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(9691); ExactPosition(10573); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(10573); ExactPosition(10822); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(10822); ExactPosition(11452); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(11452); ExactPosition(11785); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(11785); ExactPosition(12220); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(12220); ExactPosition(12286); strand=1); type='mat_peptide'); SeqFeature(FeatureLocation(ExactPosition(20317); ExactPosition(23893); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20317); ExactPosition(23893); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(23892); ExactPosition(24066); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(23892); ExactPosition(24066); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24065); ExactPosition(24257); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24065); ExactPosition(24257); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24237); ExactPosition(24519); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24237); ExactPosition(24519); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24515); ExactPosition(25223); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24515); ExactPosition(25223); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25223); ExactPosition(25508); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25223); ExactPosition(25508); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25586); ExactPosition(25784); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25586); ExactPosition(25784); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25780); ExactPosition(26029); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25780); ExactPosition(26029); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25971); ExactPosition(27216); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25971); ExactPosition(27216); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27245); ExactPosition(27458); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(27245); ExactPosition(27458); strand=1); type='CDS') |
| Sequence: ATGTTGGCAACGTTAGTTTTGTTGACGACAGTTTTGTGTGTTGCTAATCCATGTTTAACTTTTAATGGTACTTCTCATGGTGTACATGATGGTAATTTCACTGCACGTGTTTGTGATGGGCCTGCTGGTTATTATTCTTCATCACCAATTCGTCCATCTGACGGTGTCTATAGTGTTAACGGTTTTTATAAACCCGTTTATACATGTTGTATAAGGCATACCTATCCGAAAAATACGACGCAGTGTGCGAATAAAAAAGTTTCTGTTTTGTATTATATTAACGACACAACAGAGGCTTTTTCCATTACCATACCCAGAGCCGTTGTTATTAAACCGGACACAGAATCTTTCATTTTGTCGCTGGGTGATTTTTTACTCACAGCTAAACAGCTGTTAGTTTATGGCACTATTCAGTCTCTTATGTTTTTGCGTAATGGTACTTGGTATATTAACGGTGTTCCGGCTCTTCCTGTCAGTTACACCTTTAATACCACTTTAAATGTCACTCATACTAGCTGTTATGAGAGTATTGGTGCACAAACTTTTTATTTTACTTCACTAATCCTTTCTAATGGGTTAGTTGAATTTTCTGCTGGCAACCTTCTTCGGTCTGTTGCTTGTGAAGACAACACTATTATAAACTCTATGCAATGTAGTCACCAGCGATTTAATTTTTCGACTGGTTTGCATTCTTATGACAGTGTTGTTCCTGTTTCTGGTAATGTCACCTACATTCCTTACCCTGGTGTCGGGGACAATTCGAGTTTGGAGTTGTACAGTCTTAATGTTTCGCTTCGTTCTAAAGGTAACTATGGCGTTCATTATAACTATACTTGTGTTAATGCTTCTCTGTACACCTATTTTCGTGTTTATTGTCAGGATGAACATGATTGGAATACAGAAAAGCTATGTACTGTGTCTGACTATTATGTGCCTGGTAGACATTTGTATGGCAGCCAACATCAATATGTTGGCATTGTCCCTCATTATACTACCTGTTCTTCGTTAGGGCTTAGCCTTAGTAATATTAATAATAATTTGGGTTTTGATACTTTTTGTATTACTAATGCTAGGTCTACTTATAATATAGCAGAAGTCACCCAGTTTCAATGTCTTTTTGTGATTGATGTTATGGTTTTTGATGCTACAGGTGGTAGTAGTTGGGGTCAACCTATTGAATATTTTTATGTTGGCCTCGATTTTTCTTTTGGTAATAGAATGTATGGTGTCTTGCAAATTCCTCCGCAAGTTATATATGAAGACCAGTGTCATTCTTATGATATTTATGGTATTAAAGGCACTGGTCACATCTATAATGTCACTGGTTATGACAATTACACCTTATCTACAGGTGGTTTGGCTATATCAGGTGGTAATGGTCTATTGGCCTTTCGTAATAATGGTTCTTTGTATACTGTCAAACCGTGTTCTACAGTATCTACTCAGGCTGTTATTGTAGCTAACCAGTTGGCAGGGTTGTATTTACCGCTCTCATGTGACATAGTTTTTAATCTTAATCTTGGTAATGAAACTACTCCTGTTGATGGCGGCTGTTTAGTTTTTAATTCAACTTTTAAGAACCGACAATCACAGCTTTATGGCAGTGAGTGTTATGGTGTATTTGCCACTATTGGTTCTTCGTGTATTTATGCTAATTCTTCTGTGTTAAATCGTACACTGCCGAGGGCAGGCGTAGATACCACTGTAGAACCATTATTGGATGTGACGGCCAATGTTTCCATACCCTATACCCTGACACTGGCGGTCACTACTGAATACTTACAAACATCTTACCAGAAAGTCACTATTGACTGTGCCCGGTATGTGTGTGGTGAGTCTCTTAAATGTCGTACTCTTTTGCAGCAGTATGGCAGTTTTTGTACCAGCGTTAATAATATATTAGCTGGTGTTAACGATAATGAGGATAACGGCATGCTTTCTTTTGTGGAGGCTATTAATACTGGTTATTCTCTTAACTTTTCTAGTTTTAACAGTTCAAACCTTGGTGGGTTTAATCTGTCGTTAGTCTTACCTAATTCAGCAAAGCCCTCGGGACGTTCCTTTATTGAAGATTTACTCTTTGATAAAGTGGTTACTGTCGGTGTGGGTGAAGTTGATGCTAATTATGATAAGTGCATGGATTCAAGAGGCGGCAAGTTTACTAATGCTGCTGACTTGACATGTGCTCAGTTTTATAATGGTATCATGGTGCTTCCTGGAGTGGTGGACCCAGACCTTATGACACTTTATACAGGCTCACTTCTGGGTGGCATGTCTTTTGGTGGTCTTTCTTCTGCTGCCTCTATACCTTTTGCCACACAGGTGCAGGCCCGTATTAATTATTTGGCACTTACTCAGTCTGTGCTTTTGGATAATCAAAACCTTATTGCTAATTCATTTAATAATGCTCTTGAAAAAATACAGTCAGCACTTGATGTGGTGTCAGCTGGTTTTCAAGAGGTTGCAAAAGGCTTTGAGACTGTTTCTGTAGCACTTTCTAAGGTTCAGGATGTTGTTAATTCACATTCTGAGATTTTGAATAAACTTATGGCGCAGCTTAATGTTAATTTTGGCGCCATCTCTTCTTCTTTGTCTGATATCTATTCTCAACTTGACGAGCTTAATGCTAACGCTCAAGTTGATAGATTGATAACAGGTAGGTTGACAGCACTCTCTACATATGCAGCTTCTTTACAGTTGGCTGCATATAAAGCAGAAGAGTCGCGTAAATTGGCTTTGCAGAAAGTTGAAGAATGTGTTAAATCACAGTCTATGCGTTATGGGTTTTGTGGTAATGGCAGTCATGTTTTAACCATACCACAAACAGCACCTAATGGTATGTTTTTTATACACTATACCTATCCCCCTGCCTCATATATAACTGTTGAGGCGGTACCAGGGTTGTGTGTTACCACACGTACTGGTTCTTATGGTGTTATGCCTAAAACTGGTAGTGGTATTATATTTAGGGCTAACGGCACGTTCTTTGTAACTGCCCGTACTCTTTATCAGCCCAAATTGCTTTCTTATTCAGACGTCGTTAATTTAACGTCGTGTGAAGCTAATTATTATAATGTTAGCCAAGATGAAACACCGTTTCAGCCTGAGCTACCTAGTTTTGATGATGAGTTCGATAATATATATACCGAACTCAACACTTCTAAAGACCTCATAGACTCAATCTATAAGGATTTTAATTATACCATCCCTATTCTTAATTTAGAGGATGATATATGTAGGTTGAACTCTTCTATTAATGCGCTGTGGAATTACAGCTCTATTATAGATGAGATCAATGCTGCGCTCAATGACACTTACATTAACCTGGAACAACTTAATAAGGTTACCAGGTACATTAAGTGGCCTTGGTACGTTTGGCTTGCTATAGGTTTTGCATGCCTTATTTTTGTGTTAATCCTATGCTGGATTTTCTTTATGACTGGTTGTTGCGGATGTTGCTGTGGTTGTTTTGGTATAATACCTCTTATGTACAAGTGCAGCAAAAAATCTTCGTATTACACCACCTTTGATGATGATGTCGTAGGTGAACAAATCAGACCTAAAAAGTTTGTTTAA |