| Protein Id: AAS00080.1 |
Length: 1169 aa |
| Description: spike glycoprotein Infectious bronchitis virus. |
Molecule type: linear |
| Data category: VRL |
Date: 6-Apr-07 |
| Source: Infectious bronchitis virus |
| Class virus: Coronaviridae |
Virus name: Infectious bronchitis virus |
| Host: -- |
Authors: Mondal;S.P. and Cardona;C.J. |
| Title: Comparison of four regions in the replicase gene of heterologous infectious bronchitis virus strains |
Journal: Virology 324 (1); 238-248 (2004) |
| Taxonomy: Infectious bronchitis virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| db_xref: """taxon:11120, CDD:279880, CDD:279881""" |
| Sequence: MSVLLPLLVTLLCALCSAVLYDINSYVYYYQSAFRPSNGWHLYGGAYAVVNVSNENNNAGSASTCTAGAIGYSKNFSAASIAMTAPPSGMAWSTAAFCTAHCNFTNIVVFVTHCYKSGSGSCPLTGFIQSGYIRISAMKKECSGPSCLFYNLTESVSKYPTFRSLQCVNNYTSVYLNGDLVFTSNYTQDVVAAGVHFKSGGPITYKVMREVKALAYFVNGTAQDVILCDDTPRGLLACQYNTGNFSDGFYPFTNTSIVKDKFIVYRESSVNTTLTLTNFTFSNESGAPPNTGGVNSFILYQTQTAQSGYYNFNFSFLSGFVYEESNYMYGSYHPLCSFRPENINNGLWFNSLSVSITYGPLQGGCKQSFFQGRATCCYAYSYNGPRACKGVYSGELTQSFECGLLVYITKSDGSRIQTATKAPVVTTNFYNNITLDKCVEYNIYGRVGQGFITNVTDSAFGYNYLQDGGLAILDTSGAIDIFVVKGVYGLNYYKVNPCEDVNQQFVVSGGTLVGVLTSRNETGSQFLENQFYIKLTNGTHRSRRSVNENVTSCPYVSYGKFCIKPDGSTSVIVPKELEQFVTPLLNATEYVPIPDSFNLTVTDEYIQTRMDKVQINCLQYVCGNSFECRNLFQQYGPVCDNILSIVNSVSQKEDMELLTFYSSTKPFGFNTPILSNLSTGDFNISLLLTPPSSTTGRSFIEDLLFTSVESVGLPTDDAYKKCTAGPLGFLKDLACAREYNGLLVLPPIITAEMQTMYTSSLVASMALGGITAAGAIPFATQLQARINHLGITQAVLLKNQEKIAASFNKAIGQMQEGFRSTSLALQQIQDVVNKQSAILTETMASLNKNFGAISSVIQDIYQQLDVIQADAQVDRLITGRLSSLSVLASAKQSEHIIASQQRELATQKINECVKSQSTRYSFCGNGRHVLTIPQNAPNGIVFIHFTYTPESFVNVTAIVGFCVKPANASQYAIVPANGRGIFIQFNGSYYITARDMYMPRNITAGDIVTLTSCQSNYVSVNKTVITTFVDNDDFDFDDELSKWWNDTKHELPDFDEFNYTAPILDIDSEIDRIQGVIQGLNDSLIDLETLSILKTYIKWPWYVWLAIAFATIIFILILGWVFFMTGCCGCCCGCFGIIPLMSKCGKKSSYYTTFDNDVVTEQYRPKKSV |
Nucleotide
| Nucleotide_Id: AY514485.1 |
Length: 3510bp |
| Description: Infectious bronchitis virus serotype California 99; complete genome |
Source: Infectious bronchitis virus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 6-Apr-07 |
| Class virus: Coronaviridae |
Virus name: Infectious bronchitis virus |
| CDS: AY514485.1:20372..23881 |
Host: -- |
| Authors: Mondal;S.P. and Cardona;C.J. |
Journal: Virology 324 (1); 238-248 (2004) |
| Title: Comparison of four regions in the replicase gene of heterologous infectious bronchitis virus strains |
db_xref: taxon:11120 |
| Taxonomy: Infectious bronchitis virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(27693); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(526); ExactPosition(20421); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(526); ExactPosition(12358); strand=1); FeatureLocation(ExactPosition(12357); ExactPosition(20421); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(526); ExactPosition(12388); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(20371); ExactPosition(23881); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20371); ExactPosition(23881); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(23880); ExactPosition(24558); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(23880); ExactPosition(24054); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24053); ExactPosition(24248); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24228); ExactPosition(24558); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24529); ExactPosition(25207); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24529); ExactPosition(25207); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25566); ExactPosition(26009); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25566); ExactPosition(25764); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25760); ExactPosition(26009); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25951); ExactPosition(27181); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25951); ExactPosition(27181); strand=1); type='CDS') |
| Sequence: ATGTCGGTATTACTTCCTTTACTAGTGACTCTTTTGTGTGCACTATGTAGTGCTGTTTTGTATGACATTAATTCTTATGTGTACTACTACCAAAGTGCCTTTAGACCATCTAATGGTTGGCATTTATATGGAGGTGCTTATGCAGTAGTTAATGTGTCTAATGAAAACAATAATGCAGGTAGTGCCTCAACTTGCACTGCTGGTGCTATTGGCTACAGTAAGAATTTTAGTGCGGCCTCAATAGCCATGACTGCACCACCAAGTGGTATGGCATGGTCTACCGCAGCCTTCTGCACGGCTCACTGTAATTTTACTAACATTGTAGTATTTGTTACACATTGTTATAAAAGTGGATCAGGTTCTTGTCCGTTAACAGGTTTCATTCAGTCAGGTTATATTCGTATTTCTGCTATGAAAAAAGAGTGTAGTGGTCCTTCTTGTTTGTTTTATAACCTAACTGAGTCTGTTAGTAAGTATCCCACCTTTAGGTCGCTACAATGTGTTAATAATTATACTTCTGTATATTTAAATGGTGACCTTGTTTTCACATCTAACTATACTCAAGATGTTGTAGCTGCAGGTGTCCATTTTAAAAGTGGAGGACCTATAACTTATAAAGTTATGAGAGAGGTTAAAGCCTTGGCCTATTTTGTTAATGGTACTGCACAGGATGTCATTCTATGTGATGACACACCTAGAGGTTTGTTAGCGTGCCAATATAATACTGGCAATTTTTCAGATGGCTTCTATCCTTTTACTAATACTAGTATTGTTAAGGATAAGTTTATTGTCTATCGTGAAAGTAGTGTCAATACTACTTTGACATTAACTAATTTCACGTTTAGTAATGAAAGTGGTGCCCCTCCTAATACAGGTGGTGTTAACAGTTTTATTTTATATCAGACACAAACAGCTCAGAGTGGTTATTATAACTTTAATTTTTCATTTCTGAGTGGTTTTGTTTATGAGGAAAGTAATTATATGTATGGATCTTACCATCCACTTTGTAGTTTTAGACCAGAAAACATTAATAATGGTCTCTGGTTTAATTCACTTTCTGTTTCAATTACTTACGGCCCTCTGCAAGGTGGTTGCAAACAATCTTTTTTCCAAGGTAGAGCAACGTGTTGTTATGCTTATTCATACAACGGTCCTCGTGCTTGTAAAGGTGTTTATTCAGGTGAGTTAACACAATCTTTTGAATGTGGGTTGCTTGTTTATATTACTAAGAGCGATGGCTCTCGTATACAAACAGCAACAAAAGCACCTGTAGTAACCACAAACTTTTATAATAACATCACTTTGGATAAGTGTGTTGAGTATAATATATATGGCAGAGTAGGCCAAGGTTTTATAACTAATGTAACTGACTCAGCTTTTGGTTATAATTATTTGCAAGATGGTGGGTTAGCTATCTTAGATACATCTGGTGCCATAGACATCTTTGTCGTAAAAGGTGTATATGGTCTTAATTATTATAAGGTTAACCCTTGTGAAGATGTTAACCAGCAGTTTGTAGTGTCAGGCGGCACATTAGTAGGTGTGCTCACTTCACGTAATGAAACTGGTTCTCAGTTTTTAGAAAACCAGTTTTACATTAAGCTCACTAATGGAACACATCGTTCTAGACGTTCTGTTAATGAAAATGTTACAAGTTGCCCGTATGTTAGTTATGGCAAGTTTTGTATAAAACCTGATGGTTCAACTTCTGTAATAGTACCAAAAGAACTGGAACAGTTTGTGACACCTTTACTTAATGCTACTGAATATGTGCCCATACCTGATAGTTTCAATTTGACTGTCACAGATGAGTACATACAAACACGTATGGATAAAGTTCAAATTAACTGCCTTCAATATGTCTGTGGCAATTCCTTTGAGTGTAGAAATTTGTTTCAGCAATATGGACCTGTTTGTGACAACATATTGTCGATAGTGAATAGTGTTAGTCAAAAAGAAGATATGGAACTTTTAACTTTCTACTCTTCTACTAAACCATTTGGTTTTAATACACCAATTCTTAGTAATCTTAGCACTGGCGATTTTAATATTTCTCTTTTGTTGACACCTCCTAGTAGTACTACTGGGCGCTCTTTTATTGAAGATCTTTTATTTACAAGTGTTGAATCTGTAGGATTACCAACAGATGACGCATACAAAAAGTGCACTGCAGGACCTCTAGGTTTTCTTAAAGACCTTGCATGTGCTCGTGAATATAATGGTTTGCTTGTGTTGCCTCCTATTATAACAGCAGAAATGCAAACTATGTATACTAGTTCTCTAGTAGCTTCTATGGCTCTTGGTGGTATTACTGCAGCTGGTGCTATACCTTTTGCCACACAACTGCAGGCCAGAATTAATCACTTGGGTATCACCCAGGCAGTCTTGTTGAAGAACCAAGAAAAAATTGCTGCTTCCTTTAATAAGGCCATTGGCCAAATGCAGGAAGGTTTTAGGAGTACATCTCTAGCATTACAACAAATTCAAGATGTTGTTAATAAGCAGAGTGCTATTCTTACTGAGACTATGGCATCACTTAATAAAAATTTTGGTGCTATTTCTTCTGTGATTCAAGACATTTACCAGCAACTTGATGTTATACAAGCAGACGCTCAAGTGGATCGACTTATAACTGGTAGATTGTCATCACTCTCTGTCTTAGCATCTGCTAAGCAGTCGGAGCACATTATAGCATCACAACAACGTGAGTTAGCTACTCAGAAAATTAATGAGTGTGTTAAATCACAGTCTACTAGGTACTCTTTTTGTGGTAATGGAAGACATGTTCTAACCATACCGCAAAATGCACCTAATGGTATAGTGTTTATACACTTTACTTATACTCCAGAGAGTTTTGTTAATGTTACTGCAATAGTGGGTTTTTGTGTAAAGCCTGCTAATGCTAGTCAGTATGCAATAGTGCCTGCTAATGGTAGAGGTATTTTTATACAATTTAATGGTAGTTACTACATCACTGCACGAGATATGTATATGCCAAGAAATATTACTGCAGGAGATATAGTTACGCTTACTTCTTGTCAATCAAATTATGTAAGTGTAAATAAGACCGTCATTACTACATTTGTAGACAATGATGATTTTGATTTTGATGACGAATTGTCAAAATGGTGGAATGATACTAAGCATGAGCTACCAGACTTTGACGAATTCAATTACACAGCACCTATACTTGACATTGATAGTGAAATTGATCGTATTCAAGGCGTTATACAGGGCCTTAATGACTCTCTAATAGACCTTGAAACACTATCAATACTCAAAACTTATATTAAGTGGCCTTGGTATGTGTGGTTAGCCATAGCTTTTGCCACTATTATCTTCATCCTAATATTAGGGTGGGTGTTTTTCATGACTGGTTGTTGTGGTTGTTGTTGTGGATGCTTTGGCATTATTCCTCTAATGAGCAAGTGTGGTAAGAAATCTTCTTATTACACGACTTTTGATAATGATGTGGTAACTGAACAATACAGACCTAAAAAGTCTGTTTAA |