Protein

Protein Id:  AAU09490.1 Length:   1162 aa
Description:   spike protein Infectious bronchitis virus. Molecule type:   linear
Data category:   VRL Date:   25-Feb-05
Source:   Infectious bronchitis virus
Class virus:   Coronaviridae Virus name:   Infectious bronchitis virus
Host:   peafowl Authors:   Liu;S.; Chen;J.; Chen;J.; Kong;X.; Shao;Y.; Han;Z.; Feng;L.; Cai;X.; Gu;S. and Liu;M.
Title:   Isolation of avian infectious bronchitis coronavirus from domestic peafowl (Pavo cristatus) and teal (Anas) Journal:   J Gen Virol 86 (PT 3); 719-725 (2005)
Taxonomy:   Infectious bronchitis virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus.
db_xref:   """taxon:11120, CDD:279880, CDD:279881"""
Sequence:   MLVTSLLLVTLLCALCSAVLYDSSSYVYYYQSAFRPPDGWHLHGGAYAVVNISSESNNAGSSSGCTVGIIHGGRVVNASSIAMTAPSSGMAWSSSQFCTAYCNFSDTTVFVTHCYKHVGCPITGMLQQHSIRVSAMKNGQLFYNLTVSVAKYPTFKSFQCVNNLTSVYLNGDLVYTSNETTDVTSAGVYFKAGGPITYKVMREVRALAYFVNGTAQDVILCDGSPRGLLACQYNTGNFSDGFYPFTNSSLVKQKFIVYRENSVNTTFTLHNFTFHNETGANPNPSGVQNIQTYQTQTAQSGYYNFNFSFLSSFVYKESNFMYGSYHPSCNFRLETINNGLWFNSLSVSIAYGPLQGGCKQSVFSGRATCCYAYSYGGPLLCKGVYSGELDHNFECGLLVYVTKSGGSRIQTATEPPVITRHNYNNITLNTCVDYNIYGRTGQGFITNVTDSAVSYNYLADAGLAILDTSGSIDIFVVQSEYGLNYYKVNPCEDVNQQFVVSGGKLVGILTSRNETGSQLLENQFYIKITNGTRRFRRSITESVENCPYVSYGKFCIKPDGSIATIVPKQLEQFVAPLLNVTENVLIPNSFNLTVTDEYIQTRMDKVQINCLQYICGNSLECRNLFQQYGPVCDNILSVVNSVGQKEDMELLNFYSSTKPAGFNTPVLSNVSTGEFNISLFLTTPSSPRRRSFIEDLLFTSVESVGLPTDDAYKNCTAGPLGFLKDLVCAREYNGLLVLPPIITAEMQTLYTSSLVASMAFGGITAAGAIPFATQLQARINHLGITQSLLLKNQEKIAASFNKAIGHMQEGFRSTSLALQQIQDVVNKQSAILTETMASLNKNFGAISSVIQEIYQQLDAIQANAQVDRLITGRLSSLSVLASAKHAEYDRGLQQRELATQKINECVKSQSIRYSFCGNGRHVLTIPQNAPNGIVFIHFSYTPDSFVNVTAMVGFCVKPANASQYAIVPANGRGIFIQVNGSYYITARDMYMPRAITAGDIVTLTSCQVNYVSVNKTVITTFVDNDDFDFNDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLEKLSILKTYIKWPWYVWLAIAFATIIFILILGWVFFMTGCCGCCCGCFGIMPLMSKCGKKSSYYTTFDNDVVTEQYRPKKSV

Nucleotide

Nucleotide_Id:  AY702085.1 Length:   3489bp
Description:   Avian infectious bronchitis virus strain LKQ3 spike protein; 3a protein; 3b protein; 3c protein; membrane protein; 5a protein; 5b protein; and nucleocapsid protein genes; complete cds Source:   Infectious bronchitis virus
Nucleotide_type:   RNA Molecule type:   linear
Data category:   VRL Date:   25-Feb-05
Class virus:   Coronaviridae Virus name:   Infectious bronchitis virus
CDS:   AY702085.1:1..3489 Host:   peafowl
Authors:   Liu;S.; Chen;J.; Chen;J.; Kong;X.; Shao;Y.; Han;Z.; Feng;L.; Cai;X.; Gu;S. and Liu;M. Journal:   J Gen Virol 86 (PT 3); 719-725 (2005)
Title:   Isolation of avian infectious bronchitis coronavirus from domestic peafowl (Pavo cristatus) and teal (Anas) db_xref:   taxon:11120
Taxonomy:   Infectious bronchitis virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus.
Features:   SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(6773); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(3489); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3488); ExactPosition(3662); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3661); ExactPosition(3856); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3839); ExactPosition(4166); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4137); ExactPosition(4815); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5158); ExactPosition(5356); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5352); ExactPosition(5601); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5543); ExactPosition(6773); strand=1); type='CDS')
Sequence:   ATGTTGGTAACATCTCTTTTACTAGTGACTCTTTTGTGTGCACTATGTAGTGCTGTTTTGTATGACAGTAGTTCTTACGTGTACTACTACCAAAGTGCCTTCAGACCACCTGATGGTTGGCATTTACATGGGGGTGCGTATGCGGTTGTTAATATTTCTAGTGAATCTAATAATGCAGGCTCTTCATCTGGGTGTACTGTTGGTATTATTCATGGTGGTCGTGTTGTTAATGCTTCTTCTATAGCTATGACGGCACCGTCATCAGGTATGGCTTGGTCTAGCAGTCAGTTTTGTACTGCATACTGTAACTTTTCAGATACTACAGTGTTTGTTACACATTGTTATAAACATGTTGGGTGTCCTATAACTGGCATGCTTCAACAGCATTCTATACGTGTTTCTGCTATGAAAAATGGCCAGCTTTTTTATAATTTAACAGTTAGTGTAGCTAAGTACCCTACTTTTAAATCATTTCAGTGTGTTAATAATTTAACATCCGTATATTTAAATGGTGATCTTGTTTACACCTCTAATGAGACCACAGATGTTACATCTGCAGGTGTTTATTTTAAAGCTGGTGGACCTATAACTTATAAAGTTATGAGAGAAGTTAGAGCCCTGGCTTATTTTGTTAATGGTACTGCACAAGATGTTATTTTGTGTGATGGGTCACCTAGAGGCTTGTTAGCATGCCAGTATAATACTGGCAATTTTTCAGATGGCTTTTATCCTTTTACTAATAGTAGTTTAGTTAAGCAGAAGTTTATTGTCTATCGTGAAAATAGTGTTAATACTACTTTTACGTTACACAATTTCACTTTTCATAATGAGACTGGCGCCAACCCAAATCCTAGTGGTGTCCAGAATATTCAAACTTACCAAACACAAACAGCTCAGAGTGGTTATTATAATTTTAATTTTTCCTTTCTGAGTAGTTTTGTTTATAAGGAGTCTAATTTTATGTATGGATCTTATCACCCAAGTTGTAATTTTAGACTAGAAACTATTAATAATGGTTTGTGGTTTAATTCACTTTCAGTTTCAATTGCTTACGGTCCTCTTCAAGGTGGTTGCAAGCAATCTGTCTTTAGTGGTAGAGCAACCTGTTGTTATGCTTACTCATATGGAGGTCCTTTGCTGTGTAAAGGTGTTTATTCAGGTGAGTTAGATCATAATTTTGAATGTGGACTGTTAGTTTATGTTACTAAGAGCGGTGGCTCTCGTATACAAACAGCCACTGAACCGCCAGTTATAACTCGACACAATTATAATAATATTACTTTAAATACTTGTGTTGATTATAATATATATGGCAGAACTGGCCAAGGTTTTATTACTAATGTAACCGACTCAGCTGTTAGTTATAATTATCTAGCAGACGCAGGTTTGGCTATTTTAGATACATCTGGTTCCATAGACATCTTTGTCGTACAAAGTGAATATGGTCTTAATTATTATAAGGTTAACCCTTGCGAAGATGTCAACCAGCAGTTTGTAGTTTCTGGTGGTAAATTAGTAGGTATTCTTACTTCACGTAATGAGACTGGTTCCCAGCTTCTTGAGAATCAGTTTTACATCAAAATCACTAATGGAACACGTCGTTTTAGACGTTCTATTACTGAAAGTGTTGAAAATTGCCCTTATGTTAGTTATGGTAAGTTTTGTATAAAACCTGATGGCTCAATTGCCACAATAGTACCAAAACAATTGGAACAGTTTGTGGCACCTTTACTTAATGTTACTGAAAATGTGCTCATACCTAACAGTTTTAATTTAACTGTTACAGATGAGTACATACAAACGCGTATGGATAAGGTCCAAATTAATTGCCTGCAGTATATTTGTGGCAATTCTCTGGAGTGCAGAAATTTGTTTCAACAATATGGTCCTGTTTGCGACAACATATTGTCTGTAGTAAATAGTGTTGGTCAAAAAGAAGATATGGAACTTTTGAATTTCTATTCTTCTACTAAGCCGGCTGGTTTTAATACACCAGTTCTTAGTAATGTTAGCACTGGTGAGTTTAATATTTCTCTTTTTTTAACAACGCCTAGTAGTCCTAGAAGGCGTTCTTTTATTGAAGACCTTCTATTTACAAGTGTTGAATCTGTTGGATTACCAACAGATGACGCATACAAAAATTGCACTGCAGGTCCTTTAGGCTTTCTTAAGGACCTTGTATGTGCTCGTGAATATAATGGTTTGCTTGTGTTGCCTCCTATTATAACAGCAGAAATGCAAACTTTGTATACTAGTTCTCTAGTAGCTTCTATGGCTTTTGGTGGTATTACTGCAGCTGGTGCTATACCTTTTGCCACACAACTGCAGGCTAGAATTAATCACTTGGGTATTACCCAGTCACTTCTTTTGAAGAATCAAGAAAAAATTGCTGCTTCCTTTAATAAGGCCATCGGTCATATGCAGGAAGGTTTTAGAAGTACATCTTTAGCATTACAACAAATTCAAGATGTTGTTAATAAGCAGAGTGCTATTCTTACTGAGACTATGGCATCACTTAATAAAAATTTTGGTGCCATTTCTTCTGTGATTCAAGAAATCTACCAGCAACTTGACGCCATACAAGCAAATGCTCAAGTGGATCGTCTTATAACTGGTAGATTGTCATCACTTTCTGTTTTAGCATCTGCTAAGCACGCGGAGTACGATCGAGGGTTACAACAGCGTGAGTTAGCTACTCAGAAGATTAATGAGTGTGTTAAGTCACAGTCCATTAGGTACTCCTTTTGTGGTAATGGACGACATGTTTTAACCATACCGCAAAATGCACCTAATGGTATAGTGTTTATACACTTTTCTTACACTCCAGATAGTTTTGTTAATGTTACTGCAATGGTGGGTTTTTGTGTAAAGCCAGCTAATGCTAGTCAGTATGCAATAGTACCCGCTAATGGTAGGGGTATTTTTATACAAGTTAATGGTAGTTACTACATCACTGCACGAGATATGTATATGCCAAGAGCTATTACTGCAGGAGATATAGTTACGCTTACTTCTTGTCAAGTAAATTATGTAAGTGTAAATAAGACCGTCATTACTACATTCGTAGACAATGATGATTTTGATTTTAATGACGAATTGTCAAAATGGTGGAATGATACTAAGCATGAGCTACCAGACTTTGACAAATTCAATTACACAGTACCTATACTTGACATTGATAGTGAAATTGATCGTATTCAAGGCGTTATACAGGGTCTTAATGACTCTCTAATAGACCTTGAAAAACTTTCAATACTCAAAACTTATATTAAGTGGCCTTGGTATGTGTGGTTAGCCATAGCTTTTGCCACTATTATCTTCATCTTAATATTAGGATGGGTTTTCTTCATGACTGGGTGTTGTGGTTGTTGTTGTGGATGCTTTGGCATTATGCCTCTAATGAGTAAGTGTGGTAAGAAATCTTCTTATTACACGACTTTTGATAACGATGTGGTAACTGAACAATACAGACCTAAAAAGTCTGTTTAA