| Protein Id: AAV28722.1 |
Length: 1162 aa |
| Description: S protein Infectious bronchitis virus. |
Molecule type: linear |
| Data category: VRL |
Date: 9-Nov-06 |
| Source: Infectious bronchitis virus |
| Class virus: Coronaviridae |
Virus name: Infectious bronchitis virus |
| Host: -- |
Authors: Liu;S.; Chen;J.; Han;Z.; Zhang;Q.; Shao;Y.; Kong;X. and Tong;G. |
| Title: Infectious bronchitis virus: S1 gene characteristics of vaccines used in China and efficacy of vaccination against heterologous strains from China |
Journal: Avian Pathol 35 (5); 394-399 (2006) |
| Taxonomy: Infectious bronchitis virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| db_xref: """taxon:11120, CDD:279880, CDD:279881""" |
| Sequence: MLVTPLLLVTLLCALCSAVLYDSSSYVYYYQSAFRPPDGWHLHGGAYAVANISSESNNAGSSSGCTVGIIHGGRVVNASSIAMTAPSSGMAWSSSQFCTAYCNFSDTTVFVTHCYKHGGCPITGMLQQHSIRVSAMKNGQLFYNLTVSVAKYPTFKSFQCVNNLTSVYLNGDLVYTSNETTDVTSAGVYFKAGGPITYKVMREVRALAYFVNGTAQDVILCDGSPRGLLACQYNTGNFSDGFYPFTNSSLVKQKFIVYRENSVNTTFTLHNFTFHNETGANPNPSGVQNIQTYQTQTAQSGYYNFNFSFLSSFVYKESNFMYGSYYPSCNFRLETINNGLWFNSLSVSIAYGPLQGGCKQSVFSGRATCCYAYSYGGPLLCKGVYSGELDHNFECGLLVYVTKSGGSRIQTATEPPVITQHNYNNITLNTCVDYNIYGRTGQGFITNVTDSAVSYNYLADAGLAILDTSGSIDIFVVQSEYGLNYYKVNPCEDVNQQFVVSGGKLVGILTSRNETGSQLLENQFYIKITNGTRRFRRSITESVENCPYVSYGKFCIKPDGSIATIVPKQLEQFVAPLLNVTENVLIPNSFNLTVTDEYIQTRMDKVQINCLQYICGNSLECRNLFQQYGPVCDNILSVVNSVGQKEDMELLNFYSSTKPAGFNTPVLSNVSTGEFNISLFLTTPSSPRRRSFIEDLLFTSVESVGLPTDDAYKNCTAGPLGFLKDLVCAREYNGLLVLPPIITAEMQTLYTSSLVASMAFGGITAAGAIPFATQLQARINHLGITQSLLLKNQEKIAASFNKAIGHMQEGFRSTSLALQQIQDVVNKQSAILTETMASLNKNFGAISSVIQEIYQQLDAIQANAQVDRLITGRLSSLSVLASAKQAEYIRVSQQRELATQKINECVKSQSIRYSFCGNGRHVLTIPQNAPNGIVFIHFTYTPESFINVTAIVGFCVSPANASQYAIVPANGRGIFIQVNGSYYITARDMYMPRDITAGDIVTLTSCQANYVSVNKTVITTFVDNDDFDFDDELSKWWNDTKHELPDFDKFNYTVPILDIDSEIDRIQGVIQGLNDSLIDLETLSILKTYIKWPWYVWLAIAFATIIFILILGWLFFMTGCCGCCCGCFGIIPLMSKCGKKSSYYTTFDNDVVTEQYRPKKSV |
Nucleotide
| Nucleotide_Id: AY761141.1 |
Length: 3489bp |
| Description: Avian infectious bronchitis virus strain HK S protein (S); 3a protein (3a); 3b protein (3b); envelope protein (E); membrane protein (M); 5a protein (5a); 5b protein (5b); and nucleocapsid protein (N) genes; complete cds |
Source: Infectious bronchitis virus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 9-Nov-06 |
| Class virus: Coronaviridae |
Virus name: Infectious bronchitis virus |
| CDS: AY761141.1:1..3489 |
Host: -- |
| Authors: Liu;S.; Chen;J.; Han;Z.; Zhang;Q.; Shao;Y.; Kong;X. and Tong;G. |
Journal: Avian Pathol 35 (5); 394-399 (2006) |
| Title: Infectious bronchitis virus: S1 gene characteristics of vaccines used in China and efficacy of vaccination against heterologous strains from China |
db_xref: taxon:11120 |
| Taxonomy: Infectious bronchitis virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(6783); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(3489); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(3489); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3488); ExactPosition(3662); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(3488); ExactPosition(3662); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3661); ExactPosition(3856); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(3661); ExactPosition(3856); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3836); ExactPosition(4160); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(3836); ExactPosition(4160); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4137); ExactPosition(4809); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(4137); ExactPosition(4809); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5168); ExactPosition(5366); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(5168); ExactPosition(5366); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5362); ExactPosition(5611); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(5362); ExactPosition(5611); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5553); ExactPosition(6783); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(5553); ExactPosition(6783); strand=1); type='CDS') |
| Sequence: ATGTTGGTAACACCTCTTTTACTAGTGACTCTTTTGTGTGCACTATGTAGTGCTGTTTTGTATGACAGTAGTTCTTACGTGTACTACTACCAAAGTGCCTTCAGACCACCTGATGGTTGGCATTTACATGGGGGTGCGTATGCGGTTGCTAATATTTCTAGTGAATCTAATAATGCAGGCTCTTCATCTGGGTGTACTGTTGGTATTATTCATGGTGGTCGTGTTGTTAATGCTTCTTCTATAGCTATGACGGCACCGTCATCAGGTATGGCTTGGTCTAGCAGTCAGTTTTGTACTGCATACTGTAACTTTTCAGATACTACAGTGTTTGTTACACATTGTTATAAACATGGTGGGTGTCCTATAACTGGCATGCTTCAACAGCATTCTATACGTGTTTCTGCTATGAAAAATGGCCAGCTTTTTTATAATTTAACAGTTAGTGTAGCTAAGTACCCTACTTTTAAATCATTTCAGTGTGTTAATAATTTAACATCCGTATATTTAAATGGTGATCTTGTTTACACCTCTAATGAGACCACAGATGTTACATCTGCAGGTGTTTATTTTAAAGCTGGTGGACCTATAACTTATAAAGTTATGAGAGAAGTTAGAGCCCTGGCTTATTTTGTTAATGGTACTGCACAAGATGTTATTTTGTGTGATGGGTCACCTAGAGGCTTGTTAGCATGCCAGTATAATACTGGCAATTTTTCAGATGGCTTTTATCCTTTTACTAATAGTAGTTTAGTTAAGCAGAAGTTTATTGTCTATCGTGAAAATAGTGTTAATACTACTTTTACGTTACACAATTTCACTTTTCATAATGAGACTGGCGCCAACCCAAATCCTAGTGGTGTCCAGAATATTCAAACTTACCAAACACAAACAGCTCAGAGTGGTTATTATAATTTTAATTTTTCCTTTCTGAGTAGTTTTGTTTATAAGGAGTCTAATTTTATGTATGGATCTTATTACCCAAGTTGTAATTTTAGACTAGAAACTATTAATAATGGTTTGTGGTTTAATTCACTTTCAGTTTCAATTGCTTACGGTCCTCTTCAAGGTGGTTGCAAGCAATCTGTCTTTAGTGGTAGAGCAACCTGTTGTTATGCTTACTCATATGGAGGTCCTTTGCTGTGTAAAGGTGTTTATTCAGGTGAGTTAGATCATAATTTTGAATGTGGACTGTTAGTTTATGTTACTAAGAGCGGTGGCTCTCGTATACAAACAGCCACTGAACCGCCAGTTATAACTCAACACAATTATAATAATATTACTTTAAATACTTGTGTTGATTATAATATATATGGCAGAACTGGCCAAGGTTTTATTACTAATGTAACCGACTCAGCTGTTAGTTATAATTATCTAGCAGACGCAGGTTTGGCTATTTTAGATACATCTGGTTCCATAGACATCTTTGTCGTACAAAGTGAATATGGTCTTAATTATTATAAGGTTAACCCTTGCGAAGATGTCAACCAGCAGTTTGTAGTTTCTGGTGGTAAATTAGTAGGTATTCTTACTTCACGTAATGAGACTGGTTCCCAGCTTCTTGAGAATCAGTTTTACATCAAAATCACTAATGGAACACGTCGTTTTAGACGTTCTATTACTGAAAGTGTTGAAAATTGCCCTTATGTTAGTTATGGTAAGTTTTGTATAAAACCTGATGGCTCAATTGCCACAATAGTACCAAAACAATTGGAACAGTTTGTGGCACCTTTACTTAATGTTACTGAAAATGTGCTCATACCTAACAGTTTTAATTTAACTGTTACAGATGAGTACATACAAACGCGTATGGATAAGGTCCAAATTAATTGCCTGCAGTATATTTGTGGCAATTCTCTGGAGTGCAGAAATTTGTTCCAACAATATGGTCCTGTTTGCGACAACATATTGTCTGTAGTAAATAGTGTTGGTCAAAAAGAAGATATGGAACTTTTGAATTTCTATTCTTCTACTAAGCCGGCTGGTTTTAATACACCAGTTCTTAGTAATGTTAGCACTGGTGAGTTTAATATTTCTCTTTTTTTAACAACGCCTAGTAGTCCTAGAAGGCGTTCTTTTATTGAAGACCTTCTATTTACAAGTGTTGAATCTGTTGGATTACCAACAGATGACGCATACAAAAATTGCACTGCAGGTCCTTTAGGCTTTCTTAAGGACCTTGTATGTGCTCGTGAATATAATGGTTTGCTTGTGTTGCCTCCTATTATAACAGCAGAAATGCAAACTTTGTATACTAGTTCTCTAGTAGCTTCTATGGCTTTTGGTGGTATTACTGCAGCTGGTGCTATACCTTTTGCCACACAACTGCAGGCTAGAATTAATCACTTGGGTATTACCCAGTCACTTCTTTTGAAGAATCAAGAAAAAATTGCTGCTTCCTTTAATAAGGCCATCGGTCATATGCAGGAAGGTTTTAGAAGTACATCTTTAGCATTACAACAAATTCAAGATGTTGTTAATAAGCAGAGTGCTATTCTTACTGAGACTATGGCATCACTTAATAAAAATTTTGGTGCCATTTCTTCTGTGATTCAAGAAATCTACCAGCAACTTGACGCCATACAAGCAAATGCTCAAGTGGATCGTCTTATAACTGGTAGATTGTCATCACTTTCTGTTTTAGCATCTGCTAAGCAGGCGGAGTATATTAGAGTGTCACAACAGCGTGAGTTAGCTACTCAGAAGATTAATGAGTGTGTCAAGTCACAGTCCATTAGGTACTCCTTTTGTGGTAATGGACGACATGTTTTAACCATACCACAAAATGCCCCTAATGGTATAGTGTTTATACACTTTACTTATACACCAGAGAGCTTTATTAATGTTACTGCAATAGTGGGTTTTTGTGTAAGTCCTGCTAATGCTAGTCAGTATGCAATAGTGCCCGCTAATGGTAGGGGTATTTTTATACAAGTTAATGGTAGTTACTACATCACTGCACGAGATATGTATATGCCAAGAGATATTACTGCAGGAGATATAGTTACGCTTACTTCTTGTCAAGCAAATTATGTAAGTGTAAATAAGACCGTCATTACTACATTTGTAGACAATGATGATTTTGATTTTGATGATGAATTGTCAAAATGGTGGAATGATACTAAGCATGAGCTACCAGACTTTGACAAATTCAATTACACAGTACCTATACTTGACATTGATAGTGAAATTGATCGTATTCAAGGCGTTATACAGGGTCTTAACGACTCTCTAATAGACCTTGAAACACTATCAATACTCAAAACTTATATTAAGTGGCCTTGGTATGTGTGGTTAGCCATAGCTTTTGCCACTATTATCTTCATCTTAATACTAGGATGGTTGTTTTTCATGACTGGTTGTTGTGGTTGTTGTTGTGGATGCTTTGGCATTATTCCTTTAATGAGTAAGTGTGGTAAGAAATCTTCTTATTACACGACTTTTGATAATGATGTGGTAACTGAACAATACAGACCTAAAAAGTCTGTTTAA |