| Protein Id: AAM19716.1 |
Length: 1386 aa |
| Description: spike protein Porcine epidemic diarrhea virus. |
Molecule type: linear |
| Data category: VRL |
Date: 23-Aug-05 |
| Source: Porcine epidemic diarrhea virus (PEDV) |
| Class virus: Coronaviridae |
Virus name: Porcine epidemic diarrhea virus |
| Host: -- |
Authors: Kang;T.J.; Seo;J.E.; Kim;D.H.; Kim;T.G.; Jang;Y.S. and Yang;M.S. |
| Title: Cloning and sequence analysis of the Korean strain of spike gene of porcine epidemic diarrhea virus and expression of its neutralizing epitope in plants |
Journal: Protein Expr Purif 41 (2); 378-383 (2005) |
| Taxonomy: Porcine epidemic diarrhea virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus. |
| db_xref: """taxon:28295, CDD:279880, CDD:279881, CDD:223910""" |
| Sequence: MRSLIYFWLSLPVLPTLSLPQDVYRCSARTNFRRFFSKFNVQAPAVVVLGGYLPSGETQGGAPRWYCAGRHETASGVHGIFLSHIRGGHGFEIGISQEPLDPSGYQLYLHKATNGNTNATARLRICQFPSNKTLGPTANDDVTTGRNCLFNKAIPAHMSEHSVVGITWDNDRVTVFADKIYHFYLKNEWSRVATKCYNSGGCAMQYVYEPIYYMLNVTSAGEDGISYQPCTANCIGYAANVFATESNGHIPEGFSFNNWFLLSNDSTLFHGKVVSNQPLLVNCLWAIPKIYGLGHFFSFNQTMDGVCNGATAYRAPEALRFNINDTSVILAEGSIVLHTALGTNLSFVCSNSSDPHKAIFSIPLGATQVPYYCFLKVDTYNSTVYKFLAVLPPTVREIVITKYGDVYVNGFGYLHLGLLDAVTINFTGHGTNDDVSGFWTIASTNFIDALVEVRATAIQRILYCDDPVCQLKCSQVSFDLDDGFYPISSRNLLSHEQPISFVTLPSFNDHSFVNITVSAAFGDSGGANLVASDTTINGFSSFCVDTRQFTIRLFYNVTSSYGYVSKSQDSNCPFTLQSVNDYLSFSKFCVSTSLLAGACTIDLFGYPAFGSGVKFTSLYFQFTKGELITGTPKPLEGVTDVSFMTLDVCTKYTIYGFKGEGIITLTNSSFLAGVYYTSDSGQLLAFKNVTSGAVYSVTPCSFSEQAAYVDDDIVGGISSLSNSTFNNXRDFPGFFYHSNDGSNCTEPVLVYSNIGVCKSGSIGYVPLQDGQVKIAPTVIGNISIPTNFSMSIRTEYLQLYNTPVSVDCATYVCNGNSRCKQLLTQYTAACKTIESALELSARLESVEVNSMLTISEEALQLATISSFNGDGYNFTNVLGVSVYDSESGRVVHERSFIEDLLFNKXVTNGLGTVDEDYKRCSNGRSVADLVCAQYYSGIMVLPGVVDAEKLHMYSASLIGGMALGGFTAAVALPFSYAVQARLNYLALQTDVLQRNQQLLAESFNSAIGSITSAFESVNEAISQTSKGLNTVAHALTKVQEVVNSQGSALTQLTIQLQHNFQAISSSIDDIYSRLDILSADVQVDRLITGRLSALNAFVAQTLTKYTEVQASRKLAQQKVNECVKSQSQRYGFCGGDGEHIFSLVQAAPQGLLFLHTVLVPGDFVNVIAIAGLCVNGDIALTLREPGLVLFTHELQTHTATEYFVSSRRMFEPRKPTVSDFVQIQSCVVTYVNLTSDQLPDVIPDYVDVNKTLDEILASLPNRTGPNLPLDVFNATYLNLTGEIADLEQRSESLRNTTEELRSLIYNINNTLVDLEWLNRVETYIKWPWWVWLIVFIVLIFVVSLLVFCCISTGCCGCCGCCGACFSGCCRGPRLQPYEAFEKVHVQ |
Nucleotide
| Nucleotide_Id: AF500215.1 |
Length: 4161bp |
| Description: Porcine epidemic diarrhea virus spike protein (Spk1) gene; complete cds |
Source: Porcine epidemic diarrhea virus (PEDV) |
| Nucleotide_type: ss-RNA |
Molecule type: linear |
| Data category: VRL |
Date: 23-Aug-05 |
| Class virus: Coronaviridae |
Virus name: Porcine epidemic diarrhea virus |
| CDS: AF500215.1:1..4161 |
Host: -- |
| Authors: Kang;T.J.; Seo;J.E.; Kim;D.H.; Kim;T.G.; Jang;Y.S. and Yang;M.S. |
Journal: Protein Expr Purif 41 (2); 378-383 (2005) |
| Title: Cloning and sequence analysis of the Korean strain of spike gene of porcine epidemic diarrhea virus and expression of its neutralizing epitope in plants |
db_xref: taxon:28295 |
| Taxonomy: Porcine epidemic diarrhea virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(4161); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(4161); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(4161); strand=1); type='CDS') |
| Sequence: ATGAGGTCTTTAATTTACTTTTGGTTGTCCTTACCAGTACTTCCAACACTCAGCCTACCACAAGATGTCTATAGGTGCTCAGCTAGGACTAACTTTAGGCGGTTCTTTTCAAAGTTTAATGTTCAGGCGCCTGCAGTCGTTGTACTGGGCGGTTATCTACCTAGTGGTGAAACACAGGGTGGGGCACCACGTTGGTACTGTGCTGGCCGACATGAAACTGCTAGTGGCGTTCATGGTATCTTTCTTAGCCATATTAGAGGTGGTCACGGCTTTGAGATTGGCATTTCGCAAGAGCCGTTAGACCCTAGTGGTTACCAGCTTTATTTACATAAGGCCACTAACGGTAACACTAATGCTACTGCGCGACTGCGTATTTGCCAGTTTCCCAGCAATAAAACATTGGGCCCCACTGCTAATGATGATGTTACAACAGGTCGTAACTGCCTATTTAACAAAGCCATTCCAGCTCATATGAGTGAACATAGTGTTGTCGGCATAACATGGGATAATGATCGTGTCACTGTTTTTGCTGACAAGATCTATCATTTTTATCTTAAAAATGAGTGGTCCCGTGTTGCGACAAAATGTTACAACAGTGGAGGTTGTGCTATGCAATATGTTTACGAACCTATTTACTACATGCTTAATGTTACTAGTGCTGGTGAGGATGGTATTTCTTATCAACCCTGTACAGCTAATTGCATTGGTTATGCTGCCAATGTATTTGCCACTGAGTCCAATGGCCACATACCAGAAGGTTTTAGTTTTAATAATTGGTTTCTTTTGTCCAATGATTCCACTTTGTTTCATGGTAAAGTGGTTTCCAACCAACCTTTGTTGGTCAACTGTCTTTGGGCCATTCCTAAGATTTACGGACTAGGCCACTTTTTCTCATTCAACCAAACGATGGATGGCGTTTGTAACGGAGCTACTGCGTATCGTGCCCCAGAGGCTCTGAGGTTTAATATTAATGACACTTCTGTCATTCTTGCCGAAGGCTCAATTGTACTTCATACTGCTTTAGGAACAAATCTTTCTTTTGTTTGCAGTAATTCCTCAGATCCTCACAAAGCCATCTTTTCCATACCTCTGGGTGCTACCCAAGTACCCTACTATTGCTTTCTTAAAGTTGATACTTACAACTCCACTGTCTATAAATTTCTTGCTGTTTTACCTCCTACTGTCAGGGAAATTGTCATCACCAAGTACGGTGATGTTTATGTCAATGGGTTTGGCTACTTGCATCTCGGTTTGTTGGATGCTGTCACAATTAACTTCACTGGCCATGGCACTAACGATGACGTCTCAGGTTTCTGGACCATAGCATCGACTAATTTTATTGATGCACTCGTCGAGGTTCGAGCAACTGCCATTCAGCGTATTCTTTATTGTGATGATCCTGTTTGCCAACTCAAGTGTTCTCAGGTTTCTTTTGACCTTGATGATGGTTTTTACCCTATTTCTTCTAGAAACCTTCTTAGTCATGAACAGCCAATTTCTTTTGTTACTTTGCCATCATTTAATGATCATTCTTTTGTTAATATTACTGTGTCTGCGGCTTTTGGTGATTCTGGTGGTGCCAACCTCGTTGCATCTGACACTACTATCAATGGGTTCAGTTCTTTCTGTGTTGACACTAGACAATTTACCATTAGACTGTTTTACAACGTTACAAGCAGTTATGGTTATGTGTCTAAATCACAGGATAGCAATTGCCCTTTCACCTTGCAATCTGTTAATGATTACCTGTCTTTTAGCAAATTTTGTGTTTCAACCAGCCTTTTGGCTGGTGCTTGTACCATAGATCTTTTTGGTTACCCTGCTTTCGGTAGTGGTGTTAAGTTTACGTCCCTCTATTTTCAATTCACAAAGGGTGAGTTGATTACTGGCACGCCTAAACCACTTGAAGGTGTCACGGACGTTTCTTTTATGACTCTGGATGTGTGTACCAAGTATACTATTTATGGCTTTAAAGGTGAGGGTATTATTACCCTTACAAATTCTAGCTTTTTGGCAGGTGTTTATTATACATCTGATTCTGGACAGTTGTTAGCCTTTAAGAATGTCACTAGTGGTGCTGTTTATTCTGTTACGCCATGTTCTTTTTCAGAGCAGGCTGCTTATGTAGATGATGATATAGTGGGTGGTATTTCTAGTTTGTCTAACTCCACTTTTAACAATNNTAGGGATTTTCCCGGTTTCTTCTACCATTCTAATGACGGCTCCAATTGCACAGAGCCTGTGTTGGTGTATAGTAACATAGGTGTCTGTAAATCTGGTAGTATTGGCTATGTCCCACTTCAGGATGGCCAAGTCAAGATTGCACCCACGGTTATTGGGAATATTAGTATTCCCACCAACTTTAGTATGAGTATTAGAACAGAATATTTACAGCTTTACAACACGCCTGTTAGTGTTGATTGTGCTACATATGTTTGTAATGGTAACTCTCGTTGTAAACAATTACTTACCCAGTACACTGCAGCATGTAAGACCATAGAGTCAGCATTAGAACTCAGCGCTAGGCTTGAGTCTGTTGAAGTTAACTCTATGCTTACTATTTCTGAAGAGGCCTTACAGTTAGCTACCATCAGTTCGTTTAATGGTGATGGGTATAACTTTACTAATGTGTTGGGTGTTTCTGTGTACGATTCTGAAAGTGGCAGGGTGGTACACGAAAGGTCTTTTATTGAAGACCTGCTTTTTAATAAGGNGGTTACTAATGGCCTTGGTACTGTTGATGAAGACTATAAGCGCTGTTCTAATGGTCGCTCTGTGGCTGATCTAGTCTGTGCGCAGTATTACTCTGGTATCATGGTACTACCTGGCGTTGTTGACGCTGAGAAGCTTCACATGTATAGTGCGTCTCTCATCGGTGGTATGGCGCTAGGAGGTTTTACTGCCGCAGTGGCATTGCCTTTTAGCTATGCTGTTCAAGCGAGACTCAATTATCTTGCTTTACAGACGGATGTTCTACAGCGGAACCAGCAACTGCTTGCTGAGTCTTTTAACTCTGCTATTGGTAGTATAACCTCAGCCTTTGAGAGTGTTAATGAGGCTATCAGTCAAACTTCTAAGGGTTTGAATACTGTGGCTCATGCGCTTACTAAAGTTCAAGAGGTTGTTAATTCGCAGGGTTCAGCTTTGACTCAACTTACCATACAGCTGCAACATAACTTCCAAGCCATTTCTAGTTCTATTGATGACATTTACTCCCGACTGGACATTCTTTCAGCCGATGTTCAGGTTGATCGTCTCATCACCGGCAGATTATCAGCACTTAATGCTTTTGTTGCTCAAACCCTCACTAAGTATACTGAGGTTCAGGCTAGCAGGAAGCTAGCACAGCAAAAGGTTAATGAGTGCGTCAAATCGCAATCTCAGCGTTATGGTTTTTGTGGTGGTGATGGCGAGCACATTTTCTCTCTTGTACAGGCCGCACCCCAGGGCCTGCTGTTCTTACACACAGTACTTGTACCGGGTGATTTTGTAAATGTTATTGCCATCGCAGGCTTGTGCGTTAATGGTGATATTGCCTTGACTCTACGTGAGCCTGGCTTAGTCTTGTTTACGCATGAACTTCAAACTCATACTGCGACGGAATATTTTGTTTCATCGCGACGTATGTTTGAACCTAGAAAACCTACCGTTAGTGATTTTGTTCAAATTCAGAGTTGTGTGGTCACCTATGTCAATCTGACTAGCGACCAACTACCAGATGTAATCCCAGATTACGTCGATGTTAACAAAACACTTGATGAGATTTTAGCTTCTCTGCCCAATAGAACTGGTCCAAATCTTCCTCTAGATGTTTTTAATGCCACTTATCTTAATCTCACTGGTGAAATTGCAGATTTAGAGCAGCGTTCAGAGTCTCTCCGTAATACTACAGAAGAGCTCCGAAGTCTTATATATAATATCAACAACACACTTGTTGACCTTGAGTGGCTCAACCGAGTTGAGACTTATATCAAGTGGCCGTGGTGGGTTTGGTTGATTGTTTTTATTGTTCTCATCTTTGTTGTGTCATTATTAGTGTTCTGCTGCATTTCCACGGGTTGTTGTGGATGCTGCGGTTGCTGCGGTGCTTGTTTTTCAGGTTGTTGTAGGGGTCCTAGACTTCAACCTTACGAAGCTTTTGAAAAGGTCCACGTGCAGTGA |