| Protein Id: ABJ51939.1 |
Length: 1383 aa |
| Description: spike Porcine epidemic diarrhea virus. |
Molecule type: linear |
| Data category: VRL |
Date: 15-Oct-06 |
| Source: Porcine epidemic diarrhea virus (PEDV) |
| Class virus: Coronaviridae |
Virus name: Porcine epidemic diarrhea virus |
| Host: pig |
Authors: Ge;J. and Li;Y. |
| Title: Cloning and sequence analysis of the spike gene of porcine epidemic diarrhea virus LJB/03 |
Journal: Unpublished |
| Taxonomy: Porcine epidemic diarrhea virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus. |
| db_xref: """taxon:28295, CDD:279880, CDD:279881""" |
| Sequence: MKSLTYFWLFLPVFSTLSLPQDVTRCQSTINFRRFFSKFNVQAPAVVVLGGYLPSMNSSSWYCGTGLETASGVHGIFLSYIDSGQGFEIGISQEPFDPSGYQLYLHKATNGNTNAIARLRICQFPNNKTLGPAVNDVTTGRNCLFNKAIPAHMQDGKNIVVGITWDNDRVTVFADKIYHFYLKNDWSRVATRCYNKRSCAMQYVYTPTYYMLNVTSAGEDGIYYEPCTANCSGYAANVFATDSNGHIPEGLSFNNWFLLSNDSTLLHGKVVSNQPLLVNCLLAIPKIYGLGQFFSFNQTMYGVCNGAAAQRAPEALRFNINDTSVILAEGSIVLHTALGTNLSFVCSNSSDPHLATFAIPLGATQVPYYCFLKVDTYNSTVYKFLAVLPPTVREIVITKYGDVYVNGFGYLHLGLLDAVTINFTGHGTDDDVSGFWTIASTNFVDALIEVQGTAIQRILYCDDPVSQLKCSQVAFDLDDGFYPISSRNLLSHEQPISFVTLPSFNDHSFVNITVSASFGGHSGANLIASDTTINGFSSFCVDTRQFTISLFYNVTNSYGYVSKSQDSNCPFTLQSVNDYLSFSKFCVSTSLLASACTIDLFGYPEFGSGVKFTSLYFQFTKGELITGTPKPLEGVTDVSFMTLDVCTKYTIYGFKGEGIITLTNSSFLAGVYYTSDSGQLLAFKNVTSGAVYSVTPCSFSEQAAYVDDDIVGVISSLSSSTFNSTRELPGFFYHSNDGSNCTEPVLVYSNIGVCKSGSIGYVPSQSGQVKIAPTVTGNISIPTNFSMSIRTEYLQLYNTPVSVDCATYVCNGNSRCKQLLTQYTAACKTIESALQLSARLESVEVNSMLTISEEALQLATVSSFNGDGYNFTNVLGVSVYDPASDRVVQKRSFIEDLLFNKVVTNGLGTVDEDYKRCSNGRPVADLVCAQYYSGVMVLPGVVDAEKLHMYSASLIGGMVLGGFTAAAALPFSYAVQARLNEIALQTDVLQRNQQLLAESFNSAIGNITSAFESVKEAISHTSKGLNTVAHALTKVQEVVNSQGAALTQLTVQLQHNFQAISSSIDDIYSRLDSLSADVQVGRLITGRLSVLNAFVAQTLTKYTEVQASRKLAQQKVNERVKSQSQRYGFCGGDGEHIFSLVQAAPQGLLFLHTVLVPGDFVDVIAIAGLCVNDEIALTLREPGLVLFTHELQNYTATEYFVSSRRMFEPRKPTVSDFVQIESCVVTYVNLTRDQLPDVIPDYIDVNKTLDEILASLPNRTGPSLPLDAFNATYLNLTGEIADLEQRSESLRNTLEELQSLIYNINNTLVDLEWLNRVETYIKWPWWVWLIIFIVLISVVSLLVFCCISTGCCGCCGCCGACFSGCCRGPRLQPYEAFEKVHVQ |
Nucleotide
| Nucleotide_Id: DQ985739.1 |
Length: 4152bp |
| Description: Porcine epidemic diarrhea virus spike gene; complete cds |
Source: Porcine epidemic diarrhea virus (PEDV) |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 15-Oct-06 |
| Class virus: Coronaviridae |
Virus name: Porcine epidemic diarrhea virus |
| CDS: DQ985739.1:38..4189 |
Host: pig |
| Authors: Ge;J. and Li;Y. |
Journal: Unpublished |
| Title: Cloning and sequence analysis of the spike gene of porcine epidemic diarrhea virus LJB/03 |
db_xref: taxon:28295 |
| Taxonomy: Porcine epidemic diarrhea virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Pedacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(4207); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(37); ExactPosition(4189); strand=1); type='CDS') |
| Sequence: ATGAAGTCTTTAACTTACTTCTGGTTGTTCTTACCAGTATTTTCAACACTCAGCCTACCACAAGATGTCACTAGGTGCCAGTCCACTATTAACTTCAGGCGGTTCTTTTCAAAATTTAATGTGCAAGCACCTGCTGTCGTTGTTTTGGGTGGTTATCTACCTAGTATGAACTCTTCTAGCTGGTACTGTGGCACAGGCCTTGAAACTGCTAGTGGCGTTCATGGTATTTTTCTTAGTTACATCGATTCTGGTCAGGGCTTTGAGATTGGCATTTCGCAAGAGCCGTTTGATCCTAGTGGTTACCAGCTTTATTTACATAAGGCCACCAATGGTAACACTAATGCTATTGCACGACTGCGTATTTGCCAGTTTCCAAATAATAAAACATTGGGCCCCGCTGTTAATGATGTTACAACAGGTCGTAACTGCCTATTCAACAAAGCTATTCCAGCTCATATGCAGGATGGGAAAAATATTGTTGTCGGCATAACATGGGACAATGATCGTGTCACTGTTTTTGCTGACAAGATCTATCATTTTTATCTTAAAAATGATTGGTCCCGCGTTGCGACAAGATGTTACAATAAAAGGAGTTGTGCTATGCAATATGTTTATACACCCACCTACTACATGCTTAATGTTACTAGTGCAGGTGAGGATGGCATTTATTATGAACCCTGTACAGCTAATTGCAGTGGTTACGCTGCCAATGTATTTGCCACTGATTCTAATGGCCATATACCAGAAGGTCTTAGTTTTAATAATTGGTTTCTTTTGTCCAATGATTCCACTTTGTTGCATGGTAAGGTGGTTTCCAACCAACCCTTGTTGGTCAATTGTCTTTTGGCCATTCCTAAGATTTATGGACTAGGCCAATTTTTCTCATTCAATCAAACGATGTATGGCGTTTGTAATGGAGCTGCTGCGCAGCGTGCACCAGAGGCTCTGAGGTTTAATATTAATGACACCTCTGTCATTCTTGCTGAAGGCTCAATTGTACTTCATACTGCTTTAGGAACAAATCTTTCTTTTGTTTGCAGTAATTCCTCAGATCCTCATTTAGCCACCTTCGCCATACCTCTGGGTGCTACCCAAGTACCCTATTATTGTTTTCTTAAAGTGGATACTTACAACTCCACTGTTTATAAATTCTTGGCTGTTTTACCTCCTACCGTCAGGGAAATTGTCATCACCAAGTATGGTGATGTTTATGTCAATGGGTTTGGCTACTTGCATCTCGGTTTGTTGGATGCTGTCACAATTAATTTCACTGGTCATGGCACTGACGATGACGTTTCAGGTTTTTGGACCATAGCATCGACTAATTTTGTTGATGCACTCATCGAAGTTCAAGGAACTGCCATTCAGCGTATTCTTTATTGTGATGATCCTGTTAGCCAACTCAAGTGTTCTCAGGTTGCTTTTGACCTTGACGATGGTTTTTACCCTATTTCTTCTAGAAACCTTCTGAGTCATGAACAGCCAATTTCTTTTGTTACTTTGCCATCGTTTAATGATCATTCTTTTGTTAACATTACTGTCTCTGCGTCCTTTGGTGGTCATAGTGGTGCCAACCTCATTGCATCTGACACTACTATCAATGGGTTTAGTTCTTTCTGTGTTGACACTAGACAATTTACCATTTCACTGTTTTATAACGTTACAAACAGTTATGGTTATGTGTCCAAATCACAGGATAGTAATTGCCCTTTCACCTTGCAATCTGTTAATGATTACCTGTCTTTTAGCAAATTTTGTGTTTCTACCAGCCTTTTGGCTAGTGCCTGTACCATAGATCTTTTTGGTTACCCTGAGTTCGGTAGTGGTGTTAAGTTTACGTCCCTTTACTTTCAATTCACAAAGGGTGAGTTGATTACTGGCACGCCTAAACCACTCGAAGGTGTCACGGACGTTTCTTTTATGACTCTGGATGTGTGTACCAAGTATACTATCTATGGCTTTAAAGGTGAGGGTATCATTACCCTTACAAATTCTAGCTTTTTGGCAGGTGTTTATTATACATCTGATTCTGGACAGTTGTTAGCCTTTAAGAATGTCACTAGTGGTGCTGTTTATTCTGTTACGCCATGTTCTTTTTCAGAGCAGGCTGCATATGTTGATGATGATATAGTGGGTGTTATTTCTAGTTTGTCTAGCTCCACTTTTAACAGTACTAGGGAGTTGCCTGGTTTCTTCTACCATTCTAATGATGGCTCTAATTGTACAGAGCCTGTGTTGGTGTATAGTAACATAGGTGTTTGTAAATCTGGCAGTATTGGCTATGTCCCATCTCAGTCTGGCCAAGTCAAGATTGCACCCACGGTTACTGGGAATATCAGTATTCCCACCAACTTTAGTATGAGTATTAGGACAGAATATTTACAGCTTTACAACACGCCTGTTAGTGTTGATTGTGCCACATATGTTTGTAATGGTAACTCTCGTTGTAAACAACTACTTACCCAGTACACTGCAGCATGTAAGACCATAGAGTCAGCATTACAACTCAGCGCTAGGCTTGAGTCTGTTGAAGTCAACTCTATGCTTACTATTTCTGAAGAGGCTCTACAGTTAGCTACCGTCAGTTCGTTTAATGGTGATGGATATAACTTTACTAATGTGCTGGGCGTTTCCGTGTACGATCCTGCAAGTGACAGGGTGGTACAAAAAAGGTCTTTTATTGAAGACCTGCTTTTTAACAAAGTGGTTACTAATGGCCTTGGTACTGTTGATGAAGACTATAAGCGCTGTTCTAATGGTCGCCCTGTGGCAGATCTAGTCTGTGCGCAGTATTACTCTGGTGTCATGGTACTACCTGGTGTTGTTGACGCTGAGAAGCTTCACATGTATAGTGCGTCTCTCATCGGTGGTATGGTGCTAGGAGGTTTTACTGCTGCAGCGGCATTGCCTTTTAGCTATGCTGTTCAAGCGAGACTCAATGAAATTGCTCTACAGACGGATGTTCTACAGCGGAACCAGCAATTGCTTGCTGAGTCTTTTAACTCTGCTATTGGTAATATAACTTCAGCCTTTGAGAGTGTTAAAGAGGCTATTAGTCATACTTCCAAGGGTTTGAACACTGTGGCACATGCGCTTACTAAGGTTCAAGAGGTTGTTAATTCGCAGGGTGCAGCTTTGACCCAACTTACCGTACAGCTGCAACACAACTTCCAAGCCATTTCTAGTTCTATTGATGACATTTACTCCCGACTGGACAGTCTTTCAGCTGATGTTCAGGTTGGCCGTCTCATCACCGGCAGATTATCAGTACTTAATGCTTTTGTTGCTCAAACCCTTACTAAGTATACTGAGGTTCAGGCTAGCAGGAAACTAGCACAGCAAAAGGTTAATGAGCGTGTTAAATCGCAATCTCAGCGTTATGGTTTTTGTGGTGGTGATGGCGAGCACATTTTCTCTCTGGTACAGGCAGCACCTCAGGGCTTGCTGTTTTTACACACAGTACTTGTACCGGGTGATTTTGTAGATGTTATTGCCATCGCTGGCTTATGCGTTAACGATGAAATTGCCTTGACTCTACGTGAGCCTGGCTTAGTCTTGTTTACGCATGAACTTCAAAATTATACTGCGACGGAATATTTTGTTTCATCGCGACGTATGTTTGAACCTAGAAAACCTACCGTTAGTGATTTTGTTCAAATTGAGAGTTGTGTGGTCACCTATGTCAATTTGACTAGAGACCAACTACCAGATGTAATCCCAGATTACATCGATGTTAACAAAACACTTGATGAGATATTAGCTTCTCTGCCCAATAGAACTGGTCCAAGTCTTCCTCTAGATGCTTTTAATGCCACTTATCTTAATCTCACTGGTGAAATTGCAGATTTAGAGCAGCGTTCAGAGTCTCTCCGTAATACTCTAGAAGAGCTCCAAAGTCTTATATATAATATCAACAACACACTTGTCGACCTTGAGTGGCTCAACCGAGTTGAGACATATATCAAGTGGCCGTGGTGGGTTTGGTTGATTATTTTCATTGTTCTCATCTCTGTTGTGTCATTACTAGTGTTCTGCTGCATTTCCACGGGTTGCTGTGGATGCTGCGGTTGCTGCGGTGCTTGTTTTTCAGGTTGTTGTAGGGGTCCTAGACTTCAACCTTACGAAGCTTTTGAAAAGGTCCACGTGCAGTGA |