| Protein Id: AAS01063.1 |
Length: 95 aa |
| Description: spike glycoprotein, partial SARS coronavirus CUHK-L2. |
Molecule type: linear |
| Data category: VRL |
Date: 10-Jun-16 |
| Source: SARS coronavirus CUHK-L2 |
| Class virus: Coronaviridae |
Virus name: SARS coronavirus |
| Host: -- |
Authors: Chim;S.S.; Tong;Y.K.; Hung;E.C.; Chiu;R.W. and Lo;Y.M. |
| Title: Genomic sequencing of a SARS coronavirus isolate that predated the Metropole Hotel case cluster in Hong Kong |
Journal: Clin Chem 50 (1); 231-233 (2004) |
| Taxonomy: SARS coronavirus CUHK-L2 Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus. |
| db_xref: """taxon:260550, CDD:279881""" |
| Sequence: IQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYVWLGFIAGLIAIVMVTILLCCMTSCCSCLKGACSCGSCCKFDEDDSEPVLKGVKLHYT |
Nucleotide
| Nucleotide_Id: AH013657.2 |
Length: 289bp |
| Description: SARS coronavirus CUHK-L2 isolate CUHK-L2; a Hong Kong isolate that antedated the Metropole Hotel case cluster orf1ab polyprotein; spike glycoprotein; orf3; orf4; and orf3 genes; partial cds; small envelope E protein; membrane glycoprotein M; orf7; orf8; orf9; orf10; and orf11 genes; complete cds; nucleocapsid protein gene; partial cds; and orf13 gene; complete cds |
Source: SARS coronavirus CUHK-L2 |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 10-Jun-16 |
| Class virus: Coronaviridae |
Virus name: SARS coronavirus |
| CDS: AH013657.2:<9093..9381 |
Host: -- |
| Authors: Chim;S.S.; Tong;Y.K.; Hung;E.C.; Chiu;R.W. and Lo;Y.M. |
Journal: Clin Chem 50 (1); 231-233 (2004) |
| Title: Genomic sequencing of a SARS coronavirus isolate that predated the Metropole Hotel case cluster in Hong Kong |
db_xref: taxon:260550 |
| Taxonomy: SARS coronavirus CUHK-L2 Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Sarbecovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(12597); strand=1); type='source'); SeqFeature(FeatureLocation(BeforePosition(0); AfterPosition(673); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(673); ExactPosition(773); strand=1); type='gap'); SeqFeature(FeatureLocation(BeforePosition(773); AfterPosition(1451); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(1451); ExactPosition(1551); strand=1); type='gap'); SeqFeature(FeatureLocation(BeforePosition(1551); AfterPosition(4629); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4629); ExactPosition(4729); strand=1); type='gap'); SeqFeature(FeatureLocation(BeforePosition(4729); AfterPosition(5418); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5418); ExactPosition(5518); strand=1); type='gap'); SeqFeature(FeatureLocation(BeforePosition(5518); AfterPosition(6195); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6195); ExactPosition(6295); strand=1); type='gap'); SeqFeature(FeatureLocation(BeforePosition(6295); AfterPosition(6972); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6972); ExactPosition(7072); strand=1); type='gap'); SeqFeature(FeatureLocation(BeforePosition(7072); AfterPosition(7749); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(7749); ExactPosition(7849); strand=1); type='gap'); SeqFeature(FeatureLocation(BeforePosition(7849); AfterPosition(8992); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8992); ExactPosition(9092); strand=1); type='gap'); SeqFeature(FeatureLocation(BeforePosition(9092); ExactPosition(9381); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(9389); AfterPosition(9417); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(9417); ExactPosition(9517); strand=1); type='gap'); SeqFeature(FeatureLocation(BeforePosition(9517); ExactPosition(9845); strand=1); type='CDS'); SeqFeature(FeatureLocation(BeforePosition(9517); ExactPosition(9784); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(9808); ExactPosition(10039); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(10089); ExactPosition(10755); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(10765); ExactPosition(10957); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(10964); ExactPosition(11333); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11329); ExactPosition(11464); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11470); ExactPosition(11590); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11555); ExactPosition(11810); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11811); AfterPosition(12597); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11821); ExactPosition(12118); strand=1); type='CDS') |
| Sequence: CATTCAAAAAGAAATTGACCGCCTCAATGAGGTCGCTAAAAATTTAAATGAATCACTCATTGACCTTCAAGAATTGGGAAAATATGAGCAATATATTAAATGGCCTTGGTATGTTTGGCTCGGCTTCATTGCTGGACTAATTGCCATCGTCATGGTTACAATCTTGCTTTGTTGCATGACTAGTTGTTGCAGTTGCCTCAAGGGTGCATGCTCTTGTGGTTCTTGCTGCAAGTTTGATGAGGATGACTCTGAGCCAGTTCTCAAGGGTGTCAAATTACATTACACATAA |