| Protein Id: AAL89745.1 |
Length: 789 aa |
| Description: spike glycoprotein, partial Transmissible gastroenteritis virus. |
Molecule type: linear |
| Data category: VRL |
Date: 26-Jul-16 |
| Source: Transmissible gastroenteritis virus |
| Class virus: Coronaviridae |
Virus name: Transmissible gastroenteritis virus |
| Host: -- |
Authors: Kim;S.J.; Han;J.H. and Kwon;H.M. |
| Title: Partial sequence of the spike glycoprotein gene of transmissible gastroenteritis viruses isolated in Korea |
Journal: Vet Microbiol 94 (3); 195-206 (2003) |
| Taxonomy: Transmissible gastroenteritis virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| db_xref: """taxon:11149, CDD:279880""" |
| Sequence: MKKLFVVLVVMPLIYGDNFPCSKLTNRTIGNHWNLIETFLLNYSSRLPPNSDVVLGDYFPTVQPWFNCIRNDSNDLYVTLENLKALYWDYATENITWNHRQRFHVVVNGYPYSITVTTTRDFNSAEGAIICICKGSPPTTTTESSLTSNWGSECRLNHKFPICPSNSEANCGNMLYGLQWFADEVVAYLHGASYRISFENQWSGTVTLGDMRATTLEVAGTLVDLWWFNPVYDFSYYRVNNKNGTTVVSNCTDQCASYVANVFTTQPGGYIPSDFSFNNWFLLTNSSTLVSGKLVTKQPLLVNCLWPVPSFEEAASTFCFEGAGFDQCNGAVLNNTVDVIRFNLNFTTNVQSGKGATVFSLNTTGGVTLDISCYKDTVSDSSFFSYGEIPFGVTDGPRYCHILYNGTALKYIGILPPSVKEIAISKWGHFYINGHNFFSTLPIDCISFNLTTGDSDVFWTIAYTSYTEALVQVENTAITKVTYCNSYVNNIKCSQLTANLNNGFYPVSSSEVGLVNKSVVLLPSFYTHTIVNITIGLGMKRSGYGQPIASTLSNITLPMQDNKTDVYCIRSDQFSVYVHSTCKSALWDNIFKRNCTDVLHATAVIKTGTCPFSFDKLTNYLTFNKFCLSLSPVGANCKFDVAARTRSNVQVVRSLYVIYEEGDNIVGVPSDNSGLHDLSVLHLDSCTDYNIYGRTGVGIIRRTNRTLLSGLYYTSLSGDLLGFKNVSDGVIYSVTPCDVSAQAAVIDGTIVGAITSINSELLGLTHWTTTPNFYYYSIYNYTNDRTRGT |
Nucleotide
| Nucleotide_Id: AF481366.1 |
Length: 2366bp |
| Description: Transmissible gastroenteritis virus strain HKT2 spike glycoprotein (S) gene; partial cds |
Source: Transmissible gastroenteritis virus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 26-Jul-16 |
| Class virus: Coronaviridae |
Virus name: Transmissible gastroenteritis virus |
| CDS: AF481366.1:1..>2366 |
Host: -- |
| Authors: Kim;S.J.; Han;J.H. and Kwon;H.M. |
Journal: Vet Microbiol 94 (3); 195-206 (2003) |
| Title: Partial sequence of the spike glycoprotein gene of transmissible gastroenteritis viruses isolated in Korea |
db_xref: taxon:11149 |
| Taxonomy: Transmissible gastroenteritis virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(2366); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(0); AfterPosition(2366); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(0); AfterPosition(2366); strand=1); type='CDS') |
| Sequence: ATGAAAAAACTATTTGTGGTTTTGGTTGTAATGCCATTGATTTATGGAGACAATTTTCCTTGTTCTAAATTGACTAATAGAACTATAGGTAACCATTGGAATCTCATTGAAACCTTCCTTCTAAATTATAGTAGTAGGTTACCACCTAATTCAGATGTGGTGTTAGGTGATTATTTTCCTACTGTACAACCTTGGTTTAATTGCATTCGCAATGATAGTAATGACCTTTATGTTACACTGGAAAATCTTAAAGCATTGTATTGGGATTATGCTACAGAAAATATCACTTGGAATCACAGACAACGGTTTCACGTAGTCGTTAATGGATACCCATATTCCATCACAGTTACAACAACCCGCGATTTTAATTCTGCTGAAGGTGCTATTATATGCATTTGTAAGGGCTCACCACCTACTACCACCACAGAATCTAGTTTGACTTCCAATTGGGGTAGTGAGTGCAGGTTAAACCATAAGTTCCCTATATGTCCTTCTAATTCAGAGGCAAATTGTGGTAATATGCTGTATGGCCTACAATGGTTTGCAGATGAGGTTGTTGCTTATTTACATGGTGCTAGTTACCGTATTAGTTTTGAAAATCAATGGTCTGGCACTGTCACACTTGGTGATATGCGTGCGACAACATTAGAGGTCGCTGGCACGCTTGTAGACCTTTGGTGGTTTAATCCTGTTTATGATTTTAGTTATTATAGAGTTAATAATAAAAATGGTACTACCGTAGTTTCCAATTGCACTGATCAATGTGCTAGTTATGTGGCTAATGTTTTTACTACACAGCCAGGAGGTTACATACCATCAGATTTTAGTTTTAATAATTGGTTCCTTCTAACTAATAGCTCCACGTTGGTTAGTGGTAAATTAGTTACCAAACAGCCGTTATTAGTTAATTGCTTATGGCCAGTCCCTAGCTTTGAAGAAGCAGCTTCTACATTTTGTTTTGAGGGTGCTGGCTTTGATCAATGTAATGGTGCTGTTTTAAATAACACTGTAGACGTCATTAGGTTCAACCTTAATTTTACTACAAATGTACAATCAGGTAAGGGTGCCACAGTGTTTTCATTGAACACAACGGGTGGTGTCACTCTTGACATCTCATGTTATAAGGATACAGTGAGTGACTCGAGCTTTTTCAGTTACGGTGAAATTCCGTTCGGCGTAACTGATGGTCCACGGTACTGTCACATACTCTACAATGGCACAGCTCTTAAGTATATAGGAATATTACCACCTAGTGTCAAGGAGATTGCTATTAGTAAGTGGGGCCATTTTTATATTAATGGTCACAATTTCTTTAGCACACTTCCTATTGATTGTATATCTTTTAATTTGACCACTGGTGATAGTGACGTTTTCTGGACAATAGCTTACACATCGTACACTGAAGCATTAGTACAAGTTGAAAACACAGCTATTACAAAGGTGACGTATTGTAATAGTTACGTTAATAACATTAAATGCTCTCAACTTACTGCTAATTTGAATAATGGATTTTATCCTGTTTCTTCAAGTGAAGTTGGTCTTGTCAATAAGAGTGTTGTGTTACTACCTAGCTTTTACACACATACCATTGTTAACATAACTATTGGTCTTGGTATGAAGCGTAGTGGTTATGGTCAACCCATAGCCTCGACATTAAGTAACATCACACTACCAATGCAGGATAACAAAACCGATGTGTACTGTATTCGTTCTGACCAATTTTCAGTTTATGTTCATTCTACTTGCAAAAGTGCTTTATGGGACAATATTTTTAAGCGAAACTGCACGGACGTTTTACATGCCACAGCTGTTATAAAAACTGGTACTTGTCCTTTCTCATTTGATAAATTGACCAATTACTTAACTTTTAACAAGTTCTGTTTGTCGTTGAGTCCTGTTGGTGCTAATTGTAAGTTTGATGTAGCTGCCCGTACAAGAAGCAATGTGCAGGTTGTTAGAAGTTTGTATGTAATATATGAAGAAGGAGACAACATAGTGGGTGTACCGTCTGATAATAGTGGTTTGCACGATTTGTCAGTGCTACACCTAGATTCCTGCACAGATTACAATATATATGGTAGAACTGGTGTTGGTATTATTAGACGTACTAACAGGACGCTACTTAGTGGCTTATATTACACATCACTATCAGGTGATTTGTTAGGTTTTAAAAATGTTAGTGATGGTGTCATCTACTCTGTAACGCCATGTGATGTAAGCGCACAAGCAGCTGTTATTGATGGTACCATAGTTGGGGCTATCACTTCCATTAACAGTGAACTGTTAGGTCTAACACATTGGACAACAACACCTAATTTTTATTACTACTCTATATATAATTACACAAATGATAGGACTCGTGGCAC |