| Protein Id: ABC72414.1 |
Length: 1449 aa |
| Description: spike protein Transmissible gastroenteritis virus. |
Molecule type: linear |
| Data category: VRL |
Date: 26-Jul-16 |
| Source: Transmissible gastroenteritis virus |
| Class virus: Coronaviridae |
Virus name: Transmissible gastroenteritis virus |
| Host: chicken |
Authors: Cheng;J.; Liu;J.-X. and Wu;R. |
| Title: Cloning and Structural Characterization Analysis on Spike Glycoprotein Gene of Porcine Transmissible Gastroenteritis Virus |
Journal: Zhongguo Shouyi Ke-ji 34; 3-11 (2004) |
| Taxonomy: Transmissible gastroenteritis virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| db_xref: """taxon:11149, CDD:279880, CDD:279881""" |
| Sequence: MKKLFVVLVVMPLIYGDNFPCSKLTNRTIGNHWNLIETFLLNYSSRLSPNSDVVLGDYFPTVQPWFNGIRNNSNDLYVTLENLKALYWDYATENITWNHKQRLNVVVNGYPYSITVTTTRNFNSAEGAIICICKGSPPTTTTESSLTCNWGSECRLNHKFPICPSNSEANCGNMLYGLQWFADAVVAYLHGASYRISFENQWSGTVTLGDMRATTLETAGTLVDLWWFNPVYDVSYYRVNNKNGTTVVSNCTDQCASYVANVFTTQPGGFIPSDFSFNNWFLLTNSSTLVSGKLVTKQPLLVNCLWPVPSFEEAASTFCFEGAGFDQCNGAVLNNTVDVIRFNLNFTTNVQSGKGATVFSLNTTGGVTLEISCYNDTVSDSSFSSYGEMPFGVTDGPRYCYVLYNGTALKYLGTLPPIVKEIAISKWGHFYINGYNFFSTFPIDCISFNLTTGDSDVFWTIAYTSYTEALVQVENTAITKVTYCNSYVNNIKCSQLTANLNNGFYPVSSSEVGLVNKSVVLLPSFYTHTIVNITIGLGMKRSGYGQPIASTLSNITLPMQDNNTDVYCIRSDQFSVYVHSTCKSSLWDNVFKRNCTDVLDATAVIKTGTCPFSFDKLNNYLTFNKFCLSLSPVGANCKFDVAARTRTNDQVVRSLYVIYEEGDNIVGVPSDNSGLHDLSVLHLDSCTDYNIYGRTGVGIIRQTNRTLLSGLYYTSLSGDLLGFKNVSDGVIYSVTPCDVSAQAAVIDGTIVGAITSINSELLGLTHWTTTPNFYYYSIYNYTNDRTRGTAIDSNDVDCEPVITYSNIGVCKNGALVFINVTHSDGDVQPISTGNVTIPTNFTISVQVEYIQVYTTPVSIDCSRYVCNGNPRCNKLLTQYVSACQTIEQALAMGARLENMEVDSMLFVSENALKLASVEAFNSSETLDPIYKEWPNIGGSWLEGLKYILPSDNSKRKYRSAIEDLLFAKVVTSGLGTVDEDYKRCTGGYDIADLVCAQYYNGIMVLPGVANADKMTMYTASLAGGITLGALGGGAVAIPFAVAVQARLNYVALQTDVLNKNQQILASAFNQAIGNITQSFGKVNDAIHQTSRGLATVAKALAKVQDVVNTQGQALSHLTVQLQNNFQAISSSISDIYNRLDELSADAQVDRLITGRLTALNAFVSQTLTRQAEVRASRQLAKDKVNECVRSQSQRFGFCGNGTHLFSLANVAPNGMIFFHTVLLPTAYETVTAWAGICALDGDRTFGLVVKDVQLTLFRNLDDKFYLTPRTMYQPRVATSSDFVQIEGCDVLFVNATVSDLPSIIPDYIDINQTVQDILENFRPNWTVPELTFDIFNATYLNLTGEIDDLEFRSEKLHNTTVELAILIDNINNTLVNLEWLNRIETYVKWPWYVWLLIGLVVIFCIPLLLFCCCSTGCCGCIGCLGSCCHSICSRRQFENYEPIEKVHVH |
Nucleotide
| Nucleotide_Id: DQ201447.1 |
Length: 4350bp |
| Description: Transmissible gastroenteritis virus strain TS; complete genome |
Source: Transmissible gastroenteritis virus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 26-Jul-16 |
| Class virus: Coronaviridae |
Virus name: Transmissible gastroenteritis virus |
| CDS: DQ201447.1:20365..24714 |
Host: chicken |
| Authors: Cheng;J.; Liu;J.-X. and Wu;R. |
Journal: Zhongguo Shouyi Ke-ji 34; 3-11 (2004) |
| Title: Cloning and Structural Characterization Analysis on Spike Glycoprotein Gene of Porcine Transmissible Gastroenteritis Virus |
db_xref: taxon:11149 |
| Taxonomy: Transmissible gastroenteritis virus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Alphacoronavirus; Tegacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(28548); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(314); ExactPosition(12368); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(314); ExactPosition(12368); strand=1); type='CDS'); SeqFeature(FeatureLocation(BeforePosition(12331); ExactPosition(20368); strand=1); type='gene'); SeqFeature(FeatureLocation(BeforePosition(12331); ExactPosition(20368); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(12331); ExactPosition(12338); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(20364); ExactPosition(24714); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20364); ExactPosition(24714); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24816); ExactPosition(25035); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24816); ExactPosition(25035); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25096); ExactPosition(25831); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25096); ExactPosition(25831); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25817); ExactPosition(26066); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25817); ExactPosition(26066); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26076); ExactPosition(26865); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26076); ExactPosition(26865); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26877); ExactPosition(28026); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26877); ExactPosition(28026); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28031); ExactPosition(28268); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28031); ExactPosition(28268); strand=1); type='CDS') |
| Sequence: ATGAAAAAATTATTTGTGGTTTTGGTTGTAATGCCATTGATTTATGGAGACAATTTTCCTTGTTCTAAATTGACTAATAGAACTATAGGTAACCATTGGAATCTCATTGAAACCTTCCTTCTAAATTATAGTAGTAGGTTATCACCTAATTCAGATGTGGTGTTAGGTGATTATTTTCCTACTGTACAACCTTGGTTTAATGGCATTCGCAATAATAGTAATGACCTTTATGTTACATTGGAAAATCTTAAAGCATTGTATTGGGATTATGCTACAGAAAATATCACTTGGAATCACAAACAACGGTTAAACGTAGTCGTTAATGGATACCCATACTCCATCACAGTTACAACAACCCGCAATTTTAATTCTGCTGAAGGTGCTATTATATGCATTTGCAAGGGCTCACCACCTACTACCACCACAGAATCTAGTTTGACTTGCAATTGGGGTAGTGAGTGCAGGTTAAACCATAAGTTCCCTATATGTCCTTCTAATTCAGAGGCAAATTGTGGTAATATGCTGTATGGCCTACAATGGTTTGCAGATGCGGTTGTTGCTTATTTACATGGTGCTAGTTACCGTATTAGTTTTGAAAATCAATGGTCTGGCACTGTTACACTTGGTGATATGCGTGCGACTACATTAGAAACCGCTGGCACGCTTGTAGACCTTTGGTGGTTTAATCCTGTTTATGATGTCAGTTATTATAGAGTTAATAATAAAAATGGTACTACCGTAGTTTCCAATTGCACTGATCAATGTGCTAGTTATGTGGCTAATGTTTTTACTACACAGCCAGGAGGCTTTATACCATCAGATTTTAGTTTTAATAATTGGTTCCTTCTAACTAATAGCTCCACGTTGGTTAGTGGTAAATTAGTTACCAAACAGCCGTTATTAGTTAATTGCTTATGGCCAGTCCCTAGCTTTGAAGAAGCAGCTTCTACATTTTGTTTTGAAGGTGCTGGCTTTGATCAATGTAATGGTGCTGTTTTAAATAACACTGTAGACGTCATCAGGTTTAACCTTAATTTTACTACAAATGTACAATCAGGTAAGGGTGCCACAGTGTTTTCATTGAACACAACGGGTGGTGTCACTCTTGAAATCTCATGTTATAATGATACAGTGAGTGACTCGAGCTTTTCCAGTTACGGTGAAATGCCGTTCGGCGTAACTGATGGACCACGGTACTGTTACGTACTCTATAATGGCACAGCTCTTAAGTATCTAGGAACATTACCACCTATTGTCAAGGAGATTGCTATTAGTAAGTGGGGCCATTTTTATATTAATGGTTACAATTTCTTTAGCACATTTCCTATTGATTGTATATCTTTTAATTTGACCACTGGTGATAGTGACGTTTTCTGGACAATAGCTTACACATCGTACACTGAAGCATTAGTACAAGTTGAAAACACAGCTATTACAAAGGTGACGTATTGTAATAGTTACGTTAATAACATTAAATGCTCTCAACTTACTGCTAATTTGAATAATGGATTTTATCCTGTTTCTTCAAGTGAAGTTGGTCTTGTCAATAAGAGTGTTGTGTTACTACCTAGCTTTTACACACATACCATTGTTAACATAACTATTGGTCTTGGTATGAAGCGTAGTGGTTATGGTCAACCCATAGCCTCAACATTAAGTAACATTACACTACCAATGCAGGATAACAACACCGATGTGTACTGTATTCGTTCTGACCAATTTTCAGTTTATGTTCATTCTACTTGCAAAAGTTCTTTATGGGACAATGTTTTTAAGCGAAACTGCACGGACGTTTTAGATGCCACAGCTGTTATAAAAACTGGTACTTGTCCTTTCTCATTTGATAAATTGAACAATTACTTAACTTTTAACAAGTTCTGTTTGTCGTTGAGTCCTGTTGGTGCTAATTGTAAGTTTGATGTAGCTGCCCGTACAAGAACCAATGATCAGGTTGTTAGAAGTTTGTATGTAATATATGAAGAAGGAGACAACATAGTGGGTGTACCGTCTGATAATAGTGGTTTACACGATTTGTCAGTGCTACACCTAGATTCCTGCACAGATTACAATATATATGGTAGAACTGGTGTTGGTATTATTAGACAAACTAACAGGACGCTACTTAGTGGCTTATATTACACATCACTATCAGGTGATTTGTTAGGTTTTAAAAATGTTAGTGATGGTGTCATCTACTCTGTAACGCCATGTGATGTAAGCGCACAAGCAGCTGTTATTGATGGTACCATAGTTGGGGCTATCACTTCCATTAACAGTGAACTGTTAGGTCTAACACATTGGACAACAACACCTAATTTTTATTACTACTCTATATATAATTACACAAATGATAGGACTCGTGGCACTGCAATTGACAGTAATGATGTTGATTGTGAACCTGTCATAACCTATTCTAACATAGGTGTTTGTAAAAATGGTGCTTTGGTTTTTATTAACGTCACACATTCTGATGGAGACGTGCAACCAATTAGCACTGGTAACGTCACGATACCTACAAACTTTACTATATCCGTGCAAGTCGAATATATTCAGGTTTACACTACACCAGTGTCAATAGACTGTTCAAGATATGTTTGTAATGGCAACCCTAGGTGTAACAAATTGTTAACACAATACGTTTCTGCATGTCAAACTATTGAGCAAGCACTTGCAATGGGTGCCAGACTTGAAAACATGGAAGTTGATTCCATGTTATTTGTTTCTGAAAATGCCCTTAAATTGGCTTCTGTCGAAGCATTCAATAGTTCAGAAACTTTAGATCCTATTTACAAAGAATGGCCTAATATAGGTGGCTCTTGGCTAGAAGGTCTAAAATACATACTTCCGTCCGATAATAGCAAACGTAAGTATCGTTCAGCTATAGAGGACTTGCTTTTTGCTAAGGTTGTAACATCTGGTTTAGGTACAGTTGATGAAGATTATAAACGTTGTACAGGTGGTTATGACATAGCTGACTTAGTATGTGCTCAATACTACAATGGCATCATGGTGCTACCTGGTGTGGCTAATGCTGACAAAATGACTATGTACACAGCATCCCTCGCAGGTGGTATAACATTAGGTGCACTTGGTGGAGGCGCCGTGGCTATACCTTTTGCAGTAGCAGTTCAGGCTAGACTTAATTATGTTGCTCTACAAACTGATGTATTGAACAAAAACCAGCAGATCCTGGCTAGTGCTTTCAATCAAGCTATTGGTAACATTACACAGTCATTTGGTAAGGTTAATGATGCTATACATCAAACATCACGAGGTCTTGCAACTGTTGCTAAAGCATTGGCAAAAGTGCAAGATGTTGTCAACACACAAGGGCAAGCTTTAAGCCACCTAACAGTACAATTGCAAAATAATTTCCAAGCCATTAGTAGTTCTATTAGTGACATTTATAATAGGCTTGATGAATTGAGTGCTGATGCACAAGTTGACAGGCTGATCACAGGAAGACTTACAGCACTTAATGCATTTGTGTCTCAGACTCTAACCAGACAAGCCGAGGTTAGGGCTAGTAGACAACTTGCCAAAGACAAGGTTAATGAATGCGTTAGGTCTCAGTCTCAGAGATTCGGATTCTGTGGTAATGGTACACATTTGTTTTCACTCGCAAATGTAGCACCAAATGGCATGATCTTCTTTCACACAGTGCTATTACCAACGGCTTATGAAACTGTGACTGCTTGGGCAGGTATTTGTGCTTTAGATGGTGATCGCACTTTTGGACTTGTCGTTAAAGATGTCCAGTTGACTTTGTTTCGTAATCTAGATGACAAGTTCTATTTGACCCCCAGAACTATGTATCAGCCTAGAGTGGCAACTAGTTCTGATTTTGTTCAAATTGAAGGGTGCGATGTGCTGTTTGTTAATGCAACTGTAAGTGATTTGCCTAGTATTATACCTGATTATATTGATATTAATCAGACTGTTCAAGACATATTAGAAAATTTTAGACCAAATTGGACTGTACCTGAGTTGACATTTGACATTTTTAACGCAACCTATTTAAACCTGACTGGTGAAATTGATGACTTAGAATTTAGGTCAGAAAAGCTACATAACACTACTGTAGAACTTGCCATTCTTATTGACAACATTAACAATACATTAGTCAATCTTGAATGGCTCAATAGAATTGAAACCTATGTAAAATGGCCTTGGTATGTGTGGCTACTAATAGGCTTAGTAGTAATATTTTGCATACCATTACTGCTATTTTGCTGTTGTAGTACAGGTTGCTGTGGATGCATAGGTTGTTTAGGAAGTTGTTGTCACTCTATATGCAGTAGAAGACAATTTGAAAATTACGAACCTATTGAAAAAGTGCACGTCCATTAA |