| Protein Id: ABW75125.1 |
Length: 1203 aa |
| Description: spike Turkey coronavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 18-Jul-08 |
| Source: Turkey coronavirus |
| Class virus: Coronaviridae |
Virus name: Turkey coronavirus |
| Host: embryonated turkey eggs (21 day) |
Authors: Cao;J.; Wu;C.C. and Lin;T.L. |
| Title: Complete nucleotide sequence of polyprotein gene 1 and genome organization of turkey coronavirus |
Journal: Virus Res 136 (1-2); 43-49 (2008) |
| Taxonomy: Turkey coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| db_xref: """taxon:11152, CDD:279880, CDD:279881""" |
| Sequence: MVAPLCCLTIILSLACNVSSIPTICNNATVGSGECVPCTDIPEYAHGKNGGEALDFYSPDVMRPPDGAYIQSGYYEPLFTGCFNQTNQTDSTCANGLYRGSPGNFTIQGDFLENYDAIGIMFWWGLGTKVGHHDPTFNLTWGNFFLNSKNFTSFPKVKSVIFIATGDIFVNGVLMGVYNLNFTQTLTIWLAQCVGTMKVVILRNSNALVQFSAGNVVDFEPCTGDTTINKLRCAYQQFNFSTGFYDIDTFVPVTSNITYLPYPDLKDNTGQEVYDFYVALKGDSVSYNQSCVDSNYPFFKLKCNNTYLWDQDKLCILGSEIYVPGYKVYTQHSYAGTIPNYPACSSKGLSLENIYKNIGFNRFCVTKLLETRDISSITQYTCVYVVSVEGFDSYNWGIIYRYVGVNFDFGTAMYSVKSAPMQFIYTEQCHNYNIYNIRGVGQILNVTGKDNTTLVDGGLAITSGSGLLAFRNNGSLYSVQPCQTVSTQAVIVNGSFVGLFLPASCRLAGQFGLGNHTEYVDGGCLISNKTSTRERRSTNAVYTGECTGLFAAMGTSCIYSNGTVLNRTLPQPSVQTSVQPLLGVVANVSIPKELTLAVTTEYLQTRYQKVTIDCAKYVCGDSIRCRTLLQQYGSFCQSVNAILSGVNENEDNGLLQYAEAINTGYTLNFTGYNVSNLGGFDLSLVLPKNLTLLQNQGRSTIEDLLFDKVVTLGVSEVDQNYDKCIASRGGSFTNLADLTCAQFYNGVMVLPGVVDPGLMAVYTGSLIGGMALGGITAAASIPFATQLQARVNYLALTQSVLLDNQNLIANSFNKVLKGIQSALDTVSQGFVEVARGFESVTVALNKVQDVVNTHSDILNKLMAQLSVNFGAVSSSLNEIYLKLGQINADAQVDRLITGRLTALSTYVASLQLAAYKADQSRRLALQKVEECVKSQSMRYGFCGNGSHVLTIPQSAPNGIFFIHYTYQPTAYVTIEAVPGLCVTTPSGKYGVMPKTGSGIIFRQNGTFFVTSTQLYEPKLLSYSEVVNLTSCEANYYNVSESETPFQPALPNFDDEFNDIFTDLNISKDAIKNISSNFNYTIPILDLQGEICRLNHSINTLYNYSDVIDKINQGLNDTFINLEQLNKITRYIKWPWYVWLAIGSACLIFILILGWVFFMTGCCGCCCGCFGIIPLMSKCGKKSSYYTTFDNDVVYEQNRPKKSV |
Nucleotide
| Nucleotide_Id: EU022525.1 |
Length: 3612bp |
| Description: Turkey coronavirus isolate TCoV-540; complete genome |
Source: Turkey coronavirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 18-Jul-08 |
| Class virus: Coronaviridae |
Virus name: Turkey coronavirus |
| CDS: EU022525.1:20352..23963 |
Host: embryonated turkey eggs (21 day) |
| Authors: Cao;J.; Wu;C.C. and Lin;T.L. |
Journal: Virus Res 136 (1-2); 43-49 (2008) |
| Title: Complete nucleotide sequence of polyprotein gene 1 and genome organization of turkey coronavirus |
db_xref: taxon:11152 |
| Taxonomy: Turkey coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(27771); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(530); ExactPosition(20401); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(530); ExactPosition(12338); strand=1); FeatureLocation(ExactPosition(12337); ExactPosition(20401); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(530); ExactPosition(12368); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(20351); ExactPosition(23963); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20351); ExactPosition(23963); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(23962); ExactPosition(24610); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(23962); ExactPosition(24136); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24135); ExactPosition(24330); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24310); ExactPosition(24610); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24609); ExactPosition(25654); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24609); ExactPosition(25278); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25278); ExactPosition(25563); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25483); ExactPosition(25654); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25637); ExactPosition(26074); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25637); ExactPosition(25835); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25831); ExactPosition(26074); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26016); ExactPosition(27246); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26016); ExactPosition(27246); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27254); ExactPosition(27476); strand=1); type='CDS') |
| Sequence: ATGGTGGCGCCGTTGTGCTGCTTGACGATAATCTTGTCACTTGCATGTAATGTGAGTTCTATTCCCACAATTTGTAACAATGCTACTGTAGGTAGTGGTGAGTGTGTACCTTGCACAGACATACCAGAGTATGCACATGGTAAAAATGGGGGTGAAGCTCTAGATTTTTATAGTCCAGATGTTATGAGACCGCCAGATGGTGCATATATACAATCCGGTTATTATGAACCACTTTTCACAGGTTGCTTTAATCAAACTAATCAAACTGATAGCACCTGTGCAAATGGACTTTATAGAGGGTCGCCAGGTAATTTTACTATACAAGGTGATTTTCTTGAAAATTATGATGCTATTGGCATAATGTTTTGGTGGGGTCTAGGTACTAAAGTGGGTCATCACGATCCCACTTTTAATTTAACATGGGGCAACTTTTTTCTTAATTCTAAGAATTTTACAAGTTTCCCTAAAGTTAAAAGTGTTATATTCATTGCCACTGGAGATATTTTCGTAAATGGCGTTTTAATGGGTGTTTATAATCTAAATTTTACGCAAACCTTAACAATTTGGTTAGCACAGTGTGTTGGCACAATGAAGGTTGTTATTTTACGTAATAGTAATGCTCTAGTTCAGTTTTCAGCTGGCAACGTAGTTGATTTTGAACCCTGTACAGGAGACACTACTATTAATAAGTTACGTTGTGCTTATCAGCAATTTAATTTTTCTACGGGATTTTATGACATAGATACTTTTGTACCTGTGACATCTAATATTACATATTTACCTTACCCAGATTTAAAAGATAATACTGGTCAAGAGGTATATGATTTTTATGTAGCTCTTAAAGGAGATTCTGTTAGTTATAATCAAAGTTGTGTAGACTCTAACTACCCATTCTTTAAATTAAAGTGTAATAATACTTATCTATGGGATCAGGATAAGTTGTGTATATTAGGGTCTGAAATATATGTGCCGGGGTATAAGGTTTATACGCAACATTCATATGCTGGCACTATACCGAATTACCCAGCTTGTTCTTCCAAAGGTCTTAGTTTGGAAAATATTTATAAGAATATAGGTTTCAATAGATTTTGTGTAACTAAATTGTTGGAGACTCGTGATATATCATCTATAACCCAATACACTTGTGTTTATGTCGTTAGTGTAGAAGGTTTTGATAGTTATAATTGGGGTATTATATACAGGTATGTTGGTGTAAACTTTGATTTTGGTACAGCTATGTATAGTGTGAAAAGTGCACCTATGCAGTTCATCTATACAGAGCAATGTCATAATTATAATATTTACAACATAAGAGGTGTTGGTCAAATATTAAATGTCACTGGTAAAGATAATACTACACTTGTAGACGGTGGTCTAGCAATAACTAGTGGCAGTGGTTTATTGGCCTTTCGTAATAATGGAAGTCTTTATAGTGTACAACCGTGCCAGACAGTTTCAACTCAAGCTGTAATTGTTAACGGGAGTTTTGTAGGCTTGTTTCTTCCTGCATCTTGTAGGTTAGCCGGACAATTTGGTCTAGGTAACCACACAGAATATGTAGATGGTGGTTGTCTTATTAGTAATAAGACTAGTACTAGAGAGCGTAGGTCTACTAACGCTGTTTATACTGGTGAATGCACAGGTTTATTTGCAGCTATGGGTACATCTTGTATTTATAGTAATGGCACAGTTCTTAATAGAACATTACCACAACCATCTGTTCAAACTAGTGTGCAACCATTACTAGGTGTTGTGGCAAATGTGTCTATTCCAAAAGAATTGACACTTGCTGTAACCACAGAATACTTACAAACTCGTTATCAGAAAGTTACTATTGATTGTGCTAAGTATGTCTGTGGTGATTCTATAAGATGCCGCACTCTGCTGCAGCAGTATGGTTCTTTTTGCCAGAGTGTTAATGCTATATTAAGTGGTGTTAATGAGAATGAAGATAATGGTTTACTGCAATATGCGGAAGCTATTAATACGGGTTACACACTTAATTTTACTGGTTATAATGTATCTAATTTGGGTGGGTTTGATTTGTCGCTTGTTCTACCCAAAAACCTCACTCTGTTACAAAATCAAGGTAGGTCTACTATTGAAGACTTACTTTTTGACAAAGTTGTTACTCTAGGTGTTAGTGAAGTTGATCAGAATTATGATAAATGTATAGCATCTAGAGGCGGTTCTTTTACTAATTTAGCAGATTTAACTTGTGCTCAGTTTTACAATGGCGTGATGGTGCTCCCTGGTGTTGTTGATCCTGGCCTAATGGCGGTGTACACCGGTTCTTTAATAGGTGGTATGGCGCTTGGAGGCATTACAGCAGCGGCATCCATACCATTTGCTACTCAACTACAAGCACGTGTCAATTATTTAGCGTTGACACAATCGGTGCTTTTAGATAACCAAAATTTGATAGCAAATTCTTTTAATAAAGTCCTTAAAGGTATACAGTCAGCACTAGACACTGTGTCCCAGGGATTTGTTGAAGTAGCTAGAGGTTTTGAGAGTGTAACTGTAGCACTTAATAAAGTCCAGGATGTAGTTAATACACATTCTGACATATTAAATAAACTTATGGCTCAGCTTAGTGTTAATTTTGGTGCTGTTTCATCTTCTCTTAATGAGATATACCTAAAATTAGGCCAGATTAATGCAGATGCTCAGGTTGATAGGTTAATTACTGGTAGGTTGACTGCATTATCAACTTACGTAGCATCCCTTCAATTAGCAGCTTATAAGGCTGATCAGTCAAGACGCTTGGCTCTACAGAAAGTAGAGGAGTGTGTTAAATCGCAATCTATGCGATATGGTTTCTGTGGCAATGGTAGCCATGTTCTAACAATACCACAGAGTGCTCCTAATGGAATATTCTTCATCCACTACACGTACCAACCCACTGCTTATGTTACTATTGAAGCAGTGCCTGGTCTATGTGTAACAACACCTTCTGGAAAGTATGGTGTAATGCCCAAGACTGGAAGTGGCATCATATTTAGACAGAATGGTACTTTCTTTGTCACTTCTACACAGTTATATGAGCCTAAGCTTTTATCATATTCAGAAGTGGTTAATTTAACATCTTGTGAAGCTAATTATTACAATGTTAGTGAAAGTGAAACACCCTTTCAACCAGCATTGCCTAATTTCGATGATGAGTTTAATGACATTTTTACTGATTTAAATATCTCAAAAGATGCCATTAAAAATATCAGTTCCAATTTTAACTACACAATTCCCATCCTAGATCTTCAGGGTGAGATTTGTAGATTGAACCATTCCATTAACACACTATATAATTATAGTGATGTTATTGACAAAATTAACCAGGGTCTTAATGACACCTTTATTAATCTTGAACAACTTAATAAAATTACACGTTACATTAAGTGGCCTTGGTATGTTTGGTTAGCAATTGGTTCTGCTTGTTTAATATTCATCTTAATATTAGGATGGGTTTTTTTCATGACTGGTTGTTGTGGTTGTTGTTGTGGATGCTTTGGCATTATTCCGCTAATGAGTAAGTGTGGTAAGAAATCCTCTTACTACACGACCTTTGATAATGATGTGGTGTATGAACAAAACAGACCTAAAAAGTCTGTTTAA |