| Protein Id: ABW75138.1 |
Length: 1203 aa |
| Description: spike Turkey coronavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 18-Jul-08 |
| Source: Turkey coronavirus |
| Class virus: Coronaviridae |
Virus name: Turkey coronavirus |
| Host: embryonated turkey eggs (21 day) |
Authors: Cao;J.; Wu;C.C. and Lin;T.L. |
| Title: Complete nucleotide sequence of polyprotein gene 1 and genome organization of turkey coronavirus |
Journal: Virus Res 136 (1-2); 43-49 (2008) |
| Taxonomy: Turkey coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| db_xref: """taxon:11152, CDD:279880, CDD:279881, CDD:223910""" |
| Sequence: MLAPLCCLTIILSLVCNVSPIPTICNNVTVGSGKCISCTTIPEYADGKNGGEALDFYSPDVMRPPDGAYIQSGYYEPLFTGCFNQTYQNDTTCRNGLHAGSPGNFTIQGDFLKNYDAIGLMFWWGLSMGNSTPLFNLTWGDFFLASRNFTGFPKVKRIIFIGTGDIFVNGVLMGMYNLNFTQTLTIWLAQCVGTMKIVILRNSNALVQFSAGNVVDFEPCTGATTINKLRCSYQQFNFSTGFYDIDTFVPVTSNITYLPYPDLIDNTGQEVEDFYVALKGDAVSYNQSCVDSKYSFFKLKCNNTYSWDSDKLCILGSELYVPGYNVYTNTQHSYAGTIPNYPTCSSKGLSLANIYNSIGFNRFCATKLFETRDISSITQYTCVYVVSVEGYDSYNMGLKYRYVGINFDFGTAMYSVKSAPTQFIYTEQCHNYNIYNIRGVGQILNVTGKDNTTLVDGGLAITSGSGLLAFRNNGSLFSVQPCQTVSTQAVIVNGSFVGLFVPASCGLASQFNLGNHTEYVDGGCLISNKTTTRRRRATSAVYTGECIGLFASMGTSCIYSNGTVLNRTLPQPSVQTSVQPLLGVVANVSIPKELTLAVTTEYLQTRYQKVTIDCAKYVCGDSTRCRTLLQQYGSFCQSVNAILSGVNENEDNGLLQYAEAINTGYTLNFTGYNVSNLGGFDLSLVLPKNLTLVQNQGRSTIEDLLFDKVVTLGVSEVDQNYDKCIASRGGSFTNLADLTCAQFYNGVMVLPGVVDPGLMAVYTGSLIGGMALGGITAAASIPFATQIQARVNYLALTQSVLLDNQNLIANSFNKALKGIQSALDTVSEGFHEVARGFESVTVALNKVQDVVNTHSDILNKLMAQLSVNFGAVSSSLNEIYLKLDQLNADAQVDRLITGRLTALSTYVASLQLAAYKADQSRRLALQKVEECVKSQSMRYGFCGNGSHVLTIPQSAPNGIFFIHYTYQPTSYITIEAVPGLCVTTPSGKYGVMPKTGSGIIFRQNGTFFVTSTQLYEPKLLSYSEVVNLTSCEANYYNVSESETPFQPALPNFDEEFNDIFTELNTSKDAINNISSNFNYTIPILNLQDEICRLNDSINTLYNYSDVIDKINQELNDTFINLEQLDKVTRYIKWPWYVWLAIGFAFVIFILILGWVFFMTGCCGCCCGCFGIIPLMSKCGKKSSYYTTFDNDVVTEQNRPKKSV |
Nucleotide
| Nucleotide_Id: EU022526.1 |
Length: 3612bp |
| Description: Turkey coronavirus isolate TCoV-ATCC; complete genome |
Source: Turkey coronavirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 18-Jul-08 |
| Class virus: Coronaviridae |
Virus name: Turkey coronavirus |
| CDS: EU022526.1:20392..24003 |
Host: embryonated turkey eggs (21 day) |
| Authors: Cao;J.; Wu;C.C. and Lin;T.L. |
Journal: Virus Res 136 (1-2); 43-49 (2008) |
| Title: Complete nucleotide sequence of polyprotein gene 1 and genome organization of turkey coronavirus |
db_xref: taxon:11152 |
| Taxonomy: Turkey coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(27854); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(27854); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(528); ExactPosition(12372); strand=1); FeatureLocation(ExactPosition(12371); ExactPosition(20441); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(528); ExactPosition(20401); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(528); ExactPosition(12402); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(20351); ExactPosition(24003); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20391); ExactPosition(24003); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(23962); ExactPosition(24662); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24002); ExactPosition(24176); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24175); ExactPosition(24370); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24350); ExactPosition(24662); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24609); ExactPosition(25687); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24651); ExactPosition(25323); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25323); ExactPosition(25608); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25528); ExactPosition(25687); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25637); ExactPosition(26126); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25683); ExactPosition(25881); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25877); ExactPosition(26126); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26016); ExactPosition(27298); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26068); ExactPosition(27298); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27306); ExactPosition(27531); strand=1); type='CDS') |
| Sequence: ATGTTGGCGCCGTTGTGCTGCCTGACGATAATCTTGTCACTTGTATGTAATGTGAGTCCCATTCCCACAATTTGTAATAATGTTACTGTAGGTAGTGGTAAATGTATATCTTGTACAACCATACCAGAGTATGCTGATGGTAAAAATGGGGGTGAGGCCTTAGATTTTTATAGTCCAGATGTTATGAGACCGCCAGATGGTGCATATATACAATCTGGTTATTATGAACCACTTTTTACAGGTTGTTTTAATCAAACTTATCAAAATGATACCACCTGTAGAAATGGGCTCCATGCGGGGTCACCAGGTAATTTTACTATACAGGGTGACTTTCTTAAAAATTATGATGCTATTGGCTTAATGTTTTGGTGGGGCCTAAGTATGGGTAATAGTACGCCTCTATTTAACTTAACATGGGGTGACTTTTTTCTTGCTTCTAGGAACTTTACAGGTTTCCCTAAAGTTAAAAGGATTATATTCATTGGCACTGGGGATATTTTTGTGAATGGTGTGCTAATGGGTATGTATAACTTAAATTTTACACAAACCTTAACAATTTGGTTGGCGCAGTGTGTTGGCACAATGAAGATTGTTATTTTACGTAATAGTAATGCTCTAGTTCAATTTTCAGCTGGTAATGTTGTTGATTTTGAACCCTGCACAGGAGCCACTACTATTAATAAGTTACGTTGCTCTTATCAGCAATTTAATTTTTCTACAGGATTCTATGACATAGATACTTTTGTACCTGTGACATCTAATATTACATATTTACCTTACCCAGATTTAATAGACAATACTGGTCAAGAGGTAGAAGACTTTTACGTAGCTCTTAAAGGAGACGCTGTTAGTTACAATCAAAGTTGTGTAGACTCTAAGTACTCTTTCTTTAAATTAAAGTGTAATAATACTTATAGTTGGGATTCTGATAAGTTGTGTATATTAGGGTCTGAATTATATGTGCCAGGGTATAATGTTTATACTAATACGCAACATTCATATGCTGGCACTATACCGAATTATCCAACTTGTTCTTCCAAAGGTCTTAGTTTGGCAAATATTTATAATAGTATAGGTTTCAATAGATTTTGTGCAACCAAACTGTTTGAGACTCGTGATATATCATCTATAACCCAATACACTTGTGTTTATGTTGTTAGTGTAGAGGGTTATGATAGTTATAATATGGGTCTTAAGTATCGTTATGTTGGTATAAATTTTGATTTTGGCACAGCTATGTATAGTGTGAAAAGTGCCCCTACACAGTTCATCTATACAGAGCAATGTCATAATTACAATATTTACAACATAAGAGGTGTTGGTCAAATATTAAATGTCACTGGTAAAGATAATACCACACTTGTAGATGGTGGTTTAGCAATAACTAGTGGCAGTGGATTATTGGCCTTTCGTAATAATGGAAGTCTTTTTAGTGTACAACCTTGCCAGACAGTTTCAACTCAAGCTGTAATTGTCAATGGGAGTTTTGTAGGCTTGTTTGTTCCTGCATCTTGTGGATTAGCTAGTCAATTTAATTTAGGTAACCACACAGAGTATGTAGACGGTGGTTGTTTGATTAGTAATAAGACTACTACTAGAAGGCGTAGGGCTACTAGTGCTGTTTATACTGGTGAATGCATAGGTTTATTTGCATCTATGGGTACATCTTGTATTTATAGTAATGGCACAGTTCTTAATAGAACATTACCACAACCATCTGTTCAAACTAGTGTGCAACCATTACTAGGTGTTGTAGCAAATGTGTCTATTCCAAAAGAATTGACACTTGCTGTTACCACAGAATATTTACAAACTCGTTACCAGAAAGTTACTATTGATTGTGCTAAATATGTCTGTGGTGATTCTACAAGGTGCCGCACTCTGCTGCAGCAGTATGGTTCTTTTTGTCAGAGTGTTAATGCTATATTAAGTGGTGTTAATGAGAATGAAGATAATGGTTTACTGCAATATGCGGAAGCTATTAACACAGGTTACACACTTAATTTTACTGGTTATAATGTATCTAATTTGGGTGGGTTTGATTTGTCTCTTGTTCTACCCAAAAATCTTACTTTGGTACAAAATCAAGGTAGGTCTACTATTGAAGACTTACTTTTTGACAAAGTTGTTACTCTAGGTGTTAGTGAAGTCGATCAGAATTATGATAAATGTATAGCATCTAGAGGTGGTTCTTTTACTAATTTAGCAGATTTAACTTGTGCTCAGTTTTATAATGGTGTCATGGTGCTCCCTGGTGTTGTTGATCCTGGTCTAATGGCAGTGTACACCGGCTCTTTAATAGGTGGTATGGCGCTTGGAGGCATTACAGCAGCGGCATCCATACCATTTGCTACCCAGATACAAGCACGTGTCAATTATTTAGCGTTGACACAATCAGTGCTTTTAGATAATCAAAATTTGATAGCAAATTCTTTTAATAAGGCTCTTAAAGGTATACAGTCAGCATTAGATACTGTGTCCGAGGGATTTCATGAAGTAGCTAGAGGTTTTGAGAGTGTAACTGTAGCACTTAATAAAGTTCAGGATGTAGTTAATACACATTCTGATATATTAAATAAACTTATGGCTCAGCTTAGTGTTAATTTTGGGGCTGTTTCATCTTCTCTGAATGAGATATACCTAAAATTAGACCAGCTTAATGCAGATGCTCAGGTTGATAGGTTGATTACTGGTAGGTTGACTGCATTATCAACTTATGTAGCATCCCTTCAATTAGCAGCTTATAAGGCTGATCAGTCAAGACGCTTGGCTCTACAGAAAGTAGAGGAGTGTGTTAAGTCGCAATCCATGCGATATGGTTTCTGTGGTAATGGTAGTCATGTTCTAACGATACCACAGAGTGCTCCTAATGGAATATTCTTCATTCATTACACGTACCAACCCACTTCTTATATCACAATTGAAGCAGTGCCTGGTCTATGTGTTACAACACCTTCTGGAAAGTATGGTGTAATGCCCAAGACTGGCAGTGGCATCATATTTAGACAGAATGGTACTTTCTTTGTTACTTCCACACAGTTATATGAGCCTAAGCTTTTATCATATTCAGAAGTGGTTAATTTAACCTCTTGTGAAGCTAATTATTACAATGTTAGTGAAAGTGAAACACCCTTTCAACCAGCATTGCCTAACTTTGATGAAGAGTTTAATGACATTTTTACTGAGTTAAATACCTCAAAAGATGCCATTAACAATATCAGTTCCAATTTTAATTACACAATTCCCATCCTAAATCTTCAGGATGAGATTTGTAGATTGAATGATTCTATTAACACACTATATAATTATAGTGATGTTATTGATAAAATTAACCAAGAGCTTAATGACACCTTTATTAATCTTGAACAACTTGATAAAGTTACACGTTACATTAAGTGGCCTTGGTATGTTTGGTTAGCAATTGGTTTTGCTTTTGTAATATTCATCTTAATATTAGGATGGGTGTTTTTCATGACTGGTTGTTGTGGTTGTTGTTGTGGATGCTTTGGCATTATTCCTCTAATGAGTAAGTGTGGTAAGAAATCTTCTTACTACACGACTTTTGATAATGATGTGGTAACTGAACAAAACAGACCTAAAAAGTCTGTTTAA |