| Protein Id: ABW81427.1 |
Length: 1226 aa |
| Description: spike protein Turkey coronavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 15-Jun-08 |
| Source: Turkey coronavirus |
| Class virus: Coronaviridae |
Virus name: Turkey coronavirus |
| Host: turkey |
Authors: Gomaa;M.H.; Barta;J.R.; Ojkic;D. and Yoo;D. |
| Title: Complete genomic sequence of turkey coronavirus |
Journal: Virus Res 135 (2); 237-246 (2008) |
| Taxonomy: Turkey coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| db_xref: """taxon:11152, CDD:279880, CDD:279881, CDD:223910""" |
| Sequence: MLVQLCCLTIILSLVCNVSSIPTICLNATVGSGVCLPCTNIPEYADGKNGGEALDFYSPDVMRPPDGAYIQSGYYEPLFTGCFNQTNQTDSTCRNGLYKGSPGNFTIQGDFLKNYDAVGIMFWWGLATNVGKVTPPNDPTFNLTWGNFFLNSKNFTGFHKVKSVIFIATGDIFVNGVLMGFYNLNFTQTLTIWLAQCVGTMKVVILRNSNALVHFSAGNVVAFEPCTGDTTINKLRCAYQQFNFSTGFYDIDTFVPVTSNITYLPYPDLKDNTGQEVCDFYVALKGDHVIYNQSCVDSKYPFFKLKCNNTYSWDNDKLCILGSEIYVPGYNVYTNTQHSYAGTIPNYPTCSSKGLSLENIYNNIGFNRFCVTKLLTTRDISSITQYTCVYVVSVEGFDSYNQGIVYSYVGVNFDFGTAMYSVKTAPMQFIYTEQCHKYNIYNIRGVGQILNVTGKDNTTLVDGGLVITSGSGLLAFRNNGSLFSVQPCRTVSTQAVIVNGSFVGLFVPASCWLADQFNLGNHTEYVDGGCLISNKTISRKRRSTNAVYTGECTGLFAAMGTSCIYSNGTVLNRTLPQPSVQTSVQPLLGVVANVSIPKELTLAVTTEYLQTRYQKVTIDCAKYVCGDSTRCRTLLQQYGSFCQSVNAILSGVNENEDNGLLQYAEAINTGYTLNFTGYNVSNLGGFDLSLVLPKNLTLAQNQGRSTIEDLLFDKVVTLGVSEVDQNYDKCIASRGGSFTNLADLTCAQFYNGVMVLPGVVDPGLMAVYTGSLIGGMALGGITAAASIPFATQIQARVNYLALTQSVLLDNQNLIANSFNKALKGIQSALDTVSQGFVEVARGFESVTVALNKVQDVVNTHSDILNKLMAQLSVNFGAVSSSLNEIYLKLDQINADAQVDRLITGRLTALSTYVASLQLAAYKADQSRRLALQKVEECVKSQSMRYGFCGNGSHVLTIPQSAPNGIFFIHYTYQPTSYVTIEAVPGLCVTTPSGKYGVMPKTGSGIIFRQNDTFFVTSTQLYEPKLLSYSEVVNLTSCEANYYNVSESETPFQPALPNFDDEFNDIFTELNTSKDAIKNISSNFNYTIPILNLEDEICRLNHSINTLYNYSDVIDKINQGLNDTFINLEQLNKITRYIKWPWYVWLAIGFACLIFILILGWVFFMTGCCGCCCGCFGIIPLMSKCGKKSSYYTTFDNDVVYNKTDLKSLFNDSNSNIFSNSVNSSLV |
Nucleotide
| Nucleotide_Id: EU095850.1 |
Length: 3681bp |
| Description: Turkey coronavirus isolate MG10; complete genome |
Source: Turkey coronavirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 15-Jun-08 |
| Class virus: Coronaviridae |
Virus name: Turkey coronavirus |
| CDS: EU095850.1:20360..24040 |
Host: turkey |
| Authors: Gomaa;M.H.; Barta;J.R.; Ojkic;D. and Yoo;D. |
Journal: Virus Res 135 (2); 237-246 (2008) |
| Title: Complete genomic sequence of turkey coronavirus |
db_xref: taxon:11152 |
| Taxonomy: Turkey coronavirus Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Gammacoronavirus; Igacovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(27657); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(528); ExactPosition(20336); strand=1); type='gene'); SeqFeature(CompoundLocation(FeatureLocation(ExactPosition(528); ExactPosition(12354); strand=1); FeatureLocation(ExactPosition(12350); ExactPosition(20336); strand=1); 'join'); type='CDS'; location_operator='join'); SeqFeature(FeatureLocation(ExactPosition(528); ExactPosition(12384); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(528); ExactPosition(12384); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(20359); ExactPosition(24040); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(20359); ExactPosition(24040); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(23987); ExactPosition(24161); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(23987); ExactPosition(24161); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24160); ExactPosition(24355); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24160); ExactPosition(24355); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24335); ExactPosition(24635); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24335); ExactPosition(24635); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(24636); ExactPosition(25308); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(24636); ExactPosition(25308); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25308); ExactPosition(25593); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25308); ExactPosition(25593); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25668); ExactPosition(25866); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25668); ExactPosition(25866); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(25862); ExactPosition(26111); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(25862); ExactPosition(26111); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(26053); ExactPosition(27283); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(26053); ExactPosition(27283); strand=1); type='CDS') |
| Sequence: ATGTTGGTGCAGTTGTGTTGCCTGACGATAATCTTGTCACTTGTATGTAATGTGAGTTCTATTCCCACAATTTGTCTCAATGCTACTGTAGGTAGTGGTGTGTGTCTACCTTGCACAAACATACCAGAGTATGCAGATGGTAAAAATGGGGGTGAAGCCCTAGATTTTTATAGTCCAGATGTTATGAGACCGCCAGATGGCGCATATATACAATCCGGTTATTATGAACCACTTTTCACAGGTTGCTTTAATCAAACTAATCAAACTGATAGCACCTGTAGAAATGGGCTTTATAAAGGGTCGCCAGGTAATTTTACTATACAAGGTGATTTTCTTAAAAATTATGATGCTGTTGGCATAATGTTTTGGTGGGGTTTAGCTACTAATGTGGGTAAAGTAACACCACCCAATGATCCTACTTTTAATTTAACATGGGGCAACTTTTTTCTTAATTCTAAGAATTTTACAGGTTTCCATAAAGTTAAAAGTGTCATATTTATTGCCACTGGAGATATCTTCGTAAATGGCGTTTTAATGGGTTTTTATAATCTAAATTTTACACAAACCTTAACAATTTGGTTAGCACAGTGTGTTGGCACAATGAAGGTTGTTATTTTACGTAATAGTAATGCTCTAGTTCATTTTTCGGCTGGCAACGTAGTTGCTTTCGAACCCTGCACAGGAGACACTACTATTAATAAGTTACGTTGCGCTTATCAGCAATTTAATTTTTCTACAGGATTTTATGACATAGATACTTTTGTACCTGTGACATCTAATATTACATATTTACCTTACCCAGATTTAAAAGACAATACTGGTCAAGAGGTATGTGACTTTTATGTAGCTCTTAAAGGAGATCATGTTATTTACAACCAAAGTTGTGTAGACTCTAAGTACCCATTCTTTAAATTAAAGTGTAATAATACTTATTCATGGGATAATGATAAGTTGTGTATTTTAGGGTCTGAAATATATGTGCCGGGGTATAATGTTTACACTAATACGCAACATTCATATGCTGGCACTATACCGAATTATCCAACTTGTTCTTCCAAAGGTCTTAGTTTGGAAAATATTTATAATAATATAGGTTTCAATAGATTTTGTGTAACTAAATTGTTGACGACTCGTGATATATCATCTATAACCCAATACACTTGTGTTTATGTCGTTAGTGTAGAAGGTTTTGATAGTTATAATCAAGGTATTGTATACAGTTATGTTGGTGTAAACTTTGATTTTGGTACAGCTATGTATAGTGTGAAAACTGCACCTATGCAGTTCATCTATACAGAGCAATGTCATAAGTATAATATTTACAACATAAGAGGTGTTGGTCAAATATTAAATGTCACTGGTAAAGATAATACTACACTTGTAGACGGTGGTCTAGTAATAACTAGTGGCAGTGGCTTATTGGCTTTTCGTAATAATGGAAGTCTTTTTAGTGTACAACCTTGCCGGACAGTTTCAACTCAAGCTGTAATTGTTAATGGGAGTTTTGTAGGCTTGTTTGTTCCTGCATCTTGTTGGTTAGCCGATCAATTTAATCTAGGTAACCACACAGAATATGTAGATGGTGGTTGTCTTATTAGTAATAAGACTATTAGTAGAAAGCGTAGGTCTACTAACGCTGTTTATACTGGTGAATGCACAGGTTTATTTGCAGCTATGGGTACATCTTGTATTTATAGTAATGGCACAGTTCTTAATAGAACATTACCACAACCATCTGTTCAAACTAGTGTGCAACCATTACTAGGTGTTGTAGCAAATGTGTCTATTCCAAAAGAATTGACACTTGCTGTAACCACAGAATACTTACAAACTCGTTATCAGAAAGTTACTATTGATTGTGCTAAATATGTCTGTGGTGATTCTACAAGGTGCCGCACGTTGCTGCAGCAGTATGGTTCTTTTTGCCAGAGTGTTAATGCTATATTAAGTGGTGTTAATGAGAATGAAGATAATGGTTTACTGCAATATGCGGAAGCTATTAATACAGGTTACACACTTAATTTTACTGGTTATAATGTATCCAATTTGGGTGGGTTTGATTTGTCCCTTGTTCTACCCAAAAATCTTACTTTGGCACAAAATCAAGGTAGGTCTACTATTGAAGACTTACTTTTTGACAAAGTTGTTACTCTAGGTGTTAGTGAAGTTGATCAGAATTATGATAAATGTATAGCATCTAGAGGTGGTTCTTTTACTAATTTAGCAGATTTAACTTGTGCTCAGTTTTACAATGGTGTCATGGTGCTCCCTGGTGTTGTTGACCCTGGTCTAATGGCAGTGTACACCGGCTCTTTAATAGGTGGTATGGCGCTCGGAGGCATTACAGCAGCGGCATCCATACCATTTGCTACTCAAATACAAGCACGTGTCAATTATTTAGCGTTGACACAATCAGTGCTTTTAGATAACCAAAATTTGATAGCAAATTCCTTTAATAAGGCCCTTAAAGGTATACAGTCAGCATTAGACACTGTTTCCCAGGGGTTTGTTGAAGTAGCTAGAGGTTTTGAGAGCGTAACTGTAGCACTTAATAAAGTTCAGGATGTGGTTAACACACATTCCGACATATTAAATAAACTTATGGCTCAGCTTAGTGTTAATTTTGGGGCTGTTTCATCTTCTCTTAATGAGATATACCTAAAATTAGACCAGATTAATGCAGATGCTCAGGTTGATAGGTTAATTACTGGTAGGTTGACTGCATTATCAACTTACGTAGCATCTCTTCAATTAGCAGCTTATAAGGCTGACCAGTCAAGACGCTTGGCTCTACAGAAAGTAGAGGAGTGTGTTAAGTCGCAATCCATGCGATATGGTTTCTGTGGTAATGGTAGCCATGTTCTAACAATACCACAGAGTGCTCCTAATGGAATATTCTTTATCCACTACACGTACCAACCCACTTCTTATGTTACAATTGAAGCAGTGCCTGGTCTATGTGTAACAACACCTTCTGGAAAGTATGGTGTAATGCCCAAGACTGGAAGTGGCATCATATTTAGACAGAATGATACTTTCTTTGTCACTTCCACACAGTTATATGAGCCTAAGCTTTTATCATATTCAGAAGTGGTCAATTTAACATCTTGTGAAGCTAATTATTACAATGTTAGTGAAAGTGAAACACCCTTTCAACCAGCATTGCCTAATTTCGATGACGAGTTTAATGACATTTTTACTGAGTTAAATACCTCAAAAGATGCCATTAAAAATATCAGTTCCAATTTTAACTACACAATTCCCATCCTAAATCTTGAGGATGAGATTTGTAGATTGAATCACTCCATTAACACACTATATAATTATAGTGATGTTATTGATAAAATTAACCAGGGTCTTAATGACACCTTTATTAATCTTGAACAACTTAATAAAATTACACGTTACATTAAGTGGCCTTGGTATGTTTGGTTAGCAATTGGTTTTGCTTGTTTAATATTCATCTTAATATTAGGATGGGTGTTTTTCATGACTGGTTGTTGTGGTTGTTGTTGCGGATGCTTTGGCATTATTCCGCTAATGAGTAAGTGTGGTAAGAAATCCTCTTACTACACGACTTTTGATAATGATGTGGTGTATAACAAAACAGACCTAAAAAGTCTGTTTAATGATTCAAACTCCAACATCTTTTCTAATAGTGTTAATTCTTCTTTGGTTTAA |