| Protein Id: AAR11463.1 |
Length: 676 aa |
| Description: virion spike glycoprotein precursor Sudan ebolavirus. |
Molecule type: linear |
| Data category: VRL |
Date: 29-Mar-04 |
| Source: Sudan ebolavirus |
| Class virus: ebolavirus |
Virus name: Sudan ebolavirus |
| Host: -- |
Authors: Towner;J.S.; Rollin;P.E.; Bausch;D.G.; Sanchez;A.; Crary;S.M.; Vincent;M.; Lee;W.F.; Spiropoulou;C.F.; Ksiazek;T.G.; Lukwiya;M.; Kaducu;F.; Downing;R. and Nichol;S.T. |
| Title: Rapid Diagnosis of Ebola Hemorrhagic Fever by Reverse Transcription-PCR in an Outbreak Setting and Assessment of Patient Viral Load as a Predictor of Outcome |
Journal: J Virol 78 (8); 4330-4341 (2004) |
| Taxonomy: Sudan ebolavirus Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Filoviridae; Ebolavirus. |
| db_xref: """taxon:186540, CDD:279888, CDD:317697, CDD:197367, CDD:197367, CDD:197367, CDD:197367, CDD:197367, CDD:197367, CDD:197367, CDD:197367, CDD:197367, CDD:197367, CDD:197367""" |
| Sequence: MGGLSLLQLPRDKFRKSSFFVWVIILFQKAFSMPLGVVTNSTLEVTEIDQLVCKDHLASTDQLKSVGLNLEGSGVSTDIPSATKRWGFRSGVPPKVVSYEAGEWAENCYNLEIKKPDGSECLPPPPDGVRGFPRCRYVHKAQGTGPCPGDYAFHKDGAFFLYDRLASTVIYRGVNFAEGVIAFLILAKPKETFLQSPPIREAVNYTENTSSYYATSYLEYEIENFGAQHSTTLFKIDNNTFVRLDRPHTPQFLFQLNDTIHLHQQLSNTTGRLIWTLDANINADIGEWAFWENKKNLSEQLRGEELSFEALSLNETEDDDAASSRITKGRISDRATRKYSDLVPKNSPGMVPLHIPEGETTLPSQNSTEGRRVGVNTQETITETAATIIGTNGNHMQISTIGIRPSSSQIPSSSPTTAPSPEAQTPTTHTSGPSVMATEEPTTPPGSSPGPTTEAPTLTTPENITTAVKTVLPQESTSNGLITSTVTGILGSLGLRKRSRRQTNTKATGKCNPNLHYWTAQEQHNAAGIAWIPYFGPGAEGIYTEGLMHNQNALVCGLRQLANETTQALQLFLRATTELRTYTILNRKAIDFLLRRWGGTCRILGPDCCIEPHDWTKNITDKINQIIHDFIDNPLPNQDNDDNWWTGWRQWIPAGIGITGIIIAIIALLCVCKLLC |
Nucleotide
| Nucleotide_Id: AY344234.1 |
Length: 2030bp |
| Description: Sudan ebolavirus strain Gulu virion spike glycoprotein precursor (GP) and small/secreted glycoprotein (SGP) genes; complete cds |
Source: Sudan ebolavirus |
| Nucleotide_type: RNA |
Molecule type: linear |
| Data category: VRL |
Date: 29-Mar-04 |
| Class virus: ebolavirus |
Virus name: Sudan ebolavirus |
| CDS: AY344234.1:75..2104 |
Host: -- |
| Authors: Towner;J.S.; Rollin;P.E.; Bausch;D.G.; Sanchez;A.; Crary;S.M.; Vincent;M.; Lee;W.F.; Spiropoulou;C.F.; Ksiazek;T.G.; Lukwiya;M.; Kaducu;F.; Downing;R. and Nichol;S.T. |
Journal: J Virol 78 (8); 4330-4341 (2004) |
| Title: Rapid Diagnosis of Ebola Hemorrhagic Fever by Reverse Transcription-PCR in an Outbreak Setting and Assessment of Patient Viral Load as a Predictor of Outcome |
db_xref: taxon:186540 |
| Taxonomy: Sudan ebolavirus Viruses; Riboviria; Orthornavirae; Negarnaviricota; Haploviricotina; Monjiviricetes; Mononegavirales; Filoviridae; Ebolavirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(2261); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(74); ExactPosition(2104); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(74); ExactPosition(2104); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(74); ExactPosition(1193); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(74); ExactPosition(1193); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(953); ExactPosition(960); strand=1); type='misc_feature') |
| Sequence: ATGGGGGGTCTTAGCCTACTCCAATTGCCCAGGGACAAATTTCGGAAAAGCTCTTTCTTTGTTTGGGTCATCATCTTATTCCAAAAGGCCTTTTCCATGCCTTTGGGTGTTGTGACTAACAGCACTTTAGAAGTAACAGAGATTGACCAGCTAGTCTGCAAGGATCATCTTGCATCTACTGACCAGCTGAAATCAGTTGGTCTCAACCTCGAGGGGAGCGGAGTATCTACTGATATCCCATCTGCAACAAAGCGTTGGGGCTTCAGATCTGGTGTTCCTCCCAAGGTGGTCAGCTATGAAGCGGGAGAATGGGCTGAAAATTGCTACAATCTTGAAATAAAGAAGCCGGACGGGAGCGAATGCTTACCCCCACCGCCAGATGGTGTCAGAGGCTTTCCAAGGTGCCGCTATGTTCACAAAGCCCAAGGAACCGGGCCCTGCCCAGGTGACTACGCCTTTCACAAGGATGGAGCTTTCTTCCTCTATGACAGGCTGGCTTCAACTGTAATTTACAGAGGAGTCAATTTTGCTGAGGGGGTAATTGCATTCTTGATATTGGCTAAACCAAAAGAAACGTTCCTTCAGTCACCCCCCATTCGAGAGGCAGTAAACTACACTGAAAATACATCAAGTTATTATGCCACATCCTACTTGGAGTATGAAATCGAAAATTTTGGTGCTCAACACTCCACGACCCTTTTCAAAATTGACAATAATACTTTTGTTCGTCTGGACAGGCCCCACACGCCTCAGTTCCTTTTCCAGCTGAATGATACCATTCACCTTCACCAACAGTTGAGTAATACAACTGGGAGACTAATTTGGACACTAGATGCTAATATCAATGCTGATATTGGTGAATGGGCTTTTTGGGAAAATAAAAAAATCTCTCCGAACAACTACGTGGAGAAGAGCTGTCTTTCGAAGCTTTATCGCTCAACGAGACAGAAGACGATGATGCGGCATCGTCGAGAATTACAAAGGGAAGAATCTCCGACCGGGCCACCAGGAAGTATTCGGACCTGGTTCCAAAGAATTCCCCTGGGATGGTTCCATTGCACATACCAGAAGGGGAAACAACATTGCCGTCTCAGAATTCGACAGAAGGTCGAAGAGTAGGTGTGAACACTCAGGAGACCATTACAGAGACAGCTGCAACAATTATAGGCACTAACGGCAACCATATGCAGATCTCCACCATCGGGATAAGACCGAGCTCCAGCCAAATCCCGAGTTCCTCACCGACCACGGCACCAAGCCCTGAGGCTCAGACCCCCACAACCCACACATCAGGTCCATCAGTGATGGCCACCGAGGAACCAACAACACCACCGGGAAGCTCCCCCGGCCCAACAACAGAAGCACCCACTCTCACCACCCCAGAAAATATAACAACAGCGGTTAAAACTGTCCTGCCACAGGAGTCCACAAGCAACGGTCTAATAACTTCAACAGTAACAGGGATTCTTGGGAGTCTTGGGCTTCGAAAACGCAGCAGAAGACAAACTAACACCAAAGCCACGGGTAAGTGCAATCCCAACTTACACTACTGGACTGCACAAGAACAACATAATGCTGCTGGGATTGCCTGGATCCCGTACTTTGGACCGGGTGCGGAAGGCATATACACTGAAGGCCTGATGCATAACCAAAATGCCTTAGTCTGTGGACTTAGGCAACTTGCAAATGAAACAACTCAAGCTCTGCAGCTTTTCTTAAGAGCCACAACGGAGCTGCGGACATATACCATACTCAATAGGAAGGCCATAGATTTCCTTCTGCGACGATGGGGCGGGACATGCAGGATCCTGGGACCAGATTGTTGCATTGAGCCACATGATTGGACAAAAAACATCACTGATAAAATCAACCAAATCATCCATGATTTCATCGACAACCCCTTACCTAATCAGGATAATGATGATAATTGGTGGACGGGCTGGAGACAGTGGATCCCTGCAGGAATAGGCATTACTGGAATTATTATTGCAATTATTGCTCTTCTTTGCGTTTGCAAGCTGCTTTGCTGA |