| Protein Id: AAF68923.1 |
Length: 1361 aa |
| Description: spike glycoprotein precursor Murine hepatitis virus strain ML-11. |
Molecule type: linear |
| Data category: VRL |
Date: 3-Jan-02 |
| Source: Murine hepatitis virus strain ML-11 |
| Class virus: hepatitis virus |
Virus name: Murine hepatitis virus |
| Host: -- |
Authors: Das Sarma;J.; Fu;L.; Hingley;S.T.; Lai;M.M. and Lavi;E. |
| Title: Sequence analysis of the S gene of recombinant MHV-2/A59 coronaviruses reveals three candidate mutations associated with demyelination and hepatitis |
Journal: J Neurovirol 7 (5); 432-436 (2001) |
| Taxonomy: Murine hepatitis virus strain ML-11 Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus. |
| db_xref: """taxon:123595, CDD:293060, CDD:286493, CDD:279881""" |
| Sequence: MLFVFLTLLPSSLGYIGDFRCIQLVNTDTSNASAPSVSTEVVDVSKGIGTYYVLDRVYLNATLLLTGYYPVDGSMYRNMALTGINTISLNWYKPPFLSEFNDGIFAKVKNLKASLPKDSISYFPTIIIGSNFVTTSYTVVLEPYNGIIMASICQYTICQLPYTDCKPNTGGNKLIGFWHTELKSPVCILKRNFTFNVNAEWLYFHFYQQGGTFYAYYADVSSATTFLFSMYIGDVLTQYFVLPYMCTLTTTGVFSPQYWVTPLVKRQYLFNFNQKGIITSAVDCASSYTSEIKCKTQSMNPNTGVYDLSGYTVQPVGLVYRRVRNLPDCKIEEWLTAKSVPSPLNWERKTFQNCNFDLSSLLRFVQAESLSCSNIDASKVYGMCFGSISIDKFAIPNRRRVDLQLGNSGFLQSFNYKIDTRATSCQLYYSLAKNNVTVNNHNPSSWNRRYGFNDVATFGTGKHDVAYAEACFTVGASYCPCANPSIVSPCTTGKPNFANCPTGTSNRECTVMPLANNQFKCDCTCNPSPLTTYDLRCLQARSMLGVGDHCEGLGVLEDKCGGSNTCNCSAHAFVGWAKDSCLANGRCHIFSNLMLNGINSGTTCSMDLQLPNTEVVTGVCVKYDLYGITGQGIFKEVKADYYHSWQNLLYDVNGNLIGFRDFVANKSYTIRSCYSGRVSAAYHQDAPEPALLYRNLKCDYVFNNNISREETPLNYFDSYLGCVVNADNSTEEAVDACDLRMGSGLCVNYSTSHRARSSVSTGYKLTTFEPFTVRIVNDSVESVDGLYELQIPTNFTIASHQEFVQTRSPKVTIDCAAFVCGGHTACRQQLVEYGSFCDNINAILGEVNNLIDTMQLQVASALIQGVTLSSRLSDGIGGQIDDINFSPLLGCLGSDCGEVTMAAQTGRSAIEDVLFDKVKLSDVGFVEAYNNCTGGQEVRDLLCVQSFNGIKVLPPVLSENQISGYTAGATVSAMFPWSAAAGVPFSLSVQYRINGLGVTMNVLSENQKMIASAFNNAIGAIQEGFAATNSALAKMQFVVNANAEALNNLLNQLSNRFGAISASLQEILSRLDALEAQAQIDRLINGRLTALNAYVSKQLSDMTLVKVSAAQAIEKVNECVKSQSSRINFCGNGNHILSLVQNAPYGLYFIHFSYVPTSFTTANVSPGLCISGDRGLAPKAGYFVQDDGEWKFTGSNYYYPEPITDKNSVVMSSCAANYTKAPEVFLNTSIPNLPDFKEELDKWFKNQTSIAPDLSLDFEKLNVTLLDLTDEMNRIQDAIKKLNESYINLKDVGTYEMYVKWPWYVWLLIGLAGVAVCVLLFFICCCTGCGSCCFKKCGNCCDECGGHQDSIVIHNISSHED |
Nucleotide
| Nucleotide_Id: AF207902.1 |
Length: 4086bp |
| Description: Murine hepatitis virus strain ML-11 RNA-directed RNA polymerase (orf1A); RNA-directed RNA polymerase (orf1B); non-structural protein (orf2A); hemagglutinin esterase protein (orf2B); spike glycoprotein precursor (orf3); non-structural protein (orf5A); envelope glycoprotein E (orf5B); matrix glycoprotein (orf6); and nucleocapsid protein (orf7) genes; complete cds |
Source: Murine hepatitis virus strain ML-11 |
| Nucleotide_type: DNA |
Molecule type: linear |
| Data category: VRL |
Date: 3-Jan-02 |
| Class virus: hepatitis virus |
Virus name: Murine hepatitis virus |
| CDS: AF207902.1:23756..27841 |
Host: -- |
| Authors: Das Sarma;J.; Fu;L.; Hingley;S.T.; Lai;M.M. and Lavi;E. |
Journal: J Neurovirol 7 (5); 432-436 (2001) |
| Title: Sequence analysis of the S gene of recombinant MHV-2/A59 coronaviruses reveals three candidate mutations associated with demyelination and hepatitis |
db_xref: taxon:123595 |
| Taxonomy: Murine hepatitis virus strain ML-11 Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Nidovirales; Cornidovirineae; Coronaviridae; Orthocoronavirinae; Betacoronavirus; Embecovirus. |
| Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(31277); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(209); ExactPosition(13460); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(209); ExactPosition(13460); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(13381); ExactPosition(21583); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(13381); ExactPosition(21583); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(21596); ExactPosition(22394); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(21596); ExactPosition(22394); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(22448); ExactPosition(22742); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(22448); ExactPosition(22742); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(23755); ExactPosition(27841); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(23755); ExactPosition(27841); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(27930); ExactPosition(27942); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(27996); ExactPosition(28041); strand=1); type='misc_feature'); SeqFeature(FeatureLocation(ExactPosition(28326); ExactPosition(28650); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28326); ExactPosition(28650); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28642); ExactPosition(28909); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28642); ExactPosition(28909); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(28905); ExactPosition(29592); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(28905); ExactPosition(29592); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(29606); ExactPosition(30962); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(29606); ExactPosition(30962); strand=1); type='CDS') |
| Sequence: ATGCTATTCGTGTTTTTAACCTTGTTGCCCTCTTCTCTAGGGTATATTGGTGATTTTAGATGTATCCAACTTGTAAATACCGACACCTCTAATGCCAGCGCTCCAAGCGTTAGTACAGAGGTAGTTGATGTTTCCAAAGGGATTGGTACTTATTATGTTTTAGATCGAGTCTATTTAAATGCCACACTATTGCTTACTGGTTATTACCCTGTAGATGGGTCCATGTATAGAAACATGGCTCTAACGGGAATTAATACCATAAGCCTTAATTGGTACAAACCACCCTTTTTATCAGAGTTTAATGATGGCATATTTGCTAAGGTAAAGAACCTTAAAGCATCTTTGCCCAAAGATTCTATTTCATATTTCCCTACTATAATTATAGGTAGTAATTTTGTCACCACTTCCTATACTGTAGTATTGGAACCGTATAATGGTATAATTATGGCATCCATTTGCCAGTATACCATTTGTCAACTACCGTACACGGATTGCAAACCGAATACGGGCGGTAATAAGTTAATTGGCTTTTGGCACACAGAGCTAAAATCCCCTGTGTGCATTTTAAAGCGTAATTTTACGTTTAATGTTAATGCCGAATGGCTTTATTTTCATTTTTACCAGCAGGGTGGTACTTTTTATGCGTATTATGCGGATGTTTCTTCTGCTACTACGTTTTTGTTTAGTATGTATATTGGTGATGTGTTAACACAATATTTTGTGTTGCCTTATATGTGTACTCTCACTACAACAGGTGTCTTTTCACCGCAGTATTGGGTTACACCTCTTGTCAAGCGCCAATATTTATTTAATTTTAATCAAAAGGGTATTATTACTAGTGCTGTTGATTGTGCTAGTAGTTATACCAGCGAAATAAAGTGTAAGACCCAAAGTATGAATCCCAATACGGGAGTTTATGATTTATCCGGTTACACCGTCCAACCTGTAGGATTAGTGTACCGGCGTGTTAGAAATTTGCCTGATTGTAAAATTGAGGAATGGCTAACTGCTAAGTCTGTACCTTCTCCTCTCAATTGGGAGCGCAAAACATTTCAAAATTGTAACTTCGACCTGAGCAGTCTATTAAGATTTGTTCAGGCTGAGTCACTCTCATGTAGTAATATAGATGCTTCCAAGGTTTATGGTATGTGCTTTGGTAGTATATCTATAGACAAGTTTGCGATACCCAATAGACGCCGAGTTGATTTGCAGCTAGGCAACTCTGGGTTTTTGCAATCCTTTAATTACAAAATAGATACAAGAGCTACTTCGTGTCAGCTCTATTATAGTCTTGCAAAAAATAATGTCACTGTCAATAACCATAACCCGTCCTCTTGGAACAGGCGTTATGGGTTCAATGATGTGGCTACATTTGGAACTGGTAAACATGACGTTGCGTATGCTGAGGCTTGTTTTACCGTGGGAGCATCATATTGCCCTTGCGCGAACCCCAGCATAGTGTCGCCATGTACCACTGGAAAACCTAACTTTGCCAATTGCCCTACAGGCACCTCGAATCGTGAGTGCACTGTTATGCCATTGGCTAATAATCAATTTAAGTGTGATTGCACTTGTAACCCTAGTCCTCTAACCACCTATGATCTTAGATGTCTCCAAGCAAGAAGCATGCTTGGCGTAGGTGATCATTGTGAAGGTCTAGGAGTTTTAGAAGATAAATGTGGTGGCAGCAACACCTGCAATTGTTCTGCTCATGCCTTTGTTGGCTGGGCTAAGGATAGTTGCTTGGCTAATGGCCGCTGTCACATTTTTAGTAATTTGATGTTAAATGGCATTAATAGTGGTACTACATGTTCCATGGATTTGCAATTGCCTAATACTGAAGTGGTCACTGGCGTCTGCGTCAAATATGACCTCTACGGTATAACAGGCCAAGGTATTTTTAAGGAGGTTAAGGCTGACTATTATCATAGTTGGCAAAACCTCTTATATGATGTTAATGGCAACTTAATCGGATTTCGCGATTTTGTTGCTAATAAGAGTTATACTATTCGAAGTTGCTATAGTGGGCGGGTCTCGGCTGCATATCATCAAGATGCACCAGAACCAGCGCTACTATATCGCAATTTAAAATGTGACTATGTCTTTAACAACAACATATCCCGTGAGGAGACACCACTTAACTATTTCGATAGTTATCTTGGTTGTGTTGTTAATGCTGACAACTCAACTGAAGAAGCTGTTGACGCGTGTGATTTGCGTATGGGTAGTGGGCTTTGTGTCAACTATTCAACGTCTCACCGCGCTCGCAGCTCTGTCAGCACGGGTTATAAATTAACTACTTTTGAACCATTTACAGTCCGCATTGTCAATGATAGTGTTGAGTCTGTTGATGGGTTATATGAGCTGCAAATACCAACCAACTTTACTATAGCTAGCCATCAGGAGTTCGTTCAAACGAGGTCTCCAAAGGTTACTATAGACTGTGCTGCATTTGTCTGTGGTGGCCACACAGCATGCCGTCAGCAGTTGGTTGAGTACGGCTCATTCTGTGATAATATTAATGCCATTCTTGGCGAGGTAAATAACCTCATAGATACTATGCAACTTCAAGTTGCAAGTGCTTTAATCCAAGGTGTCACGTTAAGCTCACGCTTATCGGATGGCATTGGTGGTCAAATAGATGATATTAATTTTAGTCCTCTGCTTGGTTGTTTAGGTTCTGACTGTGGCGAAGTTACCATGGCAGCTCAAACCGGACGATCTGCTATAGAGGATGTATTATTTGACAAAGTCAAACTCTCTGATGTTGGCTTTGTCGAAGCATATAACAATTGCACTGGAGGCCAAGAAGTTAGAGACCTACTTTGTGTGCAATCTTTTAATGGCATCAAAGTGCTACCGCCTGTGTTGTCTGAGAATCAAATTTCTGGTTATACAGCGGGAGCTACTGTATCTGCTATGTTCCCATGGTCTGCAGCTGCAGGTGTGCCATTTTCTTTAAGTGTTCAATATAGAATTAATGGTCTTGGTGTCACTATGAATGTTCTTAGTGAAAATCAGAAAATGATAGCAAGTGCATTTAACAACGCGATAGGTGCTATACAGGAAGGGTTTGCTGCAACCAATTCTGCCTTAGCAAAAATGCAGTTCGTTGTCAATGCAAATGCGGAAGCACTCAATAATTTATTAAACCAGCTTTCCAATAGGTTTGGTGCAATTAGTGCTTCTTTACAAGAAATTCTATCTCGCCTAGATGCTCTTGAAGCGCAGGCTCAGATAGACCGTCTTATTAATGGCAGATTAACTGCACTTAATGCATATGTCTCTAAGCAGCTGAGTGACATGACCCTTGTTAAGGTGAGTGCAGCCCAGGCTATAGAGAAAGTTAATGAGTGTGTTAAAAGCCAATCATCTAGGATAAATTTCTGTGGCAATGGCAATCATATATTGTCATTAGTCCAGAATGCGCCTTATGGTTTATATTTTATTCATTTCAGCTATGTGCCTACTTCCTTTACAACGGCAAATGTGAGTCCTGGGCTATGCATTTCTGGTGATAGAGGATTAGCACCTAAAGCTGGATATTTTGTTCAAGATGATGGAGAGTGGAAGTTCACAGGTAGTAATTATTATTACCCTGAACCCATTACAGATAAAAATAGTGTCGTGATGAGTAGTTGCGCAGCAAACTACACAAAGGCACCTGAAGTTTTCTTGAACACTTCAATACCTAATCTACCCGACTTTAAGGAGGAGTTAGATAAATGGTTTAAAAATCAGACGTCTATTGCGCCTGATTTATCTCTCGATTTCGAGAAATTAAACGTTACCCTCCTGGACCTGACTGATGAGATGAACAGGATTCAGGATGCAATTAAGAAGTTAAATGAGAGTTACATCAACCTCAAGGACGTTGGCACATATGAAATGTATGTGAAATGGCCTTGGTATGTGTGGTTGCTAATTGGATTAGCTGGTGTAGCTGTTTGTGTGTTGTTATTTTTCATATGTTGCTGCACGGGTTGTGGCTCATGTTGTTTCAAGAAGTGTGGAAATTGTTGTGATGAGTGTGGAGGACACCAGGACAGTATTGTGATACATAATATTTCCTCTCATGAGGATTGA |