Protein Id: YP_009639960.1 |
Length: 340 aa |
Description: spike Enterobacteria phage PRD1. |
Molecule type: linear |
Data category: PHG |
Date: 4-Jun-19 |
Source: Enterobacteria phage PRD1 |
Class virus: phage |
Virus name: Enterobacteria phage |
Host: -- |
Authors: Saren;A.M.; Ravantti;J.J.; Benson;S.D.; Burnett;R.M.; Paulin;L.; Bamford;D.H. and Bamford;J.K. |
Title: A snapshot of viral evolution from genome analysis of the tectiviridae family |
Journal: J Mol Biol 350 (3); 427-440 (2005) |
Taxonomy: Enterobacteria phage PRD1 Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Kalamavirales; Tectiviridae; Alphatectivirus. |
db_xref: """taxon:10658, CDD:370204, CDD:312491, GeneID:1260939""" |
Sequence: MANQQIGGSTVTYNGAIPMGGPVAINSVIEIAGTEVLVDLKLDYATGKISGVQTLYIDLRDFLGDVTVTMPDTGQRITARAGTQGYYPVLSTNLMKFIVSATIDGKFPMNFINFPIALGVWPSGIKGDKGDPGAPGPAGGTVVVEDSGASFGESLLDTTSEPGKILVKRISGGSGITVTDYGDQVEIEASGGGGGGGGVTDALSLMYSTSTGGPASIAANALTDFDLSGALTVNSVGTGLTKSAAGIQLAAGKSGLYQITMTVKNNTVTTGNYLLRVKYGSSDFVVACPASSLTAGGTISLLIYCNVLGVPSLDVLKFSLCNDGAALSNYIINITAAKIN |
Nucleotide
Nucleotide_Id: NC_001421.2 |
Length: 1023bp |
Description: Enterobacteria phage PRD1; complete genome |
Source: Enterobacteria phage PRD1 |
Nucleotide_type: DNA |
Molecule type: linear |
Data category: PHG |
Date: 4-Jun-19 |
Class virus: phage |
Virus name: Enterobacteria phage |
CDS: NC_001421.2:5287..6309 |
Host: -- |
Authors: Saren;A.M.; Ravantti;J.J.; Benson;S.D.; Burnett;R.M.; Paulin;L.; Bamford;D.H. and Bamford;J.K. |
Journal: J Mol Biol 350 (3); 427-440 (2005) |
Title: A snapshot of viral evolution from genome analysis of the tectiviridae family |
db_xref: taxon:10658; GeneID:1260933; GeneID:1260933; GeneID:1260934; GeneID:1260934; GeneID:1260935; GeneID:1260935; GeneID:1260937; GeneID:1260937; GeneID:1260938; GeneID:1260938; GeneID:1260939; GeneID:1260939; GeneID:1260940; GeneID:1260940; GeneID:5729503; GeneID:5729503; GeneID:1260941; GeneID:1260941; GeneID:5729509; GeneID:5729509; GeneID:1260942; GeneID:1260942; GeneID:1260944; GeneID:1260944; GeneID:1260945; GeneID:1260945; GeneID:1260932; GeneID:1260932; GeneID:1260947; GeneID:1260947; GeneID:5729507; GeneID:5729507; GeneID:5729508; GeneID:5729508; GeneID:1260946; GeneID:1260946; GeneID:5729501; GeneID:5729501; GeneID:1260927; GeneID:1260927; GeneID:1260943; GeneID:1260943; GeneID:5729500; GeneID:5729500; GeneID:1260930; GeneID:1260930; GeneID:1260929; GeneID:1260929; GeneID:1260931; GeneID:1260931; GeneID:5729506; GeneID:5729506; GeneID:5729504; GeneID:5729504; GeneID:5729505; GeneID:5729505; GeneID:5729502; GeneID:5729502; GeneID:1260936; GeneID:1260936; GeneID:1260928; GeneID:1260928 |
Taxonomy: Enterobacteria phage PRD1 Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Kalamavirales; Tectiviridae; Alphatectivirus. |
Features: SeqFeature(FeatureLocation(ExactPosition(0); ExactPosition(14927); strand=1); type='source'); SeqFeature(FeatureLocation(ExactPosition(232); ExactPosition(1012); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(232); ExactPosition(1012); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(1015); ExactPosition(2677); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(1015); ExactPosition(2677); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(2678); ExactPosition(3128); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(2678); ExactPosition(3128); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(3127); ExactPosition(4903); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(3127); ExactPosition(4903); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(4906); ExactPosition(5287); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(4906); ExactPosition(5287); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(5286); ExactPosition(6309); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(5286); ExactPosition(6309); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6327); ExactPosition(6588); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(6327); ExactPosition(6588); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6577); ExactPosition(6784); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(6577); ExactPosition(6784); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(6783); ExactPosition(7284); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(6783); ExactPosition(7284); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(7028); ExactPosition(7640); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(7028); ExactPosition(7640); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(7636); ExactPosition(8320); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(7636); ExactPosition(8320); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8331); ExactPosition(8460); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(8331); ExactPosition(8460); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8459); ExactPosition(8588); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(8459); ExactPosition(8588); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(8594); ExactPosition(9782); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(8594); ExactPosition(9782); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(9800); ExactPosition(9944); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(9800); ExactPosition(9944); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(9954); ExactPosition(10038); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(9954); ExactPosition(10038); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(10043); ExactPosition(10166); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(10043); ExactPosition(10166); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(10167); ExactPosition(10440); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(10167); ExactPosition(10440); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(10439); ExactPosition(10604); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(10439); ExactPosition(10604); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(10616); ExactPosition(10823); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(10616); ExactPosition(10823); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(10832); ExactPosition(11087); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(10832); ExactPosition(11087); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11089); ExactPosition(11200); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(11089); ExactPosition(11200); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11201); ExactPosition(11825); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(11201); ExactPosition(11825); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(11835); ExactPosition(12189); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(11835); ExactPosition(12189); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(12189); ExactPosition(12987); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(12189); ExactPosition(12987); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(12534); ExactPosition(12987); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(12534); ExactPosition(12987); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(12983); ExactPosition(13337); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(12983); ExactPosition(13337); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(13329); ExactPosition(13692); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(13329); ExactPosition(13692); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(13615); ExactPosition(13888); strand=1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(13615); ExactPosition(13888); strand=1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(13847); ExactPosition(14132); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(13847); ExactPosition(14132); strand=-1); type='CDS'); SeqFeature(FeatureLocation(ExactPosition(14204); ExactPosition(14687); strand=-1); type='gene'); SeqFeature(FeatureLocation(ExactPosition(14204); ExactPosition(14687); strand=-1); type='CDS') |
Sequence: ATGGCTAATCAACAAATCGGCGGCAGCACGGTAACTTATAACGGCGCTATCCCTATGGGTGGCCCGGTGGCTATTAATTCCGTTATCGAAATTGCCGGTACGGAAGTTTTAGTAGATTTGAAACTTGACTATGCAACCGGCAAAATTTCGGGCGTTCAAACTCTTTATATCGACTTGCGCGATTTTTTGGGTGACGTAACCGTAACCATGCCGGACACCGGGCAGCGCATTACGGCGCGGGCAGGTACGCAAGGTTATTACCCGGTGCTATCCACTAACCTTATGAAATTCATTGTATCCGCCACTATTGACGGAAAATTCCCAATGAATTTTATTAACTTCCCTATTGCGCTTGGCGTATGGCCTAGCGGAATTAAAGGCGATAAAGGCGACCCCGGCGCACCCGGCCCCGCTGGTGGCACGGTTGTTGTTGAAGATTCCGGCGCGTCATTTGGTGAAAGCCTGTTAGATACCACAAGCGAACCGGGCAAAATTCTGGTTAAAAGAATTTCCGGGGGTAGCGGCATTACCGTTACTGATTATGGCGATCAAGTAGAAATTGAAGCCAGCGGCGGCGGTGGCGGCGGTGGCGGTGTAACTGATGCGCTTTCATTAATGTATTCGACCAGTACGGGCGGGCCTGCAAGTATTGCGGCCAATGCGCTTACTGATTTTGATTTGTCCGGCGCTTTGACTGTAAATAGCGTTGGCACTGGTTTGACAAAATCGGCGGCGGGTATTCAATTAGCGGCGGGTAAATCCGGGCTTTATCAAATTACCATGACGGTAAAAAATAATACCGTGACAACGGGAAATTATTTATTGCGCGTTAAATACGGTAGTAGTGATTTTGTTGTTGCCTGCCCTGCCAGTAGCCTGACCGCTGGCGGTACAATTTCGCTACTGATTTATTGCAACGTGTTAGGCGTTCCAAGCCTTGACGTGCTAAAATTCAGTTTGTGTAATGACGGGGCAGCGCTTAGTAATTACATTATTAATATCACTGCCGCAAAAATTAATTAA |